RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 DDX58O95786 925 aaKnown RBP13.05□□□□□ -0.32
PRPF38A-202ENST00000474048 BRPF1P55201 1214 aaPredicted RBP13.05□□□□□ -0.32
PRPF38A-202ENST00000474048 FKBP5Q13451 457 aaPredicted RBP13.05□□□□□ -0.32
PRPF38A-202ENST00000474048 ARHGAP45Q92619 1136 aa13.05□□□□□ -0.32
PRPF38A-202ENST00000474048 HYPKQ9NX55 129 aa13.05□□□□□ -0.32
PRPF38A-202ENST00000474048 KCPQ6ZWJ8 1503 aa13.04□□□□□ -0.32
PRPF38A-202ENST00000474048 VSIG10Q8N0Z9 540 aa13.04□□□□□ -0.32
PRPF38A-202ENST00000474048 CLUAP1Q96AJ1 413 aa13.04□□□□□ -0.32
PRPF38A-202ENST00000474048 CHPF2Q9P2E5 772 aa13.04□□□□□ -0.32
PRPF38A-202ENST00000474048 ASAP1Q9ULH1 1129 aa13.04□□□□□ -0.32
PRPF38A-202ENST00000474048 ERBB4Q15303 1308 aa13.04□□□□□ -0.32
PRPF38A-202ENST00000474048 PALLDQ8WX93 1383 aa13.04□□□□□ -0.32
PRPF38A-202ENST00000474048 HMGB2P26583 209 aaKnown RBP13.03□□□□□ -0.32
PRPF38A-202ENST00000474048 ITPRIPQ8IWB1 547 aa13.03□□□□□ -0.32
PRPF38A-202ENST00000474048 ATG3Q9NT62 314 aa13.03□□□□□ -0.32
PRPF38A-202ENST00000474048 BTAF1O14981 1849 aa13.03□□□□□ -0.32
PRPF38A-202ENST00000474048 FLIIQ13045 1269 aa13.02□□□□□ -0.33
PRPF38A-202ENST00000474048 DDX21Q9NR30 783 aaKnown RBP eCLIP13.02□□□□□ -0.33
PRPF38A-202ENST00000474048 SBF2Q86WG5 1849 aa13.02□□□□□ -0.33
PRPF38A-202ENST00000474048 TRIM27P14373 513 aa13.01□□□□□ -0.33
PRPF38A-202ENST00000474048 MYL6BP14649 208 aa13.01□□□□□ -0.33
PRPF38A-202ENST00000474048 ATP6V1AP38606 617 aa13.01□□□□□ -0.33
PRPF38A-202ENST00000474048 FAM182BQ5T319 152 aa13.01□□□□□ -0.33
PRPF38A-202ENST00000474048 CRBNQ96SW2 442 aa13.01□□□□□ -0.33
PRPF38A-202ENST00000474048 DDX19BQ9UMR2 479 aa13.01□□□□□ -0.33
PRPF38A-202ENST00000474048 ZNF330Q9Y3S2 320 aaPredicted RBP13.01□□□□□ -0.33
PRPF38A-202ENST00000474048 RGS12O14924 1447 aa13□□□□□ -0.33
PRPF38A-202ENST00000474048 AAMPQ13685 434 aa13□□□□□ -0.33
PRPF38A-202ENST00000474048 SLC4A10Q6U841 1118 aa13□□□□□ -0.33
PRPF38A-202ENST00000474048 PANK1Q8TE04 598 aa13□□□□□ -0.33
PRPF38A-202ENST00000474048 BCL11BQ9C0K0 894 aaPredicted RBP13□□□□□ -0.33
PRPF38A-202ENST00000474048 COG6Q9Y2V7 657 aa13□□□□□ -0.33
PRPF38A-202ENST00000474048 LOC102724428A0A0B4J2F2 783 aa12.99□□□□□ -0.33
PRPF38A-202ENST00000474048 PRAMEF22A3QJZ6 481 aa12.99□□□□□ -0.33
PRPF38A-202ENST00000474048 KCNQ2O43526 872 aa12.99□□□□□ -0.33
PRPF38A-202ENST00000474048 CCT4P50991 539 aaKnown RBP12.99□□□□□ -0.33
PRPF38A-202ENST00000474048 SIK1P57059 783 aa12.99□□□□□ -0.33
PRPF38A-202ENST00000474048 NEXNQ0ZGT2 675 aa12.99□□□□□ -0.33
PRPF38A-202ENST00000474048 AIMP1Q12904 312 aaKnown RBP12.99□□□□□ -0.33
PRPF38A-202ENST00000474048 MVPQ14764 893 aaKnown RBP12.99□□□□□ -0.33
PRPF38A-202ENST00000474048 ARXQ96QS3 562 aa12.99□□□□□ -0.33
PRPF38A-202ENST00000474048 PPP4R2Q9NY27 417 aa12.99□□□□□ -0.33
PRPF38A-202ENST00000474048 USP16Q9Y5T5 823 aa12.99□□□□□ -0.33
PRPF38A-202ENST00000474048 C20orf194Q5TEA3 1177 aa12.98□□□□□ -0.33
PRPF38A-202ENST00000474048 KIF6Q6ZMV9 814 aa12.98□□□□□ -0.33
PRPF38A-202ENST00000474048 RIC3Q7Z5B4 369 aa12.98□□□□□ -0.33
PRPF38A-202ENST00000474048 DNAJC10Q8IXB1 793 aa12.98□□□□□ -0.33
PRPF38A-202ENST00000474048 EXOC6Q8TAG9 804 aa12.98□□□□□ -0.33
PRPF38A-202ENST00000474048 CCDC136Q96JN2 1154 aa12.98□□□□□ -0.33
PRPF38A-202ENST00000474048 PXDNLA1KZ92 1463 aa12.97□□□□□ -0.33
PRPF38A-202ENST00000474048 TJP1Q07157 1748 aa12.97□□□□□ -0.33
PRPF38A-202ENST00000474048 ABCC4O15439 1325 aa12.97□□□□□ -0.33
PRPF38A-202ENST00000474048 ZNF831Q5JPB2 1677 aa12.97□□□□□ -0.33
PRPF38A-202ENST00000474048 POTEAQ6S8J7 498 aa12.97□□□□□ -0.33
PRPF38A-202ENST00000474048 ILDR1Q86SU0 546 aaPredicted RBP12.97□□□□□ -0.33
PRPF38A-202ENST00000474048 PHAXQ9H814 394 aaKnown RBP12.97□□□□□ -0.33
PRPF38A-202ENST00000474048 CCNL1Q9UK58 526 aaPredicted RBP12.97□□□□□ -0.33
PRPF38A-202ENST00000474048 CICQ96RK0 1608 aaPredicted RBP12.96□□□□□ -0.33
PRPF38A-202ENST00000474048 TRIM37O94972 964 aa12.96□□□□□ -0.33
PRPF38A-202ENST00000474048 ANXA1P04083 346 aa12.96□□□□□ -0.33
PRPF38A-202ENST00000474048 SF3B2Q13435 895 aaKnown RBP12.96□□□□□ -0.33
PRPF38A-202ENST00000474048 G2E3Q7L622 706 aa12.96□□□□□ -0.33
PRPF38A-202ENST00000474048 TMEM57Q8N5G2 664 aa12.96□□□□□ -0.33
PRPF38A-202ENST00000474048 KSR2Q6VAB6 950 aa12.95□□□□□ -0.34
PRPF38A-202ENST00000474048 XAGE3Q8WTP9 111 aa12.95□□□□□ -0.34
PRPF38A-202ENST00000474048 DNAAF4Q8WXU2 420 aa12.95□□□□□ -0.34
PRPF38A-202ENST00000474048 CCDC87Q9NVE4 849 aa12.95□□□□□ -0.34
PRPF38A-202ENST00000474048 HDAC5Q9UQL6 1122 aa12.95□□□□□ -0.34
PRPF38A-202ENST00000474048 N4BP2Q86UW6 1770 aaPredicted RBP12.94□□□□□ -0.34
PRPF38A-202ENST00000474048 PI4KAP2A4QPH2 592 aa12.94□□□□□ -0.34
PRPF38A-202ENST00000474048 A1BGP04217 495 aa12.94□□□□□ -0.34
PRPF38A-202ENST00000474048 RLBP1P12271 317 aa12.94□□□□□ -0.34
PRPF38A-202ENST00000474048 PIP4K2AP48426 406 aaPredicted RBP12.94□□□□□ -0.34
PRPF38A-202ENST00000474048 COPS6Q7L5N1 327 aa12.94□□□□□ -0.34
PRPF38A-202ENST00000474048 PELP1Q8IZL8 1130 aaKnown RBP12.94□□□□□ -0.34
PRPF38A-202ENST00000474048 PI4KAP1Q8N8J0 262 aa12.94□□□□□ -0.34
PRPF38A-202ENST00000474048 SRCIN1Q9C0H9 1055 aa12.94□□□□□ -0.34
PRPF38A-202ENST00000474048 RGS17Q9UGC6 210 aaPredicted RBP12.94□□□□□ -0.34
PRPF38A-202ENST00000474048 LY75O60449 1722 aa12.93□□□□□ -0.34
PRPF38A-202ENST00000474048 F6X3S4 739 aa12.93□□□□□ -0.34
PRPF38A-202ENST00000474048 CYP19A1P11511 503 aaPredicted RBP12.93□□□□□ -0.34
PRPF38A-202ENST00000474048 CRKLP46109 303 aaKnown RBP12.93□□□□□ -0.34
PRPF38A-202ENST00000474048 PROSER3Q2NL68 480 aa12.93□□□□□ -0.34
PRPF38A-202ENST00000474048 INTS3Q68E01 1043 aaKnown RBP12.93□□□□□ -0.34
PRPF38A-202ENST00000474048 ANKRD13DQ6ZTN6 518 aa12.93□□□□□ -0.34
PRPF38A-202ENST00000474048 TNNQ9UQP3 1299 aa12.93□□□□□ -0.34
PRPF38A-202ENST00000474048 MAP3K2Q9Y2U5 619 aa12.93□□□□□ -0.34
PRPF38A-202ENST00000474048 COL5A3P25940 1745 aaPredicted RBP12.93□□□□□ -0.34
PRPF38A-202ENST00000474048 ARFGEF2Q9Y6D5 1785 aa12.92□□□□□ -0.34
PRPF38A-202ENST00000474048 A0A087WZG4 1122 aa12.92□□□□□ -0.34
PRPF38A-202ENST00000474048 APBA3O96018 575 aa12.92□□□□□ -0.34
PRPF38A-202ENST00000474048 GNAI3P08754 354 aa12.92□□□□□ -0.34
PRPF38A-202ENST00000474048 IL6STP40189 918 aaPredicted RBP12.92□□□□□ -0.34
PRPF38A-202ENST00000474048 PDIA6Q15084 440 aa12.92□□□□□ -0.34
PRPF38A-202ENST00000474048 SLC27A3Q5K4L6 730 aa12.92□□□□□ -0.34
PRPF38A-202ENST00000474048 PLBD2Q8NHP8 589 aa12.92□□□□□ -0.34
PRPF38A-202ENST00000474048 AK7Q96M32 723 aa12.92□□□□□ -0.34
PRPF38A-202ENST00000474048 AFDNP55196 1824 aaKnown RBP12.92□□□□□ -0.34
PRPF38A-202ENST00000474048 HSP90AB3PQ58FF7 597 aa12.91□□□□□ -0.34
PRPF38A-202ENST00000474048 C9orf78Q9NZ63 289 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms