RNA–Protein interactions for RNA: ENST00000472066.1

PRKCB-205, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-205ENST00000472066 SMIM5Q71RC9 77 aa16■□□□□ 0.15
PRKCB-205ENST00000472066 AMIGO3Q86WK7 504 aa16■□□□□ 0.15
PRKCB-205ENST00000472066 PNPLA7Q6ZV29 1317 aa15.99■□□□□ 0.15
PRKCB-205ENST00000472066 C5P01031 1676 aa15.99■□□□□ 0.15
PRKCB-205ENST00000472066 RTCBQ9Y3I0 505 aaKnown RBP15.99■□□□□ 0.15
PRKCB-205ENST00000472066 C4BP0C0L5 1744 aa15.99■□□□□ 0.15
PRKCB-205ENST00000472066 TJP1Q07157 1748 aa15.99■□□□□ 0.15
PRKCB-205ENST00000472066 FANCIQ9NVI1 1328 aa15.98■□□□□ 0.15
PRKCB-205ENST00000472066 CICQ96RK0 1608 aaPredicted RBP15.98■□□□□ 0.15
PRKCB-205ENST00000472066 PHF14O94880 888 aa15.98■□□□□ 0.15
PRKCB-205ENST00000472066 CANXP27824 592 aaKnown RBP15.98■□□□□ 0.15
PRKCB-205ENST00000472066 SSFA2P28290 1259 aa15.98■□□□□ 0.15
PRKCB-205ENST00000472066 DUSP27Q5VZP5 1158 aa15.98■□□□□ 0.15
PRKCB-205ENST00000472066 COL23A1Q86Y22 540 aaPredicted RBP15.98■□□□□ 0.15
PRKCB-205ENST00000472066 C8orf58Q8NAV2 365 aa15.98■□□□□ 0.15
PRKCB-205ENST00000472066 FLAD1Q8NFF5 587 aa15.98■□□□□ 0.15
PRKCB-205ENST00000472066 PDGFDQ9GZP0 370 aaPredicted RBP15.98■□□□□ 0.15
PRKCB-205ENST00000472066 MYH16Q9H6N6 1097 aa15.98■□□□□ 0.15
PRKCB-205ENST00000472066 ZBTB1Q9Y2K1 713 aa15.98■□□□□ 0.15
PRKCB-205ENST00000472066 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.97■□□□□ 0.15
PRKCB-205ENST00000472066 ELL2O00472 640 aaPredicted RBP15.97■□□□□ 0.15
PRKCB-205ENST00000472066 HOXB7P09629 217 aa15.97■□□□□ 0.15
PRKCB-205ENST00000472066 SLFN5Q08AF3 891 aa15.97■□□□□ 0.15
PRKCB-205ENST00000472066 TRAPPC3LQ5T215 181 aa15.97■□□□□ 0.15
PRKCB-205ENST00000472066 CDCA7LQ96GN5 454 aa15.97■□□□□ 0.15
PRKCB-205ENST00000472066 E9PSI1 815 aa15.96■□□□□ 0.15
PRKCB-205ENST00000472066 EIF2S2P20042 333 aaKnown RBP15.96■□□□□ 0.15
PRKCB-205ENST00000472066 TSPYL6Q8N831 410 aa15.96■□□□□ 0.15
PRKCB-205ENST00000472066 ARHGEF1Q92888 912 aaKnown RBP15.96■□□□□ 0.15
PRKCB-205ENST00000472066 TAF1LQ8IZX4 1826 aa15.96■□□□□ 0.14
PRKCB-205ENST00000472066 SOS1Q07889 1333 aaPredicted RBP15.95■□□□□ 0.14
PRKCB-205ENST00000472066 COL5A3P25940 1745 aaPredicted RBP15.95■□□□□ 0.14
PRKCB-205ENST00000472066 NBPF26B4DH59 902 aa15.95■□□□□ 0.14
PRKCB-205ENST00000472066 MSH5O43196 834 aa15.95■□□□□ 0.14
PRKCB-205ENST00000472066 ADRA2BP18089 450 aa15.95■□□□□ 0.14
PRKCB-205ENST00000472066 IL6STP40189 918 aaPredicted RBP15.95■□□□□ 0.14
PRKCB-205ENST00000472066 PIP4K2AP48426 406 aaPredicted RBP15.95■□□□□ 0.14
PRKCB-205ENST00000472066 EIF5P55010 431 aaKnown RBP15.95■□□□□ 0.14
PRKCB-205ENST00000472066 EXOSC9Q06265 439 aaKnown RBP15.95■□□□□ 0.14
PRKCB-205ENST00000472066 NBPF10Q6P3W6 841 aaKnown RBP15.95■□□□□ 0.14
PRKCB-205ENST00000472066 NBPF15Q8N660 670 aa15.95■□□□□ 0.14
PRKCB-205ENST00000472066 TRMT2AQ8IZ69 625 aaKnown RBP15.94■□□□□ 0.14
PRKCB-205ENST00000472066 NECTIN2Q92692 538 aa15.94■□□□□ 0.14
PRKCB-205ENST00000472066 RFC4P35249 363 aa15.93■□□□□ 0.14
PRKCB-205ENST00000472066 TWISTNBQ3B726 338 aaPredicted RBP15.93■□□□□ 0.14
PRKCB-205ENST00000472066 HDGFL1Q5TGJ6 251 aa15.93■□□□□ 0.14
PRKCB-205ENST00000472066 SLC16A10Q8TF71 515 aa15.93■□□□□ 0.14
PRKCB-205ENST00000472066 ERBB4Q15303 1308 aa15.93■□□□□ 0.14
PRKCB-205ENST00000472066 PDIA6Q15084 440 aa15.92■□□□□ 0.14
PRKCB-205ENST00000472066 ZNF330Q9Y3S2 320 aaPredicted RBP15.92■□□□□ 0.14
PRKCB-205ENST00000472066 ZBED9Q6R2W3 1325 aa15.92■□□□□ 0.14
PRKCB-205ENST00000472066 A0A087WZG4 1122 aa15.91■□□□□ 0.14
PRKCB-205ENST00000472066 MYL6BP14649 208 aa15.91■□□□□ 0.14
PRKCB-205ENST00000472066 NPM2Q86SE8 214 aaKnown RBP15.91■□□□□ 0.14
PRKCB-205ENST00000472066 CHMP4AQ9BY43 222 aa15.91■□□□□ 0.14
PRKCB-205ENST00000472066 COL15A1P39059 1388 aa15.9■□□□□ 0.14
PRKCB-205ENST00000472066 VAMP4O75379 141 aa15.9■□□□□ 0.14
PRKCB-205ENST00000472066 ZBTB7AO95365 584 aa15.9■□□□□ 0.14
PRKCB-205ENST00000472066 PROSER3Q2NL68 480 aa15.9■□□□□ 0.14
PRKCB-205ENST00000472066 DDX21Q9NR30 783 aaKnown RBP eCLIP15.9■□□□□ 0.14
PRKCB-205ENST00000472066 DBF4Q9UBU7 674 aaPredicted RBP15.9■□□□□ 0.14
PRKCB-205ENST00000472066 MYH14Q7Z406 1995 aaKnown RBP15.89■□□□□ 0.13
PRKCB-205ENST00000472066 ANXA1P04083 346 aa15.89■□□□□ 0.13
PRKCB-205ENST00000472066 CCDC30Q5VVM6 783 aa15.89■□□□□ 0.13
PRKCB-205ENST00000472066 LRP10Q7Z4F1 713 aa15.89■□□□□ 0.13
PRKCB-205ENST00000472066 ARXQ96QS3 562 aa15.89■□□□□ 0.13
PRKCB-205ENST00000472066 MTFR1LQ9H019 292 aa15.89■□□□□ 0.13
PRKCB-205ENST00000472066 CHPF2Q9P2E5 772 aa15.89■□□□□ 0.13
PRKCB-205ENST00000472066 SRP68Q9UHB9 627 aaKnown RBP15.89■□□□□ 0.13
PRKCB-205ENST00000472066 NARFQ9UHQ1 456 aa15.89■□□□□ 0.13
PRKCB-205ENST00000472066 TBC1D2BQ9UPU7 963 aa15.89■□□□□ 0.13
PRKCB-205ENST00000472066 ATF5Q9Y2D1 282 aaPredicted RBP15.89■□□□□ 0.13
PRKCB-205ENST00000472066 USP42Q9H9J4 1324 aaKnown RBP15.89■□□□□ 0.13
PRKCB-205ENST00000472066 ZPR1O75312 459 aa15.88■□□□□ 0.13
PRKCB-205ENST00000472066 GYS1P13807 737 aa15.88■□□□□ 0.13
PRKCB-205ENST00000472066 USPL1Q5W0Q7 1092 aa15.88■□□□□ 0.13
PRKCB-205ENST00000472066 DZIP3Q86Y13 1208 aaKnown RBP15.88■□□□□ 0.13
PRKCB-205ENST00000472066 UBR3Q6ZT12 1888 aa15.88■□□□□ 0.13
PRKCB-205ENST00000472066 SPON1Q9HCB6 807 aa15.87■□□□□ 0.13
PRKCB-205ENST00000472066 QSER1Q2KHR3 1735 aa15.87■□□□□ 0.13
PRKCB-205ENST00000472066 TUBGCP6Q96RT7 1819 aa15.87■□□□□ 0.13
PRKCB-205ENST00000472066 LAMB4A4D0S4 1761 aa15.86■□□□□ 0.13
PRKCB-205ENST00000472066 CASZ1Q86V15 1759 aa15.86■□□□□ 0.13
PRKCB-205ENST00000472066 TCERG1O14776 1098 aaKnown RBP15.86■□□□□ 0.13
PRKCB-205ENST00000472066 CAMTA2O94983 1202 aa15.86■□□□□ 0.13
PRKCB-205ENST00000472066 MSL1Q68DK7 614 aa15.86■□□□□ 0.13
PRKCB-205ENST00000472066 TTLL7Q6ZT98 887 aa15.86■□□□□ 0.13
PRKCB-205ENST00000472066 COPS6Q7L5N1 327 aa15.86■□□□□ 0.13
PRKCB-205ENST00000472066 NLGN1Q8N2Q7 840 aa15.86■□□□□ 0.13
PRKCB-205ENST00000472066 BCL2L12Q9HB09 334 aa15.86■□□□□ 0.13
PRKCB-205ENST00000472066 HYPKQ9NX55 129 aa15.86■□□□□ 0.13
PRKCB-205ENST00000472066 FKBP8Q14318 412 aa15.85■□□□□ 0.13
PRKCB-205ENST00000472066 XAGE3Q8WTP9 111 aa15.85■□□□□ 0.13
PRKCB-205ENST00000472066 STK31Q9BXU1 1019 aa15.85■□□□□ 0.13
PRKCB-205ENST00000472066 SLC4A2P04920 1241 aa15.84■□□□□ 0.13
PRKCB-205ENST00000472066 AIMP1Q12904 312 aaKnown RBP15.84■□□□□ 0.13
PRKCB-205ENST00000472066 KIF6Q6ZMV9 814 aa15.84■□□□□ 0.13
PRKCB-205ENST00000472066 SGIP1Q9BQI5 828 aa15.84■□□□□ 0.13
PRKCB-205ENST00000472066 PHAXQ9H814 394 aaKnown RBP15.84■□□□□ 0.13
PRKCB-205ENST00000472066 ERVV-1B6SEH8 477 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms