RNA–Protein interactions for RNA: ENST00000474323.5

SAMM50-203, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 2,368 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-203ENST00000474323 CTIFO43310 598 aaKnown RBP17.53■□□□□ 0.4
SAMM50-203ENST00000474323 TPM3P06753 285 aa17.53■□□□□ 0.4
SAMM50-203ENST00000474323 IL13P35225 146 aa17.53■□□□□ 0.4
SAMM50-203ENST00000474323 C16orf71Q8IYS4 520 aaPredicted RBP17.53■□□□□ 0.4
SAMM50-203ENST00000474323 PIK3C2AO00443 1686 aa17.53■□□□□ 0.4
SAMM50-203ENST00000474323 FAM177BA6PVY3 158 aa17.53■□□□□ 0.4
SAMM50-203ENST00000474323 FCHSD2O94868 740 aa17.53■□□□□ 0.4
SAMM50-203ENST00000474323 GTF2E1P29083 439 aaPredicted RBP17.53■□□□□ 0.4
SAMM50-203ENST00000474323 NEK4P51957 841 aa17.53■□□□□ 0.4
SAMM50-203ENST00000474323 C17orf53Q8N3J3 647 aaPredicted RBP17.52■□□□□ 0.4
SAMM50-203ENST00000474323 KIAA1524Q8TCG1 905 aa17.52■□□□□ 0.4
SAMM50-203ENST00000474323 LRRC7Q96NW7 1537 aa17.52■□□□□ 0.4
SAMM50-203ENST00000474323 PRKAR2BP31323 418 aa17.52■□□□□ 0.39
SAMM50-203ENST00000474323 NLRP6P59044 892 aa17.52■□□□□ 0.39
SAMM50-203ENST00000474323 CCDC183Q5T5S1 534 aa17.52■□□□□ 0.39
SAMM50-203ENST00000474323 MPNDQ8N594 471 aa17.52■□□□□ 0.39
SAMM50-203ENST00000474323 USP31Q70CQ4 1352 aa17.51■□□□□ 0.39
SAMM50-203ENST00000474323 KDM4AO75164 1064 aa17.51■□□□□ 0.39
SAMM50-203ENST00000474323 OGFRQ9NZT2 677 aa17.51■□□□□ 0.39
SAMM50-203ENST00000474323 RIOK3O14730 519 aaKnown RBP17.51■□□□□ 0.39
SAMM50-203ENST00000474323 U2AF2P26368 475 aaKnown RBP eCLIP17.51■□□□□ 0.393e-6■■■□□ 15.4
SAMM50-203ENST00000474323 USP48Q86UV5 1035 aa17.5■□□□□ 0.39
SAMM50-203ENST00000474323 ABTB2Q8N961 1025 aa17.5■□□□□ 0.39
SAMM50-203ENST00000474323 GADD45BO75293 160 aaPredicted RBP17.5■□□□□ 0.39
SAMM50-203ENST00000474323 RPAP2Q8IXW5 612 aaPredicted RBP17.5■□□□□ 0.39
SAMM50-203ENST00000474323 ANKRD44Q8N8A2 993 aa17.5■□□□□ 0.39
SAMM50-203ENST00000474323 TMEM87AQ8NBN3 555 aa17.5■□□□□ 0.39
SAMM50-203ENST00000474323 ORAI2Q96SN7 254 aa17.5■□□□□ 0.39
SAMM50-203ENST00000474323 TSPYL6Q8N831 410 aa17.49■□□□□ 0.39
SAMM50-203ENST00000474323 STRCP1A6NGW2 1772 aa17.49■□□□□ 0.39
SAMM50-203ENST00000474323 PEAK1Q9H792 1746 aa17.49■□□□□ 0.39
SAMM50-203ENST00000474323 MX1P20591 662 aa17.48■□□□□ 0.39
SAMM50-203ENST00000474323 GNAI1P63096 354 aa17.48■□□□□ 0.39
SAMM50-203ENST00000474323 SYCP1Q15431 976 aa17.48■□□□□ 0.39
SAMM50-203ENST00000474323 HSP90AB2PQ58FF8 381 aa17.48■□□□□ 0.39
SAMM50-203ENST00000474323 PSME1Q06323 249 aa17.48■□□□□ 0.39
SAMM50-203ENST00000474323 GABPB1Q06547 395 aaPredicted RBP17.48■□□□□ 0.39
SAMM50-203ENST00000474323 OTUD7AQ8TE49 926 aaPredicted RBP17.48■□□□□ 0.39
SAMM50-203ENST00000474323 IFT57Q9NWB7 429 aa17.48■□□□□ 0.39
SAMM50-203ENST00000474323 MAP3K19Q56UN5 1328 aa17.48■□□□□ 0.39
SAMM50-203ENST00000474323 WDR33Q9C0J8 1336 aaKnown RBP17.48■□□□□ 0.39
SAMM50-203ENST00000474323 EIF4A2Q14240 407 aaKnown RBP17.47■□□□□ 0.39
SAMM50-203ENST00000474323 PHACTR3Q96KR7 559 aa17.47■□□□□ 0.39
SAMM50-203ENST00000474323 TMEM51Q9NW97 253 aa17.47■□□□□ 0.39
SAMM50-203ENST00000474323 HCLS1P14317 486 aaPredicted RBP17.47■□□□□ 0.39
SAMM50-203ENST00000474323 LMTK3Q96Q04 1460 aa17.47■□□□□ 0.39
SAMM50-203ENST00000474323 ANAPC15P60006 121 aa17.46■□□□□ 0.39
SAMM50-203ENST00000474323 C19orf44Q9H6X5 657 aa17.46■□□□□ 0.39
SAMM50-203ENST00000474323 FOXO3O43524 673 aa17.46■□□□□ 0.39
SAMM50-203ENST00000474323 PAXIP1Q6ZW49 1069 aaPredicted RBP17.46■□□□□ 0.39
SAMM50-203ENST00000474323 ZNF771Q7L3S4 317 aaPredicted RBP17.46■□□□□ 0.39
SAMM50-203ENST00000474323 RTL1A6NKG5 1358 aa17.46■□□□□ 0.39
SAMM50-203ENST00000474323 TMEM94Q12767 1356 aa17.46■□□□□ 0.39
SAMM50-203ENST00000474323 GOLGA6L6A8MZA4 724 aa17.45■□□□□ 0.38
SAMM50-203ENST00000474323 HSP90B1P14625 803 aaKnown RBP17.45■□□□□ 0.38
SAMM50-203ENST00000474323 MCCP23508 829 aa17.45■□□□□ 0.38
SAMM50-203ENST00000474323 TWISTNBQ3B726 338 aaPredicted RBP17.45■□□□□ 0.38
SAMM50-203ENST00000474323 GDPD2Q9HCC8 539 aa17.45■□□□□ 0.38
SAMM50-203ENST00000474323 MARF1Q9Y4F3 1742 aaKnown RBP17.45■□□□□ 0.38
SAMM50-203ENST00000474323 ZNF853P0CG23 659 aa17.45■□□□□ 0.38
SAMM50-203ENST00000474323 NFE2L2Q16236 605 aa17.45■□□□□ 0.38
SAMM50-203ENST00000474323 OSBPL3Q9H4L5 887 aa17.45■□□□□ 0.38
SAMM50-203ENST00000474323 KCNF1Q9H3M0 494 aa17.44■□□□□ 0.38
SAMM50-203ENST00000474323 ATP10DQ9P241 1426 aa17.44■□□□□ 0.38
SAMM50-203ENST00000474323 AMPHP49418 695 aa17.44■□□□□ 0.38
SAMM50-203ENST00000474323 AEBP1Q8IUX7 1158 aa17.44■□□□□ 0.38
SAMM50-203ENST00000474323 PYCARDQ9ULZ3 195 aa17.44■□□□□ 0.38
SAMM50-203ENST00000474323 SMARCA5O60264 1052 aaPredicted RBP17.43■□□□□ 0.38
SAMM50-203ENST00000474323 UBE2HP62256 183 aa17.43■□□□□ 0.38
SAMM50-203ENST00000474323 MBIPQ9NS73 344 aa17.43■□□□□ 0.38
SAMM50-203ENST00000474323 ELL2O00472 640 aaPredicted RBP17.43■□□□□ 0.38
SAMM50-203ENST00000474323 CEP85Q6P2H3 762 aa17.43■□□□□ 0.38
SAMM50-203ENST00000474323 IL17RAQ96F46 866 aa17.43■□□□□ 0.38
SAMM50-203ENST00000474323 SBNO1A3KN83 1393 aa17.42■□□□□ 0.38
SAMM50-203ENST00000474323 SULT6B1Q6IMI4 303 aa17.42■□□□□ 0.38
SAMM50-203ENST00000474323 FUCA2Q9BTY2 467 aa17.42■□□□□ 0.38
SAMM50-203ENST00000474323 CGNQ9P2M7 1197 aaKnown RBP17.42■□□□□ 0.38
SAMM50-203ENST00000474323 CTNNA3Q9UI47 895 aa17.42■□□□□ 0.38
SAMM50-203ENST00000474323 STRCQ7RTU9 1775 aa17.42■□□□□ 0.38
SAMM50-203ENST00000474323 FLT4P35916 1363 aa17.42■□□□□ 0.38
SAMM50-203ENST00000474323 ATF3P18847 181 aa17.42■□□□□ 0.38
SAMM50-203ENST00000474323 NCBP1Q09161 790 aaKnown RBP17.42■□□□□ 0.38
SAMM50-203ENST00000474323 RGS12O14924 1447 aa17.41■□□□□ 0.38
SAMM50-203ENST00000474323 C1orf167Q5SNV9 1468 aa17.41■□□□□ 0.38
SAMM50-203ENST00000474323 FOXD4L6Q3SYB3 417 aaPredicted RBP17.4■□□□□ 0.38
SAMM50-203ENST00000474323 FOXD4L3Q6VB84 417 aaPredicted RBP17.4■□□□□ 0.38
SAMM50-203ENST00000474323 RPAP1Q9BWH6 1393 aaPredicted RBP17.4■□□□□ 0.38
SAMM50-203ENST00000474323 DDX41Q9UJV9 622 aaKnown RBP17.4■□□□□ 0.38
SAMM50-203ENST00000474323 LMOD2Q6P5Q4 547 aa17.39■□□□□ 0.38
SAMM50-203ENST00000474323 ESYT1Q9BSJ8 1104 aa17.39■□□□□ 0.38
SAMM50-203ENST00000474323 THUMPD2Q9BTF0 503 aaKnown RBP17.39■□□□□ 0.38
SAMM50-203ENST00000474323 SRCIN1Q9C0H9 1055 aa17.39■□□□□ 0.38
SAMM50-203ENST00000474323 USP54Q70EL1 1684 aa17.39■□□□□ 0.37
SAMM50-203ENST00000474323 TCHHQ07283 1943 aa17.39■□□□□ 0.37
SAMM50-203ENST00000474323 PDE1AP54750 535 aa17.39■□□□□ 0.37
SAMM50-203ENST00000474323 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.39■□□□□ 0.37
SAMM50-203ENST00000474323 C8orf58Q8NAV2 365 aa17.39■□□□□ 0.37
SAMM50-203ENST00000474323 MORC2Q9Y6X9 1032 aaPredicted RBP17.39■□□□□ 0.37
SAMM50-203ENST00000474323 SMTNL1A8MU46 457 aa17.38■□□□□ 0.37
SAMM50-203ENST00000474323 SLFN14P0C7P3 912 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms