RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 ERBB4Q15303 1308 aa26.95■■□□□ 1.91
CCM2-206ENST00000474617 ADCY9O60503 1353 aa26.95■■□□□ 1.9
CCM2-206ENST00000474617 SNRPA1P09661 255 aaKnown RBP26.95■■□□□ 1.9
CCM2-206ENST00000474617 TTC22Q5TAA0 569 aa26.95■■□□□ 1.9
CCM2-206ENST00000474617 IL2RBP14784 551 aa26.94■■□□□ 1.9
CCM2-206ENST00000474617 HSP90AB4PQ58FF6 505 aa26.94■■□□□ 1.9
CCM2-206ENST00000474617 NFATC2IPQ8NCF5 419 aa26.94■■□□□ 1.9
CCM2-206ENST00000474617 SSH3Q8TE77 659 aa26.94■■□□□ 1.9
CCM2-206ENST00000474617 RBM25P49756 843 aaKnown RBP26.93■■□□□ 1.9
CCM2-206ENST00000474617 CABP4P57796 275 aa26.93■■□□□ 1.9
CCM2-206ENST00000474617 CASC1Q6TDU7 716 aa26.93■■□□□ 1.9
CCM2-206ENST00000474617 LRRCC1Q9C099 1032 aa26.93■■□□□ 1.9
CCM2-206ENST00000474617 LRRFIP2Q9Y608 721 aaKnown RBP26.93■■□□□ 1.9
CCM2-206ENST00000474617 COL22A1Q8NFW1 1626 aaPredicted RBP26.92■■□□□ 1.9
CCM2-206ENST00000474617 LINS1Q8NG48 757 aa26.91■■□□□ 1.9
CCM2-206ENST00000474617 MTX1Q13505 466 aa26.9■■□□□ 1.9
CCM2-206ENST00000474617 AOX1Q06278 1338 aa26.9■■□□□ 1.9
CCM2-206ENST00000474617 COL14A1Q05707 1796 aaKnown RBP26.9■■□□□ 1.9
CCM2-206ENST00000474617 MFAP1P55081 439 aaKnown RBP26.9■■□□□ 1.9
CCM2-206ENST00000474617 EVA1CP58658 441 aa26.9■■□□□ 1.9
CCM2-206ENST00000474617 POLA2Q14181 598 aa26.9■■□□□ 1.9
CCM2-206ENST00000474617 USP35Q9P2H5 1018 aa26.9■■□□□ 1.9
CCM2-206ENST00000474617 LAMB4A4D0S4 1761 aa26.89■■□□□ 1.9
CCM2-206ENST00000474617 LARP1Q6PKG0 1096 aaKnown RBP26.89■■□□□ 1.89
CCM2-206ENST00000474617 MAP3K2Q9Y2U5 619 aa26.88■■□□□ 1.89
CCM2-206ENST00000474617 UTYO14607 1347 aa26.88■■□□□ 1.89
CCM2-206ENST00000474617 C5P01031 1676 aa26.87■■□□□ 1.89
CCM2-206ENST00000474617 NEXNQ0ZGT2 675 aa26.86■■□□□ 1.89
CCM2-206ENST00000474617 PDIA6Q15084 440 aa26.86■■□□□ 1.89
CCM2-206ENST00000474617 TBC1D9Q6ZT07 1266 aa26.86■■□□□ 1.89
CCM2-206ENST00000474617 ZNF496Q96IT1 587 aaPredicted RBP26.85■■□□□ 1.89
CCM2-206ENST00000474617 PNMA6EA0A0J9YXQ4 647 aa26.85■■□□□ 1.89
CCM2-206ENST00000474617 GSPT1P15170 499 aaKnown RBP26.85■■□□□ 1.89
CCM2-206ENST00000474617 C9orf78Q9NZ63 289 aaPredicted RBP26.84■■□□□ 1.89
CCM2-206ENST00000474617 STAP2Q9UGK3 403 aa26.84■■□□□ 1.89
CCM2-206ENST00000474617 ROBO1Q9Y6N7 1651 aa26.84■■□□□ 1.89
CCM2-206ENST00000474617 PAPPAQ13219 1627 aa26.83■■□□□ 1.89
CCM2-206ENST00000474617 SLC39A6Q13433 755 aa26.83■■□□□ 1.89
CCM2-206ENST00000474617 UBR2Q8IWV8 1755 aa26.83■■□□□ 1.89
CCM2-206ENST00000474617 SALL3Q9BXA9 1300 aa26.82■■□□□ 1.88
CCM2-206ENST00000474617 PDE1AP54750 535 aa26.82■■□□□ 1.88
CCM2-206ENST00000474617 PROSER3Q2NL68 480 aa26.82■■□□□ 1.88
CCM2-206ENST00000474617 PPP1R42Q7Z4L9 355 aa26.82■■□□□ 1.88
CCM2-206ENST00000474617 KIF1BPQ96EK5 621 aa26.81■■□□□ 1.88
CCM2-206ENST00000474617 EXOC6BQ9Y2D4 811 aa26.81■■□□□ 1.88
CCM2-206ENST00000474617 RIC3Q7Z5B4 369 aa26.8■■□□□ 1.88
CCM2-206ENST00000474617 ERC1Q8IUD2 1116 aa26.8■■□□□ 1.88
CCM2-206ENST00000474617 SHANK3Q9BYB0 1731 aa26.8■■□□□ 1.88
CCM2-206ENST00000474617 COL15A1P39059 1388 aa26.8■■□□□ 1.88
CCM2-206ENST00000474617 LTBP4Q8N2S1 1624 aa26.8■■□□□ 1.88
CCM2-206ENST00000474617 GRM8O00222 908 aa26.8■■□□□ 1.88
CCM2-206ENST00000474617 SRGAP3O43295 1099 aa26.8■■□□□ 1.88
CCM2-206ENST00000474617 NBPF7P0C2Y1 421 aaPredicted RBP26.8■■□□□ 1.88
CCM2-206ENST00000474617 PLCH1Q4KWH8 1693 aa26.79■■□□□ 1.88
CCM2-206ENST00000474617 TNS2Q63HR2 1409 aa26.79■■□□□ 1.88
CCM2-206ENST00000474617 ANXA1P04083 346 aa26.79■■□□□ 1.88
CCM2-206ENST00000474617 MX1P20591 662 aa26.79■■□□□ 1.88
CCM2-206ENST00000474617 C16orf71Q8IYS4 520 aaPredicted RBP26.79■■□□□ 1.88
CCM2-206ENST00000474617 METTL22Q9BUU2 404 aaPredicted RBP26.79■■□□□ 1.88
CCM2-206ENST00000474617 GLI3P10071 1580 aa26.78■■□□□ 1.88
CCM2-206ENST00000474617 SMARCA5O60264 1052 aaPredicted RBP26.78■■□□□ 1.88
CCM2-206ENST00000474617 RTL5Q5HYW3 569 aaPredicted RBP26.78■■□□□ 1.88
CCM2-206ENST00000474617 SNX21Q969T3 373 aa26.78■■□□□ 1.88
CCM2-206ENST00000474617 STRN4Q9NRL3 753 aa26.78■■□□□ 1.88
CCM2-206ENST00000474617 PRAMEF22A3QJZ6 481 aa26.77■■□□□ 1.88
CCM2-206ENST00000474617 SDSP20132 328 aa26.77■■□□□ 1.88
CCM2-206ENST00000474617 SURF6O75683 361 aaKnown RBP26.76■■□□□ 1.87
CCM2-206ENST00000474617 REC8O95072 547 aa26.76■■□□□ 1.87
CCM2-206ENST00000474617 ANKRD13DQ6ZTN6 518 aa26.76■■□□□ 1.87
CCM2-206ENST00000474617 LRP10Q7Z4F1 713 aa26.76■■□□□ 1.87
CCM2-206ENST00000474617 LRP6O75581 1613 aa26.76■■□□□ 1.87
CCM2-206ENST00000474617 APBB1O00213 710 aa26.75■■□□□ 1.87
CCM2-206ENST00000474617 IL27Q8NEV9 243 aa26.75■■□□□ 1.87
CCM2-206ENST00000474617 XAGE3Q8WTP9 111 aa26.75■■□□□ 1.87
CCM2-206ENST00000474617 CDCA7Q9BWT1 371 aaPredicted RBP26.75■■□□□ 1.87
CCM2-206ENST00000474617 TEX13AQ9BXU3 409 aaPredicted RBP26.75■■□□□ 1.87
CCM2-206ENST00000474617 DISP2A7MBM2 1401 aa26.74■■□□□ 1.87
CCM2-206ENST00000474617 EPB41L2O43491 1005 aaKnown RBP26.74■■□□□ 1.87
CCM2-206ENST00000474617 COPS6Q7L5N1 327 aa26.74■■□□□ 1.87
CCM2-206ENST00000474617 OTUD7AQ8TE49 926 aaPredicted RBP26.74■■□□□ 1.87
CCM2-206ENST00000474617 KCPQ6ZWJ8 1503 aa26.74■■□□□ 1.87
CCM2-206ENST00000474617 HSCBQ8IWL3 235 aa26.73■■□□□ 1.87
CCM2-206ENST00000474617 PLBD2Q8NHP8 589 aa26.73■■□□□ 1.87
CCM2-206ENST00000474617 RHPN1Q8TCX5 695 aa26.73■■□□□ 1.87
CCM2-206ENST00000474617 TBC1D2Q9BYX2 928 aa26.73■■□□□ 1.87
CCM2-206ENST00000474617 BTG4Q9NY30 223 aa26.73■■□□□ 1.87
CCM2-206ENST00000474617 USP16Q9Y5T5 823 aa26.73■■□□□ 1.87
CCM2-206ENST00000474617 NEURL1BA8MQ27 555 aa26.72■■□□□ 1.87
CCM2-206ENST00000474617 VSIG10Q8N0Z9 540 aa26.72■■□□□ 1.87
CCM2-206ENST00000474617 USP42Q9H9J4 1324 aaKnown RBP26.72■■□□□ 1.87
CCM2-206ENST00000474617 AIMP1Q12904 312 aaKnown RBP26.71■■□□□ 1.87
CCM2-206ENST00000474617 MYL6BP14649 208 aa26.7■■□□□ 1.87
CCM2-206ENST00000474617 GCKRQ14397 625 aa26.7■■□□□ 1.87
CCM2-206ENST00000474617 TTC41PQ6P2S7 1318 aa26.7■■□□□ 1.87
CCM2-206ENST00000474617 TUBGCP6Q96RT7 1819 aa26.7■■□□□ 1.86
CCM2-206ENST00000474617 SLC4A3P48751 1232 aa26.7■■□□□ 1.86
CCM2-206ENST00000474617 TMOD3Q9NYL9 352 aa26.7■■□□□ 1.86
CCM2-206ENST00000474617 ERC2O15083 957 aa26.69■■□□□ 1.86
CCM2-206ENST00000474617 IGKV5-2P06315 115 aa26.69■■□□□ 1.86
CCM2-206ENST00000474617 CWF19L2Q2TBE0 894 aaKnown RBP26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms