RNA–Protein interactions for RNA: ENST00000469147.5

TRAPPC12-215, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 1,002 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-215ENST00000469147 TRIM35Q9UPQ4 493 aa12.6□□□□□ -0.39
TRAPPC12-215ENST00000469147 RRP7AQ9Y3A4 280 aaKnown RBP12.6□□□□□ -0.39
TRAPPC12-215ENST00000469147 GOLGB1Q14789 3259 aaKnown RBP12.59□□□□□ -0.39
TRAPPC12-215ENST00000469147 KCPQ6ZWJ8 1503 aa12.59□□□□□ -0.39
TRAPPC12-215ENST00000469147 BTBD11A6QL63 1104 aa12.59□□□□□ -0.39
TRAPPC12-215ENST00000469147 VSIG10Q8N0Z9 540 aa12.59□□□□□ -0.39
TRAPPC12-215ENST00000469147 WWC3Q9ULE0 1092 aa12.59□□□□□ -0.39
TRAPPC12-215ENST00000469147 CD2APQ9Y5K6 639 aa12.59□□□□□ -0.39
TRAPPC12-215ENST00000469147 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.58□□□□□ -0.4
TRAPPC12-215ENST00000469147 DNAJC10Q8IXB1 793 aa12.58□□□□□ -0.4
TRAPPC12-215ENST00000469147 ZNF526Q8TF50 670 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC12-215ENST00000469147 GPBP1L1Q9HC44 474 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC12-215ENST00000469147 KDM3BQ7LBC6 1761 aa12.58□□□□□ -0.4
TRAPPC12-215ENST00000469147 GNPATO15228 680 aa12.57□□□□□ -0.4
TRAPPC12-215ENST00000469147 INTS5Q6P9B9 1019 aaKnown RBP12.57□□□□□ -0.4
TRAPPC12-215ENST00000469147 FMNL2Q96PY5 1086 aa12.57□□□□□ -0.4
TRAPPC12-215ENST00000469147 THUMPD2Q9BTF0 503 aaKnown RBP12.57□□□□□ -0.4
TRAPPC12-215ENST00000469147 YBX3P16989 372 aaKnown RBP eCLIP12.56□□□□□ -0.4
TRAPPC12-215ENST00000469147 TEX13AQ9BXU3 409 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC12-215ENST00000469147 HEG1Q9ULI3 1381 aa12.56□□□□□ -0.4
TRAPPC12-215ENST00000469147 PRAMEF22A3QJZ6 481 aa12.55□□□□□ -0.4
TRAPPC12-215ENST00000469147 TRAPPC3LQ5T215 181 aa12.55□□□□□ -0.4
TRAPPC12-215ENST00000469147 ARHGEF1Q92888 912 aaKnown RBP12.55□□□□□ -0.4
TRAPPC12-215ENST00000469147 ZNF496Q96IT1 587 aaPredicted RBP12.55□□□□□ -0.4
TRAPPC12-215ENST00000469147 SRP68Q9UHB9 627 aaKnown RBP12.55□□□□□ -0.4
TRAPPC12-215ENST00000469147 CNTNAP4Q9C0A0 1308 aa12.55□□□□□ -0.4
TRAPPC12-215ENST00000469147 SSFA2P28290 1259 aa12.54□□□□□ -0.4
TRAPPC12-215ENST00000469147 CRKLP46109 303 aaKnown RBP12.54□□□□□ -0.4
TRAPPC12-215ENST00000469147 RC3H1Q5TC82 1133 aaKnown RBP12.54□□□□□ -0.4
TRAPPC12-215ENST00000469147 WWC1Q8IX03 1113 aa12.54□□□□□ -0.4
TRAPPC12-215ENST00000469147 CFAP44Q96MT7 982 aa12.54□□□□□ -0.4
TRAPPC12-215ENST00000469147 IFT57Q9NWB7 429 aa12.54□□□□□ -0.4
TRAPPC12-215ENST00000469147 TSPYL4Q9UJ04 414 aa12.54□□□□□ -0.4
TRAPPC12-215ENST00000469147 RTCBQ9Y3I0 505 aaKnown RBP12.54□□□□□ -0.4
TRAPPC12-215ENST00000469147 IL16Q14005 1332 aa12.54□□□□□ -0.4
TRAPPC12-215ENST00000469147 C4AP0C0L4 1744 aa12.54□□□□□ -0.4
TRAPPC12-215ENST00000469147 CHD4Q14839 1912 aa12.53□□□□□ -0.4
TRAPPC12-215ENST00000469147 CHL1O00533 1208 aa12.53□□□□□ -0.4
TRAPPC12-215ENST00000469147 GNAI1P63096 354 aa12.53□□□□□ -0.4
TRAPPC12-215ENST00000469147 MIS18AQ9NYP9 233 aa12.53□□□□□ -0.4
TRAPPC12-215ENST00000469147 RPS6KA4O75676 772 aa12.52□□□□□ -0.41
TRAPPC12-215ENST00000469147 STARD3NLO95772 234 aa12.52□□□□□ -0.41
TRAPPC12-215ENST00000469147 SNRPA1P09661 255 aaKnown RBP12.52□□□□□ -0.41
TRAPPC12-215ENST00000469147 ZNF853P0CG23 659 aa12.52□□□□□ -0.41
TRAPPC12-215ENST00000469147 CYP19A1P11511 503 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC12-215ENST00000469147 RFC4P35249 363 aa12.52□□□□□ -0.41
TRAPPC12-215ENST00000469147 EIF4A1P60842 406 aaKnown RBP12.52□□□□□ -0.41
TRAPPC12-215ENST00000469147 WDR63Q8IWG1 891 aa12.52□□□□□ -0.41
TRAPPC12-215ENST00000469147 LAMB4A4D0S4 1761 aa12.51□□□□□ -0.41
TRAPPC12-215ENST00000469147 GYS1P13807 737 aa12.51□□□□□ -0.41
TRAPPC12-215ENST00000469147 PIP4K2AP48426 406 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC12-215ENST00000469147 NLGN1Q8N2Q7 840 aa12.51□□□□□ -0.41
TRAPPC12-215ENST00000469147 ZBTB1Q9Y2K1 713 aa12.51□□□□□ -0.41
TRAPPC12-215ENST00000469147 PARP3Q9Y6F1 533 aa12.51□□□□□ -0.41
TRAPPC12-215ENST00000469147 MMP10P09238 476 aa12.5□□□□□ -0.41
TRAPPC12-215ENST00000469147 ADRA2BP18089 450 aa12.5□□□□□ -0.41
TRAPPC12-215ENST00000469147 FKBP8Q14318 412 aa12.5□□□□□ -0.41
TRAPPC12-215ENST00000469147 BCL2L12Q9HB09 334 aa12.5□□□□□ -0.41
TRAPPC12-215ENST00000469147 CCDC87Q9NVE4 849 aa12.5□□□□□ -0.41
TRAPPC12-215ENST00000469147 BCS1LQ9Y276 419 aa12.5□□□□□ -0.41
TRAPPC12-215ENST00000469147 LAS1LQ9Y4W2 734 aaKnown RBP12.5□□□□□ -0.41
TRAPPC12-215ENST00000469147 ATP10DQ9P241 1426 aa12.49□□□□□ -0.41
TRAPPC12-215ENST00000469147 ZNF521Q96K83 1311 aa12.49□□□□□ -0.41
TRAPPC12-215ENST00000469147 HOXB7P09629 217 aa12.49□□□□□ -0.41
TRAPPC12-215ENST00000469147 ARHGAP27Q6ZUM4 889 aa12.49□□□□□ -0.41
TRAPPC12-215ENST00000469147 MBIPQ9NS73 344 aa12.49□□□□□ -0.41
TRAPPC12-215ENST00000469147 USP16Q9Y5T5 823 aa12.49□□□□□ -0.41
TRAPPC12-215ENST00000469147 KIAA1551Q9HCM1 1747 aa12.48□□□□□ -0.41
TRAPPC12-215ENST00000469147 SOS1Q07889 1333 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC12-215ENST00000469147 A1BGP04217 495 aa12.48□□□□□ -0.41
TRAPPC12-215ENST00000469147 DDR1Q08345 913 aa12.48□□□□□ -0.41
TRAPPC12-215ENST00000469147 ERBB4Q15303 1308 aa12.47□□□□□ -0.41
TRAPPC12-215ENST00000469147 C16orf71Q8IYS4 520 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC12-215ENST00000469147 CHMP4AQ9BY43 222 aa12.47□□□□□ -0.41
TRAPPC12-215ENST00000469147 SALL2Q9Y467 1007 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC12-215ENST00000469147 N4BP2Q86UW6 1770 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC12-215ENST00000469147 A0A0G2JLW4 131 aa12.46□□□□□ -0.41
TRAPPC12-215ENST00000469147 CANXP27824 592 aaKnown RBP12.46□□□□□ -0.41
TRAPPC12-215ENST00000469147 IL6STP40189 918 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC12-215ENST00000469147 TGFB2P61812 414 aa12.46□□□□□ -0.41
TRAPPC12-215ENST00000469147 MYH16Q9H6N6 1097 aa12.46□□□□□ -0.41
TRAPPC12-215ENST00000469147 USP42Q9H9J4 1324 aaKnown RBP12.45□□□□□ -0.42
TRAPPC12-215ENST00000469147 GOLGA2Q08379 1002 aa12.45□□□□□ -0.42
TRAPPC12-215ENST00000469147 USPL1Q5W0Q7 1092 aa12.45□□□□□ -0.42
TRAPPC12-215ENST00000469147 COL15A1P39059 1388 aa12.44□□□□□ -0.42
TRAPPC12-215ENST00000469147 FANCIQ9NVI1 1328 aa12.44□□□□□ -0.42
TRAPPC12-215ENST00000469147 A0A087WZG4 1122 aa12.44□□□□□ -0.42
TRAPPC12-215ENST00000469147 E9PSI1 815 aa12.44□□□□□ -0.42
TRAPPC12-215ENST00000469147 TM4SF1P30408 202 aa12.44□□□□□ -0.42
TRAPPC12-215ENST00000469147 EIF5P55010 431 aaKnown RBP12.44□□□□□ -0.42
TRAPPC12-215ENST00000469147 NPM2Q86SE8 214 aaKnown RBP12.44□□□□□ -0.42
TRAPPC12-215ENST00000469147 AFDNP55196 1824 aaKnown RBP12.44□□□□□ -0.42
TRAPPC12-215ENST00000469147 KIF13BQ9NQT8 1826 aa12.44□□□□□ -0.42
TRAPPC12-215ENST00000469147 NBPF26B4DH59 902 aa12.43□□□□□ -0.42
TRAPPC12-215ENST00000469147 ZPR1O75312 459 aa12.43□□□□□ -0.42
TRAPPC12-215ENST00000469147 HSPA6P17066 643 aa12.43□□□□□ -0.42
TRAPPC12-215ENST00000469147 KCNA3P22001 575 aa12.43□□□□□ -0.42
TRAPPC12-215ENST00000469147 DUSP27Q5VZP5 1158 aa12.43□□□□□ -0.42
TRAPPC12-215ENST00000469147 NBPF10Q6P3W6 841 aaKnown RBP12.43□□□□□ -0.42
TRAPPC12-215ENST00000469147 NBPF15Q8N660 670 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms