RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 LDHAL6AQ6ZMR3 332 aa17.79■□□□□ 0.44
LIMS2-213ENST00000469300 DDX46Q7L014 1031 aaKnown RBP17.79■□□□□ 0.44
LIMS2-213ENST00000469300 NUP133Q8WUM0 1156 aa17.79■□□□□ 0.44
LIMS2-213ENST00000469300 RFC4P35249 363 aa17.79■□□□□ 0.44
LIMS2-213ENST00000469300 A0A1W2PP64 1363 aa17.79■□□□□ 0.44
LIMS2-213ENST00000469300 DCAF5Q96JK2 942 aa17.79■□□□□ 0.44
LIMS2-213ENST00000469300 BOLA2Q9H3K6 86 aa17.79■□□□□ 0.44
LIMS2-213ENST00000469300 ARHGEF5Q12774 1597 aa17.78■□□□□ 0.44
LIMS2-213ENST00000469300 DZIP1Q86YF9 867 aaKnown RBP17.78■□□□□ 0.44
LIMS2-213ENST00000469300 GPTP24298 496 aa17.78■□□□□ 0.44
LIMS2-213ENST00000469300 TMEM2Q9UHN6 1383 aa17.78■□□□□ 0.44
LIMS2-213ENST00000469300 CCDC196A0A1B0GTZ2 297 aa17.78■□□□□ 0.44
LIMS2-213ENST00000469300 NAPBQ9H115 298 aa17.78■□□□□ 0.44
LIMS2-213ENST00000469300 RNF41Q9H4P4 317 aaPredicted RBP17.78■□□□□ 0.44
LIMS2-213ENST00000469300 UBE3BQ7Z3V4 1068 aa17.78■□□□□ 0.44
LIMS2-213ENST00000469300 BRPF3Q9ULD4 1205 aa17.78■□□□□ 0.44
LIMS2-213ENST00000469300 EDC4Q6P2E9 1401 aaKnown RBP17.77■□□□□ 0.44
LIMS2-213ENST00000469300 USP5P45974 858 aa17.77■□□□□ 0.44
LIMS2-213ENST00000469300 EVI5LQ96CN4 794 aa17.77■□□□□ 0.43
LIMS2-213ENST00000469300 CFAP45Q9UL16 551 aa17.77■□□□□ 0.43
LIMS2-213ENST00000469300 LMTK3Q96Q04 1460 aa17.77■□□□□ 0.43
LIMS2-213ENST00000469300 EPS15P42566 896 aa17.76■□□□□ 0.43
LIMS2-213ENST00000469300 CCDC152Q4G0S7 254 aa17.76■□□□□ 0.43
LIMS2-213ENST00000469300 BABAM1Q9NWV8 329 aa17.76■□□□□ 0.43
LIMS2-213ENST00000469300 FIBPO43427 364 aa17.75■□□□□ 0.43
LIMS2-213ENST00000469300 FBLN1P23142 703 aa17.75■□□□□ 0.43
LIMS2-213ENST00000469300 STK3Q13188 491 aa17.75■□□□□ 0.43
LIMS2-213ENST00000469300 BCL11BQ9C0K0 894 aaPredicted RBP17.75■□□□□ 0.43
LIMS2-213ENST00000469300 KSR2Q6VAB6 950 aa17.75■□□□□ 0.43
LIMS2-213ENST00000469300 POLR3DP05423 398 aaPredicted RBP17.75■□□□□ 0.43
LIMS2-213ENST00000469300 UQCRFS1P1P0C7P4 283 aa17.75■□□□□ 0.43
LIMS2-213ENST00000469300 MAGI2Q86UL8 1455 aa17.75■□□□□ 0.43
LIMS2-213ENST00000469300 MRE11P49959 708 aa17.75■□□□□ 0.43
LIMS2-213ENST00000469300 SPTY2D1Q68D10 685 aaPredicted RBP17.75■□□□□ 0.43
LIMS2-213ENST00000469300 MAP3K19Q56UN5 1328 aa17.75■□□□□ 0.43
LIMS2-213ENST00000469300 MAP3K5Q99683 1374 aa17.75■□□□□ 0.43
LIMS2-213ENST00000469300 TRAK2O60296 914 aa17.74■□□□□ 0.43
LIMS2-213ENST00000469300 ABCA8O94911 1581 aa17.74■□□□□ 0.43
LIMS2-213ENST00000469300 DHX8Q14562 1220 aaKnown RBP17.74■□□□□ 0.43
LIMS2-213ENST00000469300 FILIP1LQ4L180 1135 aa17.74■□□□□ 0.43
LIMS2-213ENST00000469300 CCDC8Q9H0W5 538 aaPredicted RBP17.74■□□□□ 0.43
LIMS2-213ENST00000469300 COL17A1Q9UMD9 1497 aaPredicted RBP17.74■□□□□ 0.43
LIMS2-213ENST00000469300 HOXC9P31274 260 aa17.74■□□□□ 0.43
LIMS2-213ENST00000469300 ST5P78524 1137 aa17.74■□□□□ 0.43
LIMS2-213ENST00000469300 SH2B1Q9NRF2 756 aaPredicted RBP17.74■□□□□ 0.43
LIMS2-213ENST00000469300 ATP5J2-PTCD1G3V325 749 aa17.74■□□□□ 0.43
LIMS2-213ENST00000469300 RRP9O43818 475 aaKnown RBP17.74■□□□□ 0.43
LIMS2-213ENST00000469300 OFD1O75665 1012 aa17.74■□□□□ 0.43
LIMS2-213ENST00000469300 KRT18P05783 430 aaKnown RBP17.74■□□□□ 0.43
LIMS2-213ENST00000469300 MTHFSDQ2M296 383 aaKnown RBP17.74■□□□□ 0.43
LIMS2-213ENST00000469300 XAGE3Q8WTP9 111 aa17.74■□□□□ 0.43
LIMS2-213ENST00000469300 C8orf37Q96NL8 207 aa17.74■□□□□ 0.43
LIMS2-213ENST00000469300 EYA1Q99502 592 aa17.74■□□□□ 0.43
LIMS2-213ENST00000469300 CARD14Q9BXL6 1004 aa17.74■□□□□ 0.43
LIMS2-213ENST00000469300 MKNK2Q9HBH9 465 aa17.73■□□□□ 0.43
LIMS2-213ENST00000469300 SMARCA5O60264 1052 aaPredicted RBP17.73■□□□□ 0.43
LIMS2-213ENST00000469300 NBPF6Q5VWK0 638 aa17.73■□□□□ 0.43
LIMS2-213ENST00000469300 NBPF5PQ86XG9 351 aaPredicted RBP17.73■□□□□ 0.43
LIMS2-213ENST00000469300 IQCA1Q86XH1 822 aa17.73■□□□□ 0.43
LIMS2-213ENST00000469300 NBPF4Q96M43 638 aa17.73■□□□□ 0.43
LIMS2-213ENST00000469300 DACH1Q9UI36 760 aa17.73■□□□□ 0.43
LIMS2-213ENST00000469300 PCDH11XQ9BZA7 1347 aa17.73■□□□□ 0.43
LIMS2-213ENST00000469300 PCDH11YQ9BZA8 1340 aa17.73■□□□□ 0.43
LIMS2-213ENST00000469300 PRPF40AO75400 957 aaKnown RBP17.73■□□□□ 0.43
LIMS2-213ENST00000469300 CRACR2BQ8N4Y2 399 aaPredicted RBP17.73■□□□□ 0.43
LIMS2-213ENST00000469300 COPS6Q7L5N1 327 aa17.73■□□□□ 0.43
LIMS2-213ENST00000469300 CHPF2Q9P2E5 772 aa17.73■□□□□ 0.43
LIMS2-213ENST00000469300 ZRANB1Q9UGI0 708 aa17.73■□□□□ 0.43
LIMS2-213ENST00000469300 LINS1Q8NG48 757 aa17.72■□□□□ 0.43
LIMS2-213ENST00000469300 SBNO1A3KN83 1393 aa17.72■□□□□ 0.43
LIMS2-213ENST00000469300 ARHGEF10O15013 1369 aa17.72■□□□□ 0.43
LIMS2-213ENST00000469300 C6orf229H3BNL8 230 aa17.72■□□□□ 0.43
LIMS2-213ENST00000469300 CASTP20810 708 aaKnown RBP17.72■□□□□ 0.43
LIMS2-213ENST00000469300 ATP6V1AP38606 617 aa17.72■□□□□ 0.43
LIMS2-213ENST00000469300 ME1P48163 572 aa17.72■□□□□ 0.43
LIMS2-213ENST00000469300 STIM1Q13586 685 aa17.72■□□□□ 0.43
LIMS2-213ENST00000469300 BMP2KLQ5H9B9 411 aa17.72■□□□□ 0.43
LIMS2-213ENST00000469300 HOMER1Q86YM7 354 aa17.72■□□□□ 0.43
LIMS2-213ENST00000469300 SPINK5Q9NQ38 1064 aaPredicted RBP17.72■□□□□ 0.43
LIMS2-213ENST00000469300 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.72■□□□□ 0.43
LIMS2-213ENST00000469300 KDM4AO75164 1064 aa17.72■□□□□ 0.43
LIMS2-213ENST00000469300 HDAC1Q13547 482 aaPredicted RBP17.72■□□□□ 0.43
LIMS2-213ENST00000469300 CABLES1Q8TDN4 633 aa17.71■□□□□ 0.43
LIMS2-213ENST00000469300 TEX35Q5T0J7 233 aa17.71■□□□□ 0.43
LIMS2-213ENST00000469300 STK11IPQ8N1F8 1099 aa17.71■□□□□ 0.43
LIMS2-213ENST00000469300 SETDB2Q96T68 719 aa17.71■□□□□ 0.43
LIMS2-213ENST00000469300 MAGEC2Q9UBF1 373 aaPredicted RBP17.71■□□□□ 0.43
LIMS2-213ENST00000469300 PLEKHG3A1L390 1219 aa17.71■□□□□ 0.43
LIMS2-213ENST00000469300 WWC2Q6AWC2 1192 aa17.71■□□□□ 0.43
LIMS2-213ENST00000469300 BMP2KQ9NSY1 1161 aaPredicted RBP17.71■□□□□ 0.43
LIMS2-213ENST00000469300 GRM8O00222 908 aa17.7■□□□□ 0.42
LIMS2-213ENST00000469300 ZNF213O14771 459 aa17.7■□□□□ 0.42
LIMS2-213ENST00000469300 BAG3O95817 575 aa17.7■□□□□ 0.42
LIMS2-213ENST00000469300 GPS2Q13227 327 aa17.7■□□□□ 0.42
LIMS2-213ENST00000469300 NLRP3Q96P20 1036 aa17.7■□□□□ 0.42
LIMS2-213ENST00000469300 CEP131Q9UPN4 1083 aa17.7■□□□□ 0.42
LIMS2-213ENST00000469300 PRPF40BQ6NWY9 871 aaKnown RBP17.7■□□□□ 0.42
LIMS2-213ENST00000469300 CAVIN1Q6NZI2 390 aaKnown RBP17.7■□□□□ 0.42
LIMS2-213ENST00000469300 ZNF444Q8N0Y2 327 aaPredicted RBP17.7■□□□□ 0.42
LIMS2-213ENST00000469300 CTCFLQ8NI51 663 aaPredicted RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms