RNA–Protein interactions for RNA: ENST00000472677.1

TRABD-206, Transcript of TraB domain containing, humanhuman

TSL 1 (best)

Gene TRABD, Length 1,661 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD-206ENST00000472677 NBPF14Q5TI25 921 aa27.57■■■□□ 2
TRABD-206ENST00000472677 TJP1Q07157 1748 aa27.57■■■□□ 2
TRABD-206ENST00000472677 A1BGP04217 495 aa27.56■■■□□ 2
TRABD-206ENST00000472677 HDGFL1Q5TGJ6 251 aa27.56■■■□□ 2
TRABD-206ENST00000472677 CCDC87Q9NVE4 849 aa27.56■■■□□ 2
TRABD-206ENST00000472677 C5P01031 1676 aa27.56■■■□□ 2
TRABD-206ENST00000472677 RREB1Q92766 1687 aa27.56■■■□□ 2
TRABD-206ENST00000472677 SOS1Q07889 1333 aaPredicted RBP27.56■■■□□ 2
TRABD-206ENST00000472677 RC3H1Q5TC82 1133 aaKnown RBP27.56■■■□□ 2
TRABD-206ENST00000472677 STK32BQ9NY57 414 aa27.56■■■□□ 2
TRABD-206ENST00000472677 CNTNAP4Q9C0A0 1308 aa27.55■■■□□ 2
TRABD-206ENST00000472677 GNPATO15228 680 aa27.54■■■□□ 2
TRABD-206ENST00000472677 CANXP27824 592 aaKnown RBP27.54■■■□□ 2
TRABD-206ENST00000472677 INTS5Q6P9B9 1019 aaKnown RBP27.54■■■□□ 2
TRABD-206ENST00000472677 CHMP4AQ9BY43 222 aa27.54■■■□□ 2
TRABD-206ENST00000472677 TFCP2L1Q9NZI6 479 aa27.54■■■□□ 2
TRABD-206ENST00000472677 CICQ96RK0 1608 aaPredicted RBP27.53■■■□□ 2
TRABD-206ENST00000472677 VAMP4O75379 141 aa27.53■■■□□ 2
TRABD-206ENST00000472677 ZNF827Q17R98 1081 aa27.53■■■□□ 2
TRABD-206ENST00000472677 AKT1S1Q96B36 256 aa27.53■■■□□ 2
TRABD-206ENST00000472677 ANO8Q9HCE9 1232 aaPredicted RBP27.53■■■□□ 2
TRABD-206ENST00000472677 ZBTB1Q9Y2K1 713 aa27.53■■■□□ 2
TRABD-206ENST00000472677 PIP4K2AP48426 406 aaPredicted RBP27.52■■■□□ 2
TRABD-206ENST00000472677 TAF1LQ8IZX4 1826 aa27.52■■■□□ 2
TRABD-206ENST00000472677 C4BP0C0L5 1744 aa27.52■■■□□ 2
TRABD-206ENST00000472677 NUP188Q5SRE5 1749 aa27.52■■■□□ 2
TRABD-206ENST00000472677 SLC15A2Q16348 729 aa27.52■■■□□ 2
TRABD-206ENST00000472677 CCDC30Q5VVM6 783 aa27.51■■□□□ 1.99
TRABD-206ENST00000472677 RTCBQ9Y3I0 505 aaKnown RBP27.51■■□□□ 1.99
TRABD-206ENST00000472677 ZNF330Q9Y3S2 320 aaPredicted RBP27.51■■□□□ 1.99
TRABD-206ENST00000472677 COL5A3P25940 1745 aaPredicted RBP27.51■■□□□ 1.99
TRABD-206ENST00000472677 MYL6BP14649 208 aa27.49■■□□□ 1.99
TRABD-206ENST00000472677 NPM2Q86SE8 214 aaKnown RBP27.49■■□□□ 1.99
TRABD-206ENST00000472677 RPS6KA4O75676 772 aa27.49■■□□□ 1.99
TRABD-206ENST00000472677 PHF14O94880 888 aa27.49■■□□□ 1.99
TRABD-206ENST00000472677 CHPF2Q9P2E5 772 aa27.49■■□□□ 1.99
TRABD-206ENST00000472677 NBPF26B4DH59 902 aa27.48■■□□□ 1.99
TRABD-206ENST00000472677 TCERG1O14776 1098 aaKnown RBP27.48■■□□□ 1.99
TRABD-206ENST00000472677 NBPF10Q6P3W6 841 aaKnown RBP27.48■■□□□ 1.99
TRABD-206ENST00000472677 NBPF15Q8N660 670 aa27.48■■□□□ 1.99
TRABD-206ENST00000472677 DBF4Q9UBU7 674 aaPredicted RBP27.48■■□□□ 1.99
TRABD-206ENST00000472677 LAMB4A4D0S4 1761 aa27.48■■□□□ 1.99
TRABD-206ENST00000472677 ERBB4Q15303 1308 aa27.47■■□□□ 1.99
TRABD-206ENST00000472677 SMIM5Q71RC9 77 aa27.47■■□□□ 1.99
TRABD-206ENST00000472677 STK31Q9BXU1 1019 aa27.47■■□□□ 1.99
TRABD-206ENST00000472677 CT47B1P0C2W7 299 aaPredicted RBP27.46■■□□□ 1.99
TRABD-206ENST00000472677 ANXA1P04083 346 aa27.46■■□□□ 1.99
TRABD-206ENST00000472677 IL6STP40189 918 aaPredicted RBP27.46■■□□□ 1.99
TRABD-206ENST00000472677 ARXQ96QS3 562 aa27.46■■□□□ 1.99
TRABD-206ENST00000472677 DDX21Q9NR30 783 aaKnown RBP eCLIP27.46■■□□□ 1.99
TRABD-206ENST00000472677 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.45■■□□□ 1.98
TRABD-206ENST00000472677 PDIA6Q15084 440 aa27.45■■□□□ 1.98
TRABD-206ENST00000472677 TRAPPC3LQ5T215 181 aa27.45■■□□□ 1.98
TRABD-206ENST00000472677 AMIGO3Q86WK7 504 aa27.45■■□□□ 1.98
TRABD-206ENST00000472677 MYH14Q7Z406 1995 aaKnown RBP27.44■■□□□ 1.98
TRABD-206ENST00000472677 SSFA2P28290 1259 aa27.44■■□□□ 1.98
TRABD-206ENST00000472677 PROSER3Q2NL68 480 aa27.44■■□□□ 1.98
TRABD-206ENST00000472677 MSH5O43196 834 aa27.43■■□□□ 1.98
TRABD-206ENST00000472677 EIF5P55010 431 aaKnown RBP27.43■■□□□ 1.98
TRABD-206ENST00000472677 SLC4A2P04920 1241 aa27.43■■□□□ 1.98
TRABD-206ENST00000472677 R3HDM1Q15032 1099 aaKnown RBP27.43■■□□□ 1.98
TRABD-206ENST00000472677 FLAD1Q8NFF5 587 aa27.43■■□□□ 1.98
TRABD-206ENST00000472677 ZNF428Q96B54 188 aa27.43■■□□□ 1.98
TRABD-206ENST00000472677 HYPKQ9NX55 129 aa27.42■■□□□ 1.98
TRABD-206ENST00000472677 ADRA2BP18089 450 aa27.41■■□□□ 1.98
TRABD-206ENST00000472677 ARHGEF1Q92888 912 aaKnown RBP27.41■■□□□ 1.98
TRABD-206ENST00000472677 COL15A1P39059 1388 aa27.41■■□□□ 1.98
TRABD-206ENST00000472677 RFC4P35249 363 aa27.4■■□□□ 1.98
TRABD-206ENST00000472677 PNPLA7Q6ZV29 1317 aa27.4■■□□□ 1.98
TRABD-206ENST00000472677 A0A087WZG4 1122 aa27.4■■□□□ 1.98
TRABD-206ENST00000472677 AIMP1Q12904 312 aaKnown RBP27.39■■□□□ 1.97
TRABD-206ENST00000472677 COL23A1Q86Y22 540 aaPredicted RBP27.39■■□□□ 1.97
TRABD-206ENST00000472677 PSDA5PKW4 1024 aaPredicted RBP27.38■■□□□ 1.97
TRABD-206ENST00000472677 SSH1Q8WYL5 1049 aa27.38■■□□□ 1.97
TRABD-206ENST00000472677 BCL2L13Q9BXK5 485 aa27.38■■□□□ 1.97
TRABD-206ENST00000472677 TBC1D2BQ9UPU7 963 aa27.38■■□□□ 1.97
TRABD-206ENST00000472677 ALDH1L2Q3SY69 923 aa27.37■■□□□ 1.97
TRABD-206ENST00000472677 COPS6Q7L5N1 327 aa27.37■■□□□ 1.97
TRABD-206ENST00000472677 LRP10Q7Z4F1 713 aa27.37■■□□□ 1.97
TRABD-206ENST00000472677 DZIP3Q86Y13 1208 aaKnown RBP27.37■■□□□ 1.97
TRABD-206ENST00000472677 PHAXQ9H814 394 aaKnown RBP27.37■■□□□ 1.97
TRABD-206ENST00000472677 SMC4Q9NTJ3 1288 aa27.37■■□□□ 1.97
TRABD-206ENST00000472677 UBR3Q6ZT12 1888 aa27.37■■□□□ 1.97
TRABD-206ENST00000472677 XAGE3Q8WTP9 111 aa27.36■■□□□ 1.97
TRABD-206ENST00000472677 ZPR1O75312 459 aa27.36■■□□□ 1.97
TRABD-206ENST00000472677 RARSP54136 660 aaKnown RBP27.36■■□□□ 1.97
TRABD-206ENST00000472677 KIF6Q6ZMV9 814 aa27.35■■□□□ 1.97
TRABD-206ENST00000472677 TTLL7Q6ZT98 887 aa27.34■■□□□ 1.97
TRABD-206ENST00000472677 PDGFDQ9GZP0 370 aaPredicted RBP27.33■■□□□ 1.97
TRABD-206ENST00000472677 G2E3Q7L622 706 aa27.33■■□□□ 1.97
TRABD-206ENST00000472677 MRPL50Q8N5N7 158 aaKnown RBP27.33■■□□□ 1.97
TRABD-206ENST00000472677 SRP68Q9UHB9 627 aaKnown RBP27.33■■□□□ 1.97
TRABD-206ENST00000472677 NARFQ9UHQ1 456 aa27.33■■□□□ 1.97
TRABD-206ENST00000472677 FLIIQ13045 1269 aa27.31■■□□□ 1.96
TRABD-206ENST00000472677 USPL1Q5W0Q7 1092 aa27.31■■□□□ 1.96
TRABD-206ENST00000472677 ZBTB3Q9H5J0 574 aa27.31■■□□□ 1.96
TRABD-206ENST00000472677 TUBGCP6Q96RT7 1819 aa27.31■■□□□ 1.96
TRABD-206ENST00000472677 USP42Q9H9J4 1324 aaKnown RBP27.31■■□□□ 1.96
TRABD-206ENST00000472677 DDX58O95786 925 aaKnown RBP27.3■■□□□ 1.96
TRABD-206ENST00000472677 ANKRD13DQ6ZTN6 518 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms