RNA–Protein interactions for RNA: ENST00000473724.1

SBF1-206, Transcript of SET binding factor 1, humanhuman

TSL 2

Gene SBF1, Length 446 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBF1-206ENST00000473724 SIPA1L3O60292 1781 aaPredicted RBP17.68■□□□□ 0.42
SBF1-206ENST00000473724 NRXN2Q9P2S2 1712 aa17.67■□□□□ 0.42
SBF1-206ENST00000473724 POLRMTO00411 1230 aaKnown RBP17.67■□□□□ 0.42
SBF1-206ENST00000473724 USPL1Q5W0Q7 1092 aa17.67■□□□□ 0.42
SBF1-206ENST00000473724 DALRD3Q5D0E6 543 aaKnown RBP17.66■□□□□ 0.42
SBF1-206ENST00000473724 NARFQ9UHQ1 456 aa17.66■□□□□ 0.42
SBF1-206ENST00000473724 COL15A1P39059 1388 aa17.66■□□□□ 0.42
SBF1-206ENST00000473724 DLEC1Q9Y238 1755 aa17.65■□□□□ 0.42
SBF1-206ENST00000473724 ZBTB1Q9Y2K1 713 aa17.64■□□□□ 0.41
SBF1-206ENST00000473724 GAS2L2Q8NHY3 880 aa17.63■□□□□ 0.41
SBF1-206ENST00000473724 U2SURPO15042 1029 aaKnown RBP17.62■□□□□ 0.41
SBF1-206ENST00000473724 CHRNA5P30532 468 aa17.62■□□□□ 0.41
SBF1-206ENST00000473724 NFIXQ14938 502 aa17.62■□□□□ 0.41
SBF1-206ENST00000473724 C9orf131Q5VYM1 1079 aa17.62■□□□□ 0.41
SBF1-206ENST00000473724 TTC5Q8N0Z6 440 aa17.62■□□□□ 0.41
SBF1-206ENST00000473724 GNAT3A8MTJ3 354 aa17.61■□□□□ 0.41
SBF1-206ENST00000473724 BCL2L12Q9HB09 334 aa17.61■□□□□ 0.41
SBF1-206ENST00000473724 TOMM70O94826 608 aa17.6■□□□□ 0.41
SBF1-206ENST00000473724 STARD3NLO95772 234 aa17.6■□□□□ 0.41
SBF1-206ENST00000473724 EIF5P55010 431 aaKnown RBP17.6■□□□□ 0.41
SBF1-206ENST00000473724 TEFQ10587 303 aa17.6■□□□□ 0.41
SBF1-206ENST00000473724 IL17REQ8NFR9 667 aa17.6■□□□□ 0.41
SBF1-206ENST00000473724 CCDC88AQ3V6T2 1871 aa17.6■□□□□ 0.41
SBF1-206ENST00000473724 CANXP27824 592 aaKnown RBP17.59■□□□□ 0.41
SBF1-206ENST00000473724 ZNF790Q6PG37 636 aa17.59■□□□□ 0.41
SBF1-206ENST00000473724 TEX13AQ9BXU3 409 aaPredicted RBP17.59■□□□□ 0.41
SBF1-206ENST00000473724 NMRK2Q9NPI5 230 aa17.59■□□□□ 0.41
SBF1-206ENST00000473724 SCN7AQ01118 1682 aa17.58■□□□□ 0.41
SBF1-206ENST00000473724 HEG1Q9ULI3 1381 aa17.58■□□□□ 0.4
SBF1-206ENST00000473724 A0A087WZG4 1122 aa17.58■□□□□ 0.4
SBF1-206ENST00000473724 SERPINB2P05120 415 aa17.58■□□□□ 0.4
SBF1-206ENST00000473724 CNGB1Q14028 1251 aaPredicted RBP17.58■□□□□ 0.4
SBF1-206ENST00000473724 ZNF496Q96IT1 587 aaPredicted RBP17.58■□□□□ 0.4
SBF1-206ENST00000473724 ANKRD31Q8N7Z5 1873 aa17.58■□□□□ 0.4
SBF1-206ENST00000473724 CEMIPQ8WUJ3 1361 aa17.57■□□□□ 0.4
SBF1-206ENST00000473724 RNF181Q9P0P0 153 aa17.57■□□□□ 0.4
SBF1-206ENST00000473724 TNRC6CQ9HCJ0 1690 aaKnown RBP17.57■□□□□ 0.4
SBF1-206ENST00000473724 APLP1P51693 650 aa17.56■□□□□ 0.4
SBF1-206ENST00000473724 CFAP53Q96M91 514 aa17.56■□□□□ 0.4
SBF1-206ENST00000473724 KDM2BQ8NHM5 1336 aa17.55■□□□□ 0.4
SBF1-206ENST00000473724 FMNL2Q96PY5 1086 aa17.55■□□□□ 0.4
SBF1-206ENST00000473724 RSPH6AQ9H0K4 717 aa17.55■□□□□ 0.4
SBF1-206ENST00000473724 PRKAR2BP31323 418 aa17.54■□□□□ 0.4
SBF1-206ENST00000473724 IL6STP40189 918 aaPredicted RBP17.54■□□□□ 0.4
SBF1-206ENST00000473724 RBM46Q8TBY0 533 aaKnown RBP17.54■□□□□ 0.4
SBF1-206ENST00000473724 PHACTR3Q96KR7 559 aa17.54■□□□□ 0.4
SBF1-206ENST00000473724 ZC3H4Q9UPT8 1303 aaKnown RBP17.53■□□□□ 0.4
SBF1-206ENST00000473724 H0YIN7 160 aa17.53■□□□□ 0.4
SBF1-206ENST00000473724 C2CD5Q86YS7 1000 aa17.53■□□□□ 0.4
SBF1-206ENST00000473724 TTLL6Q8N841 843 aa17.53■□□□□ 0.4
SBF1-206ENST00000473724 NUDCQ9Y266 331 aa17.53■□□□□ 0.4
SBF1-206ENST00000473724 BCORQ6W2J9 1755 aa17.53■□□□□ 0.4
SBF1-206ENST00000473724 CARMIL3Q8ND23 1372 aa17.53■□□□□ 0.4
SBF1-206ENST00000473724 WDR90Q96KV7 1748 aa17.52■□□□□ 0.4
SBF1-206ENST00000473724 BTBD11A6QL63 1104 aa17.52■□□□□ 0.4
SBF1-206ENST00000473724 TBC1D9BQ66K14 1250 aa17.52■□□□□ 0.4
SBF1-206ENST00000473724 BICDL1Q6ZP65 573 aa17.52■□□□□ 0.4
SBF1-206ENST00000473724 C16orf71Q8IYS4 520 aaPredicted RBP17.52■□□□□ 0.4
SBF1-206ENST00000473724 PDZRN3Q9UPQ7 1066 aa17.52■□□□□ 0.4
SBF1-206ENST00000473724 DICER1Q9UPY3 1922 aaKnown RBP17.52■□□□□ 0.4
SBF1-206ENST00000473724 COL11A2P13942 1736 aaPredicted RBP17.51■□□□□ 0.39
SBF1-206ENST00000473724 RASSF7Q02833 373 aa17.51■□□□□ 0.39
SBF1-206ENST00000473724 TIAM2Q8IVF5 1701 aa17.51■□□□□ 0.39
SBF1-206ENST00000473724 TBC1D2BQ9UPU7 963 aa17.51■□□□□ 0.39
SBF1-206ENST00000473724 FER1L6Q2WGJ9 1857 aa17.5■□□□□ 0.39
SBF1-206ENST00000473724 A1BGP04217 495 aa17.5■□□□□ 0.39
SBF1-206ENST00000473724 LMNB1P20700 586 aa17.5■□□□□ 0.39
SBF1-206ENST00000473724 PPP2R1AP30153 589 aa17.5■□□□□ 0.39
SBF1-206ENST00000473724 FSTL1Q12841 308 aa17.5■□□□□ 0.39
SBF1-206ENST00000473724 IFFO2Q5TF58 517 aa17.5■□□□□ 0.39
SBF1-206ENST00000473724 BRIP1Q9BX63 1249 aa17.5■□□□□ 0.39
SBF1-206ENST00000473724 ZNF330Q9Y3S2 320 aaPredicted RBP17.5■□□□□ 0.39
SBF1-206ENST00000473724 KCNQ3O43525 872 aa17.49■□□□□ 0.39
SBF1-206ENST00000473724 PDE6BP35913 854 aa17.49■□□□□ 0.39
SBF1-206ENST00000473724 NPM2Q86SE8 214 aaKnown RBP17.49■□□□□ 0.39
SBF1-206ENST00000473724 DNAJC5GQ8N7S2 189 aa17.49■□□□□ 0.39
SBF1-206ENST00000473724 RRAGCQ9HB90 399 aa17.49■□□□□ 0.39
SBF1-206ENST00000473724 CACNA1SQ13698 1873 aa17.49■□□□□ 0.39
SBF1-206ENST00000473724 ARFGEF2Q9Y6D5 1785 aa17.48■□□□□ 0.39
SBF1-206ENST00000473724 CAMTA2O94983 1202 aa17.48■□□□□ 0.39
SBF1-206ENST00000473724 U2AF1L5P0DN76 240 aaPredicted RBP17.48■□□□□ 0.39
SBF1-206ENST00000473724 U2AF1Q01081 240 aaKnown RBP eCLIP17.48■□□□□ 0.39
SBF1-206ENST00000473724 PRR5LQ6MZQ0 368 aa17.48■□□□□ 0.39
SBF1-206ENST00000473724 DLG5Q8TDM6 1919 aa17.47■□□□□ 0.39
SBF1-206ENST00000473724 PRELPP51888 382 aa17.47■□□□□ 0.39
SBF1-206ENST00000473724 RTF1Q92541 710 aaKnown RBP17.47■□□□□ 0.39
SBF1-206ENST00000473724 SETDB2Q96T68 719 aa17.47■□□□□ 0.39
SBF1-206ENST00000473724 USP16Q9Y5T5 823 aa17.47■□□□□ 0.39
SBF1-206ENST00000473724 GLTPD2A6NH11 291 aa17.46■□□□□ 0.39
SBF1-206ENST00000473724 NFKBIEO00221 500 aa17.46■□□□□ 0.39
SBF1-206ENST00000473724 ZNF622Q969S3 477 aaKnown RBP eCLIP17.46■□□□□ 0.39
SBF1-206ENST00000473724 SLX4Q8IY92 1834 aa17.46■□□□□ 0.39
SBF1-206ENST00000473724 HTATSF1O43719 755 aaKnown RBP17.45■□□□□ 0.38
SBF1-206ENST00000473724 MCM10Q7L590 875 aa17.45■□□□□ 0.38
SBF1-206ENST00000473724 DZIP3Q86Y13 1208 aaKnown RBP17.45■□□□□ 0.38
SBF1-206ENST00000473724 CNBD1Q8NA66 436 aa17.45■□□□□ 0.38
SBF1-206ENST00000473724 PCNTO95613 3336 aa17.45■□□□□ 0.38
SBF1-206ENST00000473724 SNRPA1P09661 255 aaKnown RBP17.44■□□□□ 0.38
SBF1-206ENST00000473724 CLEC4GQ6UXB4 293 aa17.44■□□□□ 0.38
SBF1-206ENST00000473724 PRAMEF22A3QJZ6 481 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms