RNA–Protein interactions for RNA: ENST00000472807.1

CHEK2-223, Transcript of checkpoint kinase 2, humanhuman

TSL 2

Gene CHEK2, Length 514 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-223ENST00000472807 RSPH6AQ9H0K4 717 aa11.93□□□□□ -0.5
CHEK2-223ENST00000472807 KIAA1551Q9HCM1 1747 aa11.93□□□□□ -0.5
CHEK2-223ENST00000472807 COL15A1P39059 1388 aa11.92□□□□□ -0.5
CHEK2-223ENST00000472807 GIGYF1O75420 1035 aaPredicted RBP11.92□□□□□ -0.5
CHEK2-223ENST00000472807 FKBP8Q14318 412 aa11.92□□□□□ -0.5
CHEK2-223ENST00000472807 ZBTB1Q9Y2K1 713 aa11.92□□□□□ -0.5
CHEK2-223ENST00000472807 CEMIPQ8WUJ3 1361 aa11.92□□□□□ -0.5
CHEK2-223ENST00000472807 STARD3NLO95772 234 aa11.91□□□□□ -0.5
CHEK2-223ENST00000472807 ZNF790Q6PG37 636 aa11.91□□□□□ -0.5
CHEK2-223ENST00000472807 IL17REQ8NFR9 667 aa11.91□□□□□ -0.5
CHEK2-223ENST00000472807 PHACTR3Q96KR7 559 aa11.91□□□□□ -0.5
CHEK2-223ENST00000472807 CEP350Q5VT06 3117 aa11.91□□□□□ -0.5
CHEK2-223ENST00000472807 ATP10DQ9P241 1426 aa11.91□□□□□ -0.5
CHEK2-223ENST00000472807 A0A0G2JLW4 131 aa11.9□□□□□ -0.5
CHEK2-223ENST00000472807 FCHSD2O94868 740 aa11.9□□□□□ -0.5
CHEK2-223ENST00000472807 USPL1Q5W0Q7 1092 aa11.9□□□□□ -0.5
CHEK2-223ENST00000472807 RTF1Q92541 710 aaKnown RBP11.9□□□□□ -0.5
CHEK2-223ENST00000472807 ADCY9O60503 1353 aa11.9□□□□□ -0.5
CHEK2-223ENST00000472807 HEG1Q9ULI3 1381 aa11.9□□□□□ -0.5
CHEK2-223ENST00000472807 BRCA1P38398 1863 aaKnown RBP11.89□□□□□ -0.51
CHEK2-223ENST00000472807 BTBD11A6QL63 1104 aa11.89□□□□□ -0.51
CHEK2-223ENST00000472807 POLRMTO00411 1230 aaKnown RBP11.89□□□□□ -0.51
CHEK2-223ENST00000472807 DPEP1P16444 411 aa11.89□□□□□ -0.51
CHEK2-223ENST00000472807 CANXP27824 592 aaKnown RBP11.89□□□□□ -0.51
CHEK2-223ENST00000472807 C1QTNF8P60827 252 aa11.89□□□□□ -0.51
CHEK2-223ENST00000472807 DDR1Q08345 913 aa11.89□□□□□ -0.51
CHEK2-223ENST00000472807 ZNF496Q96IT1 587 aaPredicted RBP11.89□□□□□ -0.51
CHEK2-223ENST00000472807 FMNL2Q96PY5 1086 aa11.89□□□□□ -0.51
CHEK2-223ENST00000472807 TEX13AQ9BXU3 409 aaPredicted RBP11.89□□□□□ -0.51
CHEK2-223ENST00000472807 NARFQ9UHQ1 456 aa11.89□□□□□ -0.51
CHEK2-223ENST00000472807 BCS1LQ9Y276 419 aa11.89□□□□□ -0.51
CHEK2-223ENST00000472807 A0A087WZG4 1122 aa11.88□□□□□ -0.51
CHEK2-223ENST00000472807 NEFMP07197 916 aa11.88□□□□□ -0.51
CHEK2-223ENST00000472807 NPM2Q86SE8 214 aaKnown RBP11.87□□□□□ -0.51
CHEK2-223ENST00000472807 GPBP1L1Q9HC44 474 aaPredicted RBP11.87□□□□□ -0.51
CHEK2-223ENST00000472807 ZNF330Q9Y3S2 320 aaPredicted RBP11.87□□□□□ -0.51
CHEK2-223ENST00000472807 SCN7AQ01118 1682 aa11.87□□□□□ -0.51
CHEK2-223ENST00000472807 AFDNP55196 1824 aaKnown RBP11.86□□□□□ -0.51
CHEK2-223ENST00000472807 ARFGEF1Q9Y6D6 1849 aa11.86□□□□□ -0.51
CHEK2-223ENST00000472807 TM4SF1P30408 202 aa11.86□□□□□ -0.51
CHEK2-223ENST00000472807 EIF5P55010 431 aaKnown RBP11.86□□□□□ -0.51
CHEK2-223ENST00000472807 NFIXQ14938 502 aa11.86□□□□□ -0.51
CHEK2-223ENST00000472807 MCM10Q7L590 875 aa11.86□□□□□ -0.51
CHEK2-223ENST00000472807 PIM2Q9P1W9 311 aa11.86□□□□□ -0.51
CHEK2-223ENST00000472807 NRXN2Q9P2S2 1712 aa11.86□□□□□ -0.51
CHEK2-223ENST00000472807 HTATSF1O43719 755 aaKnown RBP11.85□□□□□ -0.51
CHEK2-223ENST00000472807 DALRD3Q5D0E6 543 aaKnown RBP11.85□□□□□ -0.51
CHEK2-223ENST00000472807 ARHGAP27Q6ZUM4 889 aa11.85□□□□□ -0.51
CHEK2-223ENST00000472807 ZNF526Q8TF50 670 aaPredicted RBP11.85□□□□□ -0.51
CHEK2-223ENST00000472807 SENP3-EIF4A1A0A087X0R7 540 aa11.84□□□□□ -0.51
CHEK2-223ENST00000472807 KCNA3P22001 575 aa11.84□□□□□ -0.51
CHEK2-223ENST00000472807 IL6STP40189 918 aaPredicted RBP11.84□□□□□ -0.51
CHEK2-223ENST00000472807 BCL2L12Q9HB09 334 aa11.84□□□□□ -0.51
CHEK2-223ENST00000472807 CARMIL3Q8ND23 1372 aa11.83□□□□□ -0.52
CHEK2-223ENST00000472807 KCNQ3O43525 872 aa11.83□□□□□ -0.52
CHEK2-223ENST00000472807 CAPN15O75808 1086 aa11.83□□□□□ -0.52
CHEK2-223ENST00000472807 SERPINB2P05120 415 aa11.83□□□□□ -0.52
CHEK2-223ENST00000472807 SNRPA1P09661 255 aaKnown RBP11.83□□□□□ -0.52
CHEK2-223ENST00000472807 CHRNA5P30532 468 aa11.83□□□□□ -0.52
CHEK2-223ENST00000472807 BICDL1Q6ZP65 573 aa11.83□□□□□ -0.52
CHEK2-223ENST00000472807 PNNQ9H307 717 aaKnown RBP11.83□□□□□ -0.52
CHEK2-223ENST00000472807 MAPK8IP3Q9UPT6 1336 aa11.83□□□□□ -0.52
CHEK2-223ENST00000472807 BCORQ6W2J9 1755 aa11.82□□□□□ -0.52
CHEK2-223ENST00000472807 DLEC1Q9Y238 1755 aa11.82□□□□□ -0.52
CHEK2-223ENST00000472807 DLG5Q8TDM6 1919 aa11.82□□□□□ -0.52
CHEK2-223ENST00000472807 A1BGP04217 495 aa11.82□□□□□ -0.52
CHEK2-223ENST00000472807 DCTN1Q14203 1278 aa11.82□□□□□ -0.52
CHEK2-223ENST00000472807 RALBP1Q15311 655 aa11.82□□□□□ -0.52
CHEK2-223ENST00000472807 TBC1D2BQ9UPU7 963 aa11.82□□□□□ -0.52
CHEK2-223ENST00000472807 TAF7Q15545 349 aaPredicted RBP11.81□□□□□ -0.52
CHEK2-223ENST00000472807 TBC1D9BQ66K14 1250 aa11.81□□□□□ -0.52
CHEK2-223ENST00000472807 LAMB4A4D0S4 1761 aa11.8□□□□□ -0.52
CHEK2-223ENST00000472807 NPHP1O15259 732 aa11.8□□□□□ -0.52
CHEK2-223ENST00000472807 CAMTA2O94983 1202 aa11.8□□□□□ -0.52
CHEK2-223ENST00000472807 NFE2L2Q16236 605 aa11.8□□□□□ -0.52
CHEK2-223ENST00000472807 DZIP3Q86Y13 1208 aaKnown RBP11.8□□□□□ -0.52
CHEK2-223ENST00000472807 C2CD5Q86YS7 1000 aa11.8□□□□□ -0.52
CHEK2-223ENST00000472807 PNISRQ8TF01 805 aaKnown RBP11.8□□□□□ -0.52
CHEK2-223ENST00000472807 PLEKHF1Q96S99 279 aa11.8□□□□□ -0.52
CHEK2-223ENST00000472807 USP16Q9Y5T5 823 aa11.8□□□□□ -0.52
CHEK2-223ENST00000472807 PRAMEF22A3QJZ6 481 aa11.79□□□□□ -0.52
CHEK2-223ENST00000472807 H0YIN7 160 aa11.79□□□□□ -0.52
CHEK2-223ENST00000472807 C9orf131Q5VYM1 1079 aa11.79□□□□□ -0.52
CHEK2-223ENST00000472807 CNBD1Q8NA66 436 aa11.79□□□□□ -0.52
CHEK2-223ENST00000472807 SETDB2Q96T68 719 aa11.79□□□□□ -0.52
CHEK2-223ENST00000472807 PDZRN3Q9UPQ7 1066 aa11.79□□□□□ -0.52
CHEK2-223ENST00000472807 ZNF652Q9Y2D9 606 aa11.79□□□□□ -0.52
CHEK2-223ENST00000472807 U3KPZ7 1027 aaPredicted RBP11.79□□□□□ -0.52
CHEK2-223ENST00000472807 KDM3BQ7LBC6 1761 aa11.79□□□□□ -0.52
CHEK2-223ENST00000472807 PDE6BP35913 854 aa11.78□□□□□ -0.52
CHEK2-223ENST00000472807 PIP4K2AP48426 406 aaPredicted RBP11.78□□□□□ -0.52
CHEK2-223ENST00000472807 ST5P78524 1137 aa11.78□□□□□ -0.52
CHEK2-223ENST00000472807 TTLL6Q8N841 843 aa11.78□□□□□ -0.52
CHEK2-223ENST00000472807 MIS18AQ9NYP9 233 aa11.78□□□□□ -0.52
CHEK2-223ENST00000472807 RNF181Q9P0P0 153 aa11.78□□□□□ -0.52
CHEK2-223ENST00000472807 ANKRD31Q8N7Z5 1873 aa11.78□□□□□ -0.52
CHEK2-223ENST00000472807 DDX10Q13206 875 aaKnown RBP11.77□□□□□ -0.53
CHEK2-223ENST00000472807 PRR5LQ6MZQ0 368 aa11.77□□□□□ -0.53
CHEK2-223ENST00000472807 CLEC4GQ6UXB4 293 aa11.77□□□□□ -0.53
CHEK2-223ENST00000472807 BRIP1Q9BX63 1249 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms