RNA–Protein interactions for RNA: ENST00000473311.5

ABCF3-210, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 5

Gene ABCF3, Length 2,844 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-210ENST00000473311 BRD1O95696 1058 aa16.93■□□□□ 0.3
ABCF3-210ENST00000473311 UBTFL1P0CB47 393 aaPredicted RBP16.93■□□□□ 0.3
ABCF3-210ENST00000473311 NLRP6P59044 892 aa16.93■□□□□ 0.3
ABCF3-210ENST00000473311 MBD3O95983 291 aa16.93■□□□□ 0.3
ABCF3-210ENST00000473311 STAP2Q9UGK3 403 aa16.93■□□□□ 0.3
ABCF3-210ENST00000473311 PAXIP1Q6ZW49 1069 aaPredicted RBP16.92■□□□□ 0.3
ABCF3-210ENST00000473311 ZSCAN20P17040 1043 aaPredicted RBP16.92■□□□□ 0.3
ABCF3-210ENST00000473311 NUTM2GQ5VZR2 741 aa16.92■□□□□ 0.3
ABCF3-210ENST00000473311 RGPD8O14715 1765 aaPredicted RBP16.92■□□□□ 0.3
ABCF3-210ENST00000473311 CACNA1FO60840 1977 aa16.92■□□□□ 0.3
ABCF3-210ENST00000473311 LTV1Q96GA3 475 aaPredicted RBP16.92■□□□□ 0.3
ABCF3-210ENST00000473311 INTS4Q96HW7 963 aaKnown RBP16.92■□□□□ 0.3
ABCF3-210ENST00000473311 USP44Q9H0E7 712 aa16.92■□□□□ 0.3
ABCF3-210ENST00000473311 EID1Q9Y6B2 187 aa16.92■□□□□ 0.3
ABCF3-210ENST00000473311 UQCRHLA0A096LP55 91 aa16.91■□□□□ 0.3
ABCF3-210ENST00000473311 UQCRHP07919 91 aa16.91■□□□□ 0.3
ABCF3-210ENST00000473311 IL17REQ8NFR9 667 aa16.91■□□□□ 0.3
ABCF3-210ENST00000473311 LRRC37A3O60309 1634 aa16.91■□□□□ 0.3
ABCF3-210ENST00000473311 ZNF500O60304 480 aaPredicted RBP16.91■□□□□ 0.3
ABCF3-210ENST00000473311 FOXD4L6Q3SYB3 417 aaPredicted RBP16.91■□□□□ 0.3
ABCF3-210ENST00000473311 FOXD4L3Q6VB84 417 aaPredicted RBP16.91■□□□□ 0.3
ABCF3-210ENST00000473311 PDLIM2Q96JY6 352 aa16.91■□□□□ 0.3
ABCF3-210ENST00000473311 MAP3K5Q99683 1374 aa16.9■□□□□ 0.3
ABCF3-210ENST00000473311 SOS1Q07889 1333 aaPredicted RBP16.9■□□□□ 0.3
ABCF3-210ENST00000473311 TAF7Q15545 349 aaPredicted RBP16.9■□□□□ 0.3
ABCF3-210ENST00000473311 HDGFL1Q5TGJ6 251 aa16.9■□□□□ 0.3
ABCF3-210ENST00000473311 NUTM1Q86Y26 1132 aa16.9■□□□□ 0.3
ABCF3-210ENST00000473311 PIK3C2AO00443 1686 aa16.9■□□□□ 0.3
ABCF3-210ENST00000473311 MAP4K4O95819 1239 aaPredicted RBP16.9■□□□□ 0.3
ABCF3-210ENST00000473311 R3HCC1Q9Y3T6 440 aaKnown RBP16.9■□□□□ 0.3
ABCF3-210ENST00000473311 HOXC9P31274 260 aa16.89■□□□□ 0.29
ABCF3-210ENST00000473311 PHAXQ9H814 394 aaKnown RBP16.89■□□□□ 0.29
ABCF3-210ENST00000473311 SURF6O75683 361 aaKnown RBP16.89■□□□□ 0.29
ABCF3-210ENST00000473311 RNF214Q8ND24 703 aa16.89■□□□□ 0.29
ABCF3-210ENST00000473311 IL25Q9H293 177 aa16.89■□□□□ 0.29
ABCF3-210ENST00000473311 AOX1Q06278 1338 aa16.88■□□□□ 0.29
ABCF3-210ENST00000473311 SSH3Q8TE77 659 aa16.88■□□□□ 0.29
ABCF3-210ENST00000473311 NOL7Q9UMY1 257 aaKnown RBP16.88■□□□□ 0.29
ABCF3-210ENST00000473311 MCM5P33992 734 aa16.88■□□□□ 0.29
ABCF3-210ENST00000473311 CEBPAP49715 358 aaPredicted RBP16.88■□□□□ 0.29
ABCF3-210ENST00000473311 PLPPR3Q6T4P5 718 aa16.88■□□□□ 0.29
ABCF3-210ENST00000473311 PPP1R42Q7Z4L9 355 aa16.88■□□□□ 0.29
ABCF3-210ENST00000473311 PXDNLA1KZ92 1463 aa16.87■□□□□ 0.29
ABCF3-210ENST00000473311 DIP2AQ14689 1571 aa16.87■□□□□ 0.29
ABCF3-210ENST00000473311 KLHL34Q8N239 644 aa16.87■□□□□ 0.29
ABCF3-210ENST00000473311 EIF2S2P20042 333 aaKnown RBP16.87■□□□□ 0.29
ABCF3-210ENST00000473311 GDPD2Q9HCC8 539 aa16.87■□□□□ 0.29
ABCF3-210ENST00000473311 USHBP1Q8N6Y0 703 aa16.86■□□□□ 0.29
ABCF3-210ENST00000473311 N4BP2Q86UW6 1770 aaPredicted RBP16.86■□□□□ 0.29
ABCF3-210ENST00000473311 RAB11FIP3O75154 756 aa16.86■□□□□ 0.29
ABCF3-210ENST00000473311 HSPA4P34932 840 aa16.86■□□□□ 0.29
ABCF3-210ENST00000473311 SYAP1Q96A49 352 aaPredicted RBP16.86■□□□□ 0.29
ABCF3-210ENST00000473311 RHPN1Q8TCX5 695 aa16.85■□□□□ 0.29
ABCF3-210ENST00000473311 SRGAP3O43295 1099 aa16.85■□□□□ 0.29
ABCF3-210ENST00000473311 C14orf37Q86TY3 774 aa16.85■□□□□ 0.29
ABCF3-210ENST00000473311 BABAM1Q9NWV8 329 aa16.85■□□□□ 0.29
ABCF3-210ENST00000473311 WDR33Q9C0J8 1336 aaKnown RBP16.85■□□□□ 0.29
ABCF3-210ENST00000473311 SASS6Q6UVJ0 657 aa16.84■□□□□ 0.29
ABCF3-210ENST00000473311 ABTB2Q8N961 1025 aa16.84■□□□□ 0.29
ABCF3-210ENST00000473311 IL17RAQ96F46 866 aa16.84■□□□□ 0.29
ABCF3-210ENST00000473311 TSPY26PQ9H489 355 aa16.84■□□□□ 0.29
ABCF3-210ENST00000473311 TMEM51Q9NW97 253 aa16.84■□□□□ 0.29
ABCF3-210ENST00000473311 TBX22Q9Y458 520 aa16.84■□□□□ 0.29
ABCF3-210ENST00000473311 NWD1Q149M9 1564 aa16.84■□□□□ 0.29
ABCF3-210ENST00000473311 EPB41L2O43491 1005 aaKnown RBP16.83■□□□□ 0.29
ABCF3-210ENST00000473311 GADD45BO75293 160 aaPredicted RBP16.83■□□□□ 0.29
ABCF3-210ENST00000473311 XPCQ01831 940 aaPredicted RBP16.83■□□□□ 0.29
ABCF3-210ENST00000473311 PI4K2BQ8TCG2 481 aa16.83■□□□□ 0.29
ABCF3-210ENST00000473311 KIF1BPQ96EK5 621 aa16.83■□□□□ 0.29
ABCF3-210ENST00000473311 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.83■□□□□ 0.29
ABCF3-210ENST00000473311 ZKSCAN5Q9Y2L8 839 aa16.83■□□□□ 0.29
ABCF3-210ENST00000473311 TCHHQ07283 1943 aa16.83■□□□□ 0.29
ABCF3-210ENST00000473311 PRDM10Q9NQV6 1147 aa16.83■□□□□ 0.28
ABCF3-210ENST00000473311 RAD50Q92878 1312 aa16.83■□□□□ 0.28
ABCF3-210ENST00000473311 SGSM2O43147 1006 aa16.83■□□□□ 0.28
ABCF3-210ENST00000473311 POLA2Q14181 598 aa16.83■□□□□ 0.28
ABCF3-210ENST00000473311 USP48Q86UV5 1035 aa16.83■□□□□ 0.28
ABCF3-210ENST00000473311 CNTROBQ8N137 903 aa16.83■□□□□ 0.28
ABCF3-210ENST00000473311 NBPF7P0C2Y1 421 aaPredicted RBP16.82■□□□□ 0.28
ABCF3-210ENST00000473311 CCDC39Q9UFE4 941 aa16.82■□□□□ 0.28
ABCF3-210ENST00000473311 PHF14O94880 888 aa16.81■□□□□ 0.28
ABCF3-210ENST00000473311 SNX14Q9Y5W7 946 aa16.81■□□□□ 0.28
ABCF3-210ENST00000473311 KIF13AQ9H1H9 1805 aa16.81■□□□□ 0.28
ABCF3-210ENST00000473311 TPRNQ4KMQ1 711 aa16.81■□□□□ 0.28
ABCF3-210ENST00000473311 CHPF2Q9P2E5 772 aa16.81■□□□□ 0.28
ABCF3-210ENST00000473311 PI4KAP2A4QPH2 592 aa16.8■□□□□ 0.28
ABCF3-210ENST00000473311 CWC27Q6UX04 472 aaKnown RBP16.8■□□□□ 0.28
ABCF3-210ENST00000473311 PI4KAP1Q8N8J0 262 aa16.8■□□□□ 0.28
ABCF3-210ENST00000473311 LARP6Q9BRS8 491 aaKnown RBP16.8■□□□□ 0.28
ABCF3-210ENST00000473311 PTMAP06454 111 aaKnown RBP16.8■□□□□ 0.28
ABCF3-210ENST00000473311 CDK11BP21127 795 aaKnown RBP16.8■□□□□ 0.28
ABCF3-210ENST00000473311 OS9Q13438 667 aaPredicted RBP16.8■□□□□ 0.28
ABCF3-210ENST00000473311 DNAAF4Q8WXU2 420 aa16.8■□□□□ 0.28
ABCF3-210ENST00000473311 SETD1BQ9UPS6 1966 aaKnown RBP16.79■□□□□ 0.28
ABCF3-210ENST00000473311 LSG1Q9H089 658 aaKnown RBP16.79■□□□□ 0.28
ABCF3-210ENST00000473311 SPG7Q9UQ90 795 aa16.79■□□□□ 0.28
ABCF3-210ENST00000473311 RPAP1Q9BWH6 1393 aaPredicted RBP16.79■□□□□ 0.28
ABCF3-210ENST00000473311 AK2P54819 239 aa16.79■□□□□ 0.28
ABCF3-210ENST00000473311 RASEFQ8IZ41 740 aa16.79■□□□□ 0.28
ABCF3-210ENST00000473311 ANXA1P04083 346 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms