RNA–Protein interactions for RNA: ENST00000470495.1

HOXB3-205, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 4,208 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-205ENST00000470495 RBM42Q9BTD8 480 aaKnown RBP19.94■□□□□ 0.78
HOXB3-205ENST00000470495 PLEKHM2Q8IWE5 1019 aa19.94■□□□□ 0.78
HOXB3-205ENST00000470495 ZNF592Q92610 1267 aa19.94■□□□□ 0.78
HOXB3-205ENST00000470495 IGSF3O75054 1194 aa19.94■□□□□ 0.78
HOXB3-205ENST00000470495 MX1P20591 662 aa19.94■□□□□ 0.78
HOXB3-205ENST00000470495 NEK4P51957 841 aa19.94■□□□□ 0.78
HOXB3-205ENST00000470495 CABP4P57796 275 aa19.94■□□□□ 0.78
HOXB3-205ENST00000470495 IGSF1Q8N6C5 1336 aa19.94■□□□□ 0.78
HOXB3-205ENST00000470495 SDSP20132 328 aa19.93■□□□□ 0.78
HOXB3-205ENST00000470495 HSP90AB4PQ58FF6 505 aa19.93■□□□□ 0.78
HOXB3-205ENST00000470495 DDX11L8A8MPP1 907 aa19.93■□□□□ 0.78
HOXB3-205ENST00000470495 K7ELQ4 463 aaPredicted RBP19.92■□□□□ 0.78
HOXB3-205ENST00000470495 CHAF1AQ13111 956 aaPredicted RBP19.92■□□□□ 0.78
HOXB3-205ENST00000470495 AKAP4Q5JQC9 854 aa19.92■□□□□ 0.78
HOXB3-205ENST00000470495 PPP1R42Q7Z4L9 355 aa19.92■□□□□ 0.78
HOXB3-205ENST00000470495 SIRT2Q8IXJ6 389 aa19.92■□□□□ 0.78
HOXB3-205ENST00000470495 DBF4Q9UBU7 674 aaPredicted RBP19.92■□□□□ 0.78
HOXB3-205ENST00000470495 COL3A1P02461 1466 aaPredicted RBP19.92■□□□□ 0.78
HOXB3-205ENST00000470495 RABEP1Q15276 862 aa19.92■□□□□ 0.78
HOXB3-205ENST00000470495 SYTL4Q96C24 671 aaPredicted RBP19.91■□□□□ 0.78
HOXB3-205ENST00000470495 KCNQ3O43525 872 aa19.91■□□□□ 0.78
HOXB3-205ENST00000470495 USP19O94966 1318 aa19.91■□□□□ 0.78
HOXB3-205ENST00000470495 BRPF1P55201 1214 aaPredicted RBP19.91■□□□□ 0.78
HOXB3-205ENST00000470495 MAP3K2Q9Y2U5 619 aa19.91■□□□□ 0.78
HOXB3-205ENST00000470495 CDC42BPGQ6DT37 1551 aa19.91■□□□□ 0.78
HOXB3-205ENST00000470495 KIAA0232Q92628 1395 aa19.9■□□□□ 0.78
HOXB3-205ENST00000470495 PIP4K2AP48426 406 aaPredicted RBP19.9■□□□□ 0.78
HOXB3-205ENST00000470495 ZNF830Q96NB3 372 aaPredicted RBP19.89■□□□□ 0.77
HOXB3-205ENST00000470495 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.89■□□□□ 0.77
HOXB3-205ENST00000470495 ZBTB9Q96C00 473 aa19.89■□□□□ 0.77
HOXB3-205ENST00000470495 PSMD1Q99460 953 aa19.88■□□□□ 0.77
HOXB3-205ENST00000470495 DDX49Q9Y6V7 483 aaKnown RBP19.88■□□□□ 0.77
HOXB3-205ENST00000470495 TECPR2O15040 1411 aa19.88■□□□□ 0.77
HOXB3-205ENST00000470495 CADPS2Q86UW7 1296 aa19.88■□□□□ 0.77
HOXB3-205ENST00000470495 ZBTB12Q9Y330 459 aaPredicted RBP19.88■□□□□ 0.77
HOXB3-205ENST00000470495 USP32Q8NFA0 1604 aa19.88■□□□□ 0.77
HOXB3-205ENST00000470495 UQCRHLA0A096LP55 91 aa19.88■□□□□ 0.77
HOXB3-205ENST00000470495 UQCRHP07919 91 aa19.88■□□□□ 0.77
HOXB3-205ENST00000470495 SMAP1Q8IYB5 467 aaPredicted RBP19.88■□□□□ 0.77
HOXB3-205ENST00000470495 PDE1AP54750 535 aa19.87■□□□□ 0.77
HOXB3-205ENST00000470495 TRAK2O60296 914 aa19.87■□□□□ 0.77
HOXB3-205ENST00000470495 PTCD1O75127 700 aaKnown RBP19.87■□□□□ 0.77
HOXB3-205ENST00000470495 PLCB2Q00722 1185 aa19.87■□□□□ 0.77
HOXB3-205ENST00000470495 CNTROBQ8N137 903 aa19.87■□□□□ 0.77
HOXB3-205ENST00000470495 JARID2Q92833 1246 aaPredicted RBP19.87■□□□□ 0.77
HOXB3-205ENST00000470495 MCM4P33991 863 aa19.87■□□□□ 0.77
HOXB3-205ENST00000470495 PNMA6EA0A0J9YXQ4 647 aa19.86■□□□□ 0.77
HOXB3-205ENST00000470495 RNMTO43148 476 aaKnown RBP19.86■□□□□ 0.77
HOXB3-205ENST00000470495 GORABQ5T7V8 394 aa19.86■□□□□ 0.77
HOXB3-205ENST00000470495 DNAJC2Q99543 621 aaKnown RBP19.86■□□□□ 0.77
HOXB3-205ENST00000470495 ATP8B2P98198 1209 aa19.86■□□□□ 0.77
HOXB3-205ENST00000470495 SHPRHQ149N8 1683 aa19.86■□□□□ 0.77
HOXB3-205ENST00000470495 GOLGA6L6A8MZA4 724 aa19.85■□□□□ 0.77
HOXB3-205ENST00000470495 CLCN1P35523 988 aa19.85■□□□□ 0.77
HOXB3-205ENST00000470495 NFATC2IPQ8NCF5 419 aa19.85■□□□□ 0.77
HOXB3-205ENST00000470495 BANK1Q8NDB2 785 aa19.85■□□□□ 0.77
HOXB3-205ENST00000470495 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.85■□□□□ 0.77
HOXB3-205ENST00000470495 KIF1BPQ96EK5 621 aa19.85■□□□□ 0.77
HOXB3-205ENST00000470495 RTL1A6NKG5 1358 aa19.85■□□□□ 0.77
HOXB3-205ENST00000470495 AACSQ86V21 672 aa19.84■□□□□ 0.77
HOXB3-205ENST00000470495 TRIM34Q9BYJ4 488 aa19.84■□□□□ 0.77
HOXB3-205ENST00000470495 OVOS2A0A0J9YW53 1432 aa19.84■□□□□ 0.77
HOXB3-205ENST00000470495 OVOS2Q6IE36 1432 aa19.84■□□□□ 0.77
HOXB3-205ENST00000470495 MCTP1Q6DN14 999 aa19.84■□□□□ 0.77
HOXB3-205ENST00000470495 MYD88Q99836 296 aa19.84■□□□□ 0.77
HOXB3-205ENST00000470495 ERICH4A6NGS2 130 aa19.84■□□□□ 0.77
HOXB3-205ENST00000470495 CWF19L2Q2TBE0 894 aaKnown RBP19.84■□□□□ 0.77
HOXB3-205ENST00000470495 CWC27Q6UX04 472 aaKnown RBP19.84■□□□□ 0.77
HOXB3-205ENST00000470495 RUFY2Q8WXA3 655 aa19.84■□□□□ 0.77
HOXB3-205ENST00000470495 MYCNP04198 464 aaPredicted RBP19.84■□□□□ 0.77
HOXB3-205ENST00000470495 UPF3BQ9BZI7 483 aaKnown RBP19.83■□□□□ 0.76
HOXB3-205ENST00000470495 GSPT1P15170 499 aaKnown RBP19.83■□□□□ 0.76
HOXB3-205ENST00000470495 IFNL2Q8IZJ0 200 aa19.83■□□□□ 0.76
HOXB3-205ENST00000470495 REREQ9P2R6 1566 aa19.82■□□□□ 0.76
HOXB3-205ENST00000470495 MAP2P11137 1827 aaKnown RBP19.82■□□□□ 0.76
HOXB3-205ENST00000470495 EIF4A1P60842 406 aaKnown RBP19.82■□□□□ 0.76
HOXB3-205ENST00000470495 NEUROD6Q96NK8 337 aa19.82■□□□□ 0.76
HOXB3-205ENST00000470495 NPHP3Q7Z494 1330 aa19.82■□□□□ 0.76
HOXB3-205ENST00000470495 USP31Q70CQ4 1352 aa19.82■□□□□ 0.76
HOXB3-205ENST00000470495 PTCH1Q13635 1447 aa19.82■□□□□ 0.76
HOXB3-205ENST00000470495 HYPKQ9NX55 129 aa19.81■□□□□ 0.76
HOXB3-205ENST00000470495 NPHP4O75161 1426 aaPredicted RBP19.81■□□□□ 0.76
HOXB3-205ENST00000470495 SETD1BQ9UPS6 1966 aaKnown RBP19.81■□□□□ 0.76
HOXB3-205ENST00000470495 RHPN1Q8TCX5 695 aa19.81■□□□□ 0.76
HOXB3-205ENST00000470495 NBPF7P0C2Y1 421 aaPredicted RBP19.8■□□□□ 0.76
HOXB3-205ENST00000470495 FSD1Q9BTV5 496 aa19.8■□□□□ 0.76
HOXB3-205ENST00000470495 ATP5J2-PTCD1G3V325 749 aa19.8■□□□□ 0.76
HOXB3-205ENST00000470495 HMGB1P09429 215 aaKnown RBP19.8■□□□□ 0.76
HOXB3-205ENST00000470495 NUCB2P80303 420 aa19.8■□□□□ 0.76
HOXB3-205ENST00000470495 PA2G4Q9UQ80 394 aaKnown RBP19.8■□□□□ 0.76
HOXB3-205ENST00000470495 RAB11FIP3O75154 756 aa19.79■□□□□ 0.76
HOXB3-205ENST00000470495 ARHGEF25Q86VW2 580 aa19.79■□□□□ 0.76
HOXB3-205ENST00000470495 CCDC8Q9H0W5 538 aaPredicted RBP19.79■□□□□ 0.76
HOXB3-205ENST00000470495 LARP1Q6PKG0 1096 aaKnown RBP19.79■□□□□ 0.76
HOXB3-205ENST00000470495 ERC1Q8IUD2 1116 aa19.78■□□□□ 0.76
HOXB3-205ENST00000470495 COPS6Q7L5N1 327 aa19.78■□□□□ 0.76
HOXB3-205ENST00000470495 XAGE3Q8WTP9 111 aa19.78■□□□□ 0.76
HOXB3-205ENST00000470495 ZNF622Q969S3 477 aaKnown RBP eCLIP19.78■□□□□ 0.76
HOXB3-205ENST00000470495 USP44Q9H0E7 712 aa19.78■□□□□ 0.76
HOXB3-205ENST00000470495 ANKARQ7Z5J8 1434 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 150.8 ms