RNA–Protein interactions for RNA: ENST00000474627.7

ATPAF2-206, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF2, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-206ENST00000474627 CICQ96RK0 1608 aaPredicted RBP25.45■■□□□ 1.66
ATPAF2-206ENST00000474627 STARD3NLO95772 234 aa25.44■■□□□ 1.66
ATPAF2-206ENST00000474627 TEX13AQ9BXU3 409 aaPredicted RBP25.44■■□□□ 1.66
ATPAF2-206ENST00000474627 UBR3Q6ZT12 1888 aa25.44■■□□□ 1.66
ATPAF2-206ENST00000474627 LRP5O75197 1615 aa25.44■■□□□ 1.66
ATPAF2-206ENST00000474627 TRAPPC3LQ5T215 181 aa25.44■■□□□ 1.66
ATPAF2-206ENST00000474627 TSPYL4Q9UJ04 414 aa25.44■■□□□ 1.66
ATPAF2-206ENST00000474627 PRAMEF22A3QJZ6 481 aa25.42■■□□□ 1.66
ATPAF2-206ENST00000474627 SNRPA1P09661 255 aaKnown RBP25.42■■□□□ 1.66
ATPAF2-206ENST00000474627 PTGER2P43116 358 aa25.42■■□□□ 1.66
ATPAF2-206ENST00000474627 MYH14Q7Z406 1995 aaKnown RBP25.41■■□□□ 1.66
ATPAF2-206ENST00000474627 ARHGEF1Q92888 912 aaKnown RBP25.41■■□□□ 1.66
ATPAF2-206ENST00000474627 LAS1LQ9Y4W2 734 aaKnown RBP25.41■■□□□ 1.66
ATPAF2-206ENST00000474627 ADRA2BP18089 450 aa25.4■■□□□ 1.66
ATPAF2-206ENST00000474627 MSL1Q68DK7 614 aa25.4■■□□□ 1.66
ATPAF2-206ENST00000474627 ZBTB1Q9Y2K1 713 aa25.4■■□□□ 1.66
ATPAF2-206ENST00000474627 EIF4A1P60842 406 aaKnown RBP25.39■■□□□ 1.66
ATPAF2-206ENST00000474627 BABAM1Q9NWV8 329 aa25.39■■□□□ 1.66
ATPAF2-206ENST00000474627 USP16Q9Y5T5 823 aa25.39■■□□□ 1.66
ATPAF2-206ENST00000474627 CANXP27824 592 aaKnown RBP25.39■■□□□ 1.65
ATPAF2-206ENST00000474627 SGIP1Q9BQI5 828 aa25.39■■□□□ 1.65
ATPAF2-206ENST00000474627 PPP1R1BQ9UD71 204 aaPredicted RBP25.39■■□□□ 1.65
ATPAF2-206ENST00000474627 RFC4P35249 363 aa25.38■■□□□ 1.65
ATPAF2-206ENST00000474627 KDM3BQ7LBC6 1761 aa25.38■■□□□ 1.65
ATPAF2-206ENST00000474627 CHL1O00533 1208 aa25.37■■□□□ 1.65
ATPAF2-206ENST00000474627 ERICH6BQ5W0A0 696 aa25.37■■□□□ 1.65
ATPAF2-206ENST00000474627 NGEFQ8N5V2 710 aa25.37■■□□□ 1.65
ATPAF2-206ENST00000474627 SOS1Q07889 1333 aaPredicted RBP25.36■■□□□ 1.65
ATPAF2-206ENST00000474627 A1BGP04217 495 aa25.36■■□□□ 1.65
ATPAF2-206ENST00000474627 GIGYF1O75420 1035 aaPredicted RBP25.35■■□□□ 1.65
ATPAF2-206ENST00000474627 POLD1P28340 1107 aa25.35■■□□□ 1.65
ATPAF2-206ENST00000474627 CALD1Q05682 793 aaKnown RBP25.35■■□□□ 1.65
ATPAF2-206ENST00000474627 FKBP8Q14318 412 aa25.35■■□□□ 1.65
ATPAF2-206ENST00000474627 CFAP44Q96MT7 982 aa25.34■■□□□ 1.65
ATPAF2-206ENST00000474627 SALL2Q9Y467 1007 aaPredicted RBP25.34■■□□□ 1.65
ATPAF2-206ENST00000474627 CCDC27Q2M243 656 aa25.33■■□□□ 1.65
ATPAF2-206ENST00000474627 WWC1Q8IX03 1113 aa25.32■■□□□ 1.64
ATPAF2-206ENST00000474627 ARXQ96QS3 562 aa25.32■■□□□ 1.64
ATPAF2-206ENST00000474627 SRP68Q9UHB9 627 aaKnown RBP25.32■■□□□ 1.64
ATPAF2-206ENST00000474627 ZNF330Q9Y3S2 320 aaPredicted RBP25.32■■□□□ 1.64
ATPAF2-206ENST00000474627 COL15A1P39059 1388 aa25.32■■□□□ 1.64
ATPAF2-206ENST00000474627 PIP4K2AP48426 406 aaPredicted RBP25.31■■□□□ 1.64
ATPAF2-206ENST00000474627 EIF5P55010 431 aaKnown RBP25.31■■□□□ 1.64
ATPAF2-206ENST00000474627 IFT57Q9NWB7 429 aa25.31■■□□□ 1.64
ATPAF2-206ENST00000474627 USP42Q9H9J4 1324 aaKnown RBP25.3■■□□□ 1.64
ATPAF2-206ENST00000474627 ZNF853P0CG23 659 aa25.3■■□□□ 1.64
ATPAF2-206ENST00000474627 GYS1P13807 737 aa25.3■■□□□ 1.64
ATPAF2-206ENST00000474627 IL6STP40189 918 aaPredicted RBP25.3■■□□□ 1.64
ATPAF2-206ENST00000474627 GNAI1P63096 354 aa25.3■■□□□ 1.64
ATPAF2-206ENST00000474627 NCBP3Q53F19 620 aaKnown RBP25.3■■□□□ 1.64
ATPAF2-206ENST00000474627 MBIPQ9NS73 344 aa25.3■■□□□ 1.64
ATPAF2-206ENST00000474627 ZPR1O75312 459 aa25.29■■□□□ 1.64
ATPAF2-206ENST00000474627 KRT24Q2M2I5 525 aa25.28■■□□□ 1.64
ATPAF2-206ENST00000474627 NPM2Q86SE8 214 aaKnown RBP25.28■■□□□ 1.64
ATPAF2-206ENST00000474627 NLGN1Q8N2Q7 840 aa25.28■■□□□ 1.64
ATPAF2-206ENST00000474627 COL24A1Q17RW2 1714 aa25.27■■□□□ 1.64
ATPAF2-206ENST00000474627 A0A087WZG4 1122 aa25.27■■□□□ 1.64
ATPAF2-206ENST00000474627 USPL1Q5W0Q7 1092 aa25.27■■□□□ 1.64
ATPAF2-206ENST00000474627 NARFQ9UHQ1 456 aa25.27■■□□□ 1.64
ATPAF2-206ENST00000474627 RNF123Q5XPI4 1314 aa25.27■■□□□ 1.64
ATPAF2-206ENST00000474627 C4AP0C0L4 1744 aa25.27■■□□□ 1.64
ATPAF2-206ENST00000474627 NBPF26B4DH59 902 aa25.27■■□□□ 1.64
ATPAF2-206ENST00000474627 NBPF10Q6P3W6 841 aaKnown RBP25.27■■□□□ 1.64
ATPAF2-206ENST00000474627 NBPF15Q8N660 670 aa25.27■■□□□ 1.64
ATPAF2-206ENST00000474627 EIF2S2P20042 333 aaKnown RBP25.25■■□□□ 1.63
ATPAF2-206ENST00000474627 FHDC1Q9C0D6 1143 aaPredicted RBP25.25■■□□□ 1.63
ATPAF2-206ENST00000474627 TBC1D2BQ9UPU7 963 aa25.25■■□□□ 1.63
ATPAF2-206ENST00000474627 MMP10P09238 476 aa25.24■■□□□ 1.63
ATPAF2-206ENST00000474627 KLHL34Q8N239 644 aa25.24■■□□□ 1.63
ATPAF2-206ENST00000474627 LAMB4A4D0S4 1761 aa25.23■■□□□ 1.63
ATPAF2-206ENST00000474627 ZNF521Q96K83 1311 aa25.22■■□□□ 1.63
ATPAF2-206ENST00000474627 NECTIN2Q92692 538 aa25.22■■□□□ 1.63
ATPAF2-206ENST00000474627 MYL6BP14649 208 aa25.21■■□□□ 1.63
ATPAF2-206ENST00000474627 DZIP3Q86Y13 1208 aaKnown RBP25.21■■□□□ 1.63
ATPAF2-206ENST00000474627 WDR63Q8IWG1 891 aa25.21■■□□□ 1.63
ATPAF2-206ENST00000474627 TSR2Q969E8 191 aaKnown RBP25.21■■□□□ 1.63
ATPAF2-206ENST00000474627 BCL2L12Q9HB09 334 aa25.21■■□□□ 1.63
ATPAF2-206ENST00000474627 IL16Q14005 1332 aa25.21■■□□□ 1.63
ATPAF2-206ENST00000474627 DUSP27Q5VZP5 1158 aa25.2■■□□□ 1.62
ATPAF2-206ENST00000474627 SYT17Q9BSW7 474 aa25.2■■□□□ 1.62
ATPAF2-206ENST00000474627 ERBB4Q15303 1308 aa25.18■■□□□ 1.62
ATPAF2-206ENST00000474627 ELL2O00472 640 aaPredicted RBP25.18■■□□□ 1.62
ATPAF2-206ENST00000474627 CAMTA2O94983 1202 aa25.18■■□□□ 1.62
ATPAF2-206ENST00000474627 HOXB7P09629 217 aa25.18■■□□□ 1.62
ATPAF2-206ENST00000474627 PELP1Q8IZL8 1130 aaKnown RBP25.18■■□□□ 1.62
ATPAF2-206ENST00000474627 PARP3Q9Y6F1 533 aa25.18■■□□□ 1.62
ATPAF2-206ENST00000474627 TM4SF1P30408 202 aa25.17■■□□□ 1.62
ATPAF2-206ENST00000474627 PDIA6Q15084 440 aa25.17■■□□□ 1.62
ATPAF2-206ENST00000474627 C8orf58Q8NAV2 365 aa25.17■■□□□ 1.62
ATPAF2-206ENST00000474627 HDGFL1Q5TGJ6 251 aa25.16■■□□□ 1.62
ATPAF2-206ENST00000474627 ANXA1P04083 346 aa25.15■■□□□ 1.62
ATPAF2-206ENST00000474627 DDR1Q08345 913 aa25.15■■□□□ 1.62
ATPAF2-206ENST00000474627 NFIXQ14938 502 aa25.15■■□□□ 1.62
ATPAF2-206ENST00000474627 PROSER3Q2NL68 480 aa25.14■■□□□ 1.62
ATPAF2-206ENST00000474627 BICDL1Q6ZP65 573 aa25.14■■□□□ 1.62
ATPAF2-206ENST00000474627 GOLGA2Q08379 1002 aa25.14■■□□□ 1.61
ATPAF2-206ENST00000474627 SPINK5Q9NQ38 1064 aaPredicted RBP25.14■■□□□ 1.61
ATPAF2-206ENST00000474627 POLRMTO00411 1230 aaKnown RBP25.13■■□□□ 1.61
ATPAF2-206ENST00000474627 TBC1D9BQ66K14 1250 aa25.13■■□□□ 1.61
ATPAF2-206ENST00000474627 CD2APQ9Y5K6 639 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms