RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 TSPYL4Q9UJ04 414 aa20.01■□□□□ 0.79
SDC3-203ENST00000471567 EIF4A1P60842 406 aaKnown RBP20■□□□□ 0.79
SDC3-203ENST00000471567 CALD1Q05682 793 aaKnown RBP20■□□□□ 0.79
SDC3-203ENST00000471567 CCDC27Q2M243 656 aa20■□□□□ 0.79
SDC3-203ENST00000471567 KDM3BQ7LBC6 1761 aa20■□□□□ 0.79
SDC3-203ENST00000471567 CHL1O00533 1208 aa19.99■□□□□ 0.79
SDC3-203ENST00000471567 PTGER2P43116 358 aa19.99■□□□□ 0.79
SDC3-203ENST00000471567 SMIM5Q71RC9 77 aa19.99■□□□□ 0.79
SDC3-203ENST00000471567 ARHGEF1Q92888 912 aaKnown RBP19.98■□□□□ 0.79
SDC3-203ENST00000471567 SGIP1Q9BQI5 828 aa19.98■□□□□ 0.79
SDC3-203ENST00000471567 USP16Q9Y5T5 823 aa19.98■□□□□ 0.79
SDC3-203ENST00000471567 RFC4P35249 363 aa19.97■□□□□ 0.79
SDC3-203ENST00000471567 CFAP44Q96MT7 982 aa19.97■□□□□ 0.79
SDC3-203ENST00000471567 ZBTB1Q9Y2K1 713 aa19.97■□□□□ 0.79
SDC3-203ENST00000471567 SOS1Q07889 1333 aaPredicted RBP19.97■□□□□ 0.79
SDC3-203ENST00000471567 GIGYF1O75420 1035 aaPredicted RBP19.96■□□□□ 0.79
SDC3-203ENST00000471567 POLD1P28340 1107 aa19.96■□□□□ 0.79
SDC3-203ENST00000471567 NGEFQ8N5V2 710 aa19.96■□□□□ 0.79
SDC3-203ENST00000471567 PRAMEF22A3QJZ6 481 aa19.95■□□□□ 0.78
SDC3-203ENST00000471567 CANXP27824 592 aaKnown RBP19.95■□□□□ 0.78
SDC3-203ENST00000471567 PPP1R1BQ9UD71 204 aaPredicted RBP19.95■□□□□ 0.78
SDC3-203ENST00000471567 LAS1LQ9Y4W2 734 aaKnown RBP19.95■□□□□ 0.78
SDC3-203ENST00000471567 COL24A1Q17RW2 1714 aa19.95■□□□□ 0.78
SDC3-203ENST00000471567 A1BGP04217 495 aa19.94■□□□□ 0.78
SDC3-203ENST00000471567 ZNF853P0CG23 659 aa19.94■□□□□ 0.78
SDC3-203ENST00000471567 IL6STP40189 918 aaPredicted RBP19.94■□□□□ 0.78
SDC3-203ENST00000471567 EIF5P55010 431 aaKnown RBP19.94■□□□□ 0.78
SDC3-203ENST00000471567 GNAI1P63096 354 aa19.94■□□□□ 0.78
SDC3-203ENST00000471567 IFT57Q9NWB7 429 aa19.94■□□□□ 0.78
SDC3-203ENST00000471567 A0A087WZG4 1122 aa19.93■□□□□ 0.78
SDC3-203ENST00000471567 WWC1Q8IX03 1113 aa19.93■□□□□ 0.78
SDC3-203ENST00000471567 MSL1Q68DK7 614 aa19.92■□□□□ 0.78
SDC3-203ENST00000471567 MIER1Q8N108 512 aa19.92■□□□□ 0.78
SDC3-203ENST00000471567 NLGN1Q8N2Q7 840 aa19.92■□□□□ 0.78
SDC3-203ENST00000471567 ARXQ96QS3 562 aa19.92■□□□□ 0.78
SDC3-203ENST00000471567 USP42Q9H9J4 1324 aaKnown RBP19.92■□□□□ 0.78
SDC3-203ENST00000471567 COL15A1P39059 1388 aa19.92■□□□□ 0.78
SDC3-203ENST00000471567 NARFQ9UHQ1 456 aa19.91■□□□□ 0.78
SDC3-203ENST00000471567 ZPR1O75312 459 aa19.9■□□□□ 0.78
SDC3-203ENST00000471567 GYS1P13807 737 aa19.9■□□□□ 0.78
SDC3-203ENST00000471567 NPM2Q86SE8 214 aaKnown RBP19.9■□□□□ 0.78
SDC3-203ENST00000471567 MBIPQ9NS73 344 aa19.9■□□□□ 0.78
SDC3-203ENST00000471567 IL16Q14005 1332 aa19.9■□□□□ 0.78
SDC3-203ENST00000471567 C4AP0C0L4 1744 aa19.89■□□□□ 0.77
SDC3-203ENST00000471567 SRCAPQ6ZRS2 3230 aa19.89■□□□□ 0.77
SDC3-203ENST00000471567 WDR63Q8IWG1 891 aa19.89■□□□□ 0.77
SDC3-203ENST00000471567 LAMB4A4D0S4 1761 aa19.88■□□□□ 0.77
SDC3-203ENST00000471567 ERBB4Q15303 1308 aa19.88■□□□□ 0.77
SDC3-203ENST00000471567 SENP3-EIF4A1A0A087X0R7 540 aa19.88■□□□□ 0.77
SDC3-203ENST00000471567 HOXB7P09629 217 aa19.88■□□□□ 0.77
SDC3-203ENST00000471567 SRP68Q9UHB9 627 aaKnown RBP19.88■□□□□ 0.77
SDC3-203ENST00000471567 NBPF26B4DH59 902 aa19.87■□□□□ 0.77
SDC3-203ENST00000471567 USPL1Q5W0Q7 1092 aa19.87■□□□□ 0.77
SDC3-203ENST00000471567 NBPF10Q6P3W6 841 aaKnown RBP19.87■□□□□ 0.77
SDC3-203ENST00000471567 NBPF15Q8N660 670 aa19.87■□□□□ 0.77
SDC3-203ENST00000471567 ZNF330Q9Y3S2 320 aaPredicted RBP19.86■□□□□ 0.77
SDC3-203ENST00000471567 SALL2Q9Y467 1007 aaPredicted RBP19.86■□□□□ 0.77
SDC3-203ENST00000471567 MMP10P09238 476 aa19.85■□□□□ 0.77
SDC3-203ENST00000471567 PIP4K2AP48426 406 aaPredicted RBP19.85■□□□□ 0.77
SDC3-203ENST00000471567 FKBP8Q14318 412 aa19.85■□□□□ 0.77
SDC3-203ENST00000471567 EIF2S2P20042 333 aaKnown RBP19.84■□□□□ 0.77
SDC3-203ENST00000471567 KRT24Q2M2I5 525 aa19.84■□□□□ 0.77
SDC3-203ENST00000471567 DZIP3Q86Y13 1208 aaKnown RBP19.84■□□□□ 0.77
SDC3-203ENST00000471567 FHDC1Q9C0D6 1143 aaPredicted RBP19.84■□□□□ 0.77
SDC3-203ENST00000471567 TBC1D2BQ9UPU7 963 aa19.84■□□□□ 0.77
SDC3-203ENST00000471567 RGL2O15211 777 aa19.83■□□□□ 0.77
SDC3-203ENST00000471567 DUSP27Q5VZP5 1158 aa19.83■□□□□ 0.77
SDC3-203ENST00000471567 BCL2L12Q9HB09 334 aa19.83■□□□□ 0.77
SDC3-203ENST00000471567 CAMTA2O94983 1202 aa19.82■□□□□ 0.76
SDC3-203ENST00000471567 TM4SF1P30408 202 aa19.82■□□□□ 0.76
SDC3-203ENST00000471567 SYT17Q9BSW7 474 aa19.82■□□□□ 0.76
SDC3-203ENST00000471567 PDIA6Q15084 440 aa19.81■□□□□ 0.76
SDC3-203ENST00000471567 CHMP4AQ9BY43 222 aa19.81■□□□□ 0.76
SDC3-203ENST00000471567 PARP3Q9Y6F1 533 aa19.81■□□□□ 0.76
SDC3-203ENST00000471567 ZNF521Q96K83 1311 aa19.8■□□□□ 0.76
SDC3-203ENST00000471567 MYL6BP14649 208 aa19.8■□□□□ 0.76
SDC3-203ENST00000471567 HDGFL1Q5TGJ6 251 aa19.8■□□□□ 0.76
SDC3-203ENST00000471567 CLEC4GQ6UXB4 293 aa19.8■□□□□ 0.76
SDC3-203ENST00000471567 TSR2Q969E8 191 aaKnown RBP19.8■□□□□ 0.76
SDC3-203ENST00000471567 CD2APQ9Y5K6 639 aa19.8■□□□□ 0.76
SDC3-203ENST00000471567 NFIXQ14938 502 aa19.79■□□□□ 0.76
SDC3-203ENST00000471567 C8orf58Q8NAV2 365 aa19.79■□□□□ 0.76
SDC3-203ENST00000471567 DDX21Q9NR30 783 aaKnown RBP eCLIP19.79■□□□□ 0.76
SDC3-203ENST00000471567 LRP10Q7Z4F1 713 aa19.78■□□□□ 0.76
SDC3-203ENST00000471567 ZNF652Q9Y2D9 606 aa19.78■□□□□ 0.76
SDC3-203ENST00000471567 SCN7AQ01118 1682 aa19.78■□□□□ 0.76
SDC3-203ENST00000471567 ERVV-1B6SEH8 477 aa19.77■□□□□ 0.76
SDC3-203ENST00000471567 POLRMTO00411 1230 aaKnown RBP19.77■□□□□ 0.76
SDC3-203ENST00000471567 DDR1Q08345 913 aa19.77■□□□□ 0.76
SDC3-203ENST00000471567 KLHL34Q8N239 644 aa19.77■□□□□ 0.76
SDC3-203ENST00000471567 NECTIN2Q92692 538 aa19.77■□□□□ 0.76
SDC3-203ENST00000471567 MYH16Q9H6N6 1097 aa19.77■□□□□ 0.76
SDC3-203ENST00000471567 DBF4Q9UBU7 674 aaPredicted RBP19.77■□□□□ 0.76
SDC3-203ENST00000471567 FANCIQ9NVI1 1328 aa19.76■□□□□ 0.75
SDC3-203ENST00000471567 ELL2O00472 640 aaPredicted RBP19.76■□□□□ 0.75
SDC3-203ENST00000471567 GOLGA2Q08379 1002 aa19.76■□□□□ 0.75
SDC3-203ENST00000471567 PROSER3Q2NL68 480 aa19.76■□□□□ 0.75
SDC3-203ENST00000471567 TBC1D9BQ66K14 1250 aa19.76■□□□□ 0.75
SDC3-203ENST00000471567 KIF6Q6ZMV9 814 aa19.76■□□□□ 0.75
SDC3-203ENST00000471567 MAP3K15Q6ZN16 1313 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms