RNA–Protein interactions for RNA: ENST00000468777.5

PCCB-208, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene PCCB, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-208ENST00000468777 STK32BQ9NY57 414 aa24.73■■□□□ 1.55
PCCB-208ENST00000468777 ELL2O00472 640 aaPredicted RBP24.72■■□□□ 1.55
PCCB-208ENST00000468777 AK7Q96M32 723 aa24.72■■□□□ 1.55
PCCB-208ENST00000468777 LAMB4A4D0S4 1761 aa24.72■■□□□ 1.55
PCCB-208ENST00000468777 PSDA5PKW4 1024 aaPredicted RBP24.72■■□□□ 1.55
PCCB-208ENST00000468777 R3HDM1Q15032 1099 aaKnown RBP24.72■■□□□ 1.55
PCCB-208ENST00000468777 TFCP2L1Q9NZI6 479 aa24.72■■□□□ 1.55
PCCB-208ENST00000468777 GNPATO15228 680 aa24.71■■□□□ 1.55
PCCB-208ENST00000468777 PIP4K2AP48426 406 aaPredicted RBP24.71■■□□□ 1.55
PCCB-208ENST00000468777 C8orf58Q8NAV2 365 aa24.71■■□□□ 1.55
PCCB-208ENST00000468777 ZBED9Q6R2W3 1325 aa24.71■■□□□ 1.55
PCCB-208ENST00000468777 UBR3Q6ZT12 1888 aa24.71■■□□□ 1.55
PCCB-208ENST00000468777 STARD3NLO95772 234 aa24.7■■□□□ 1.55
PCCB-208ENST00000468777 TEX13AQ9BXU3 409 aaPredicted RBP24.7■■□□□ 1.55
PCCB-208ENST00000468777 CNTNAP4Q9C0A0 1308 aa24.7■■□□□ 1.54
PCCB-208ENST00000468777 INTS5Q6P9B9 1019 aaKnown RBP24.7■■□□□ 1.54
PCCB-208ENST00000468777 TSPYL6Q8N831 410 aa24.7■■□□□ 1.54
PCCB-208ENST00000468777 NECTIN2Q92692 538 aa24.7■■□□□ 1.54
PCCB-208ENST00000468777 MYH16Q9H6N6 1097 aa24.7■■□□□ 1.54
PCCB-208ENST00000468777 ZBTB1Q9Y2K1 713 aa24.7■■□□□ 1.54
PCCB-208ENST00000468777 PHF14O94880 888 aa24.69■■□□□ 1.54
PCCB-208ENST00000468777 A1BGP04217 495 aa24.69■■□□□ 1.54
PCCB-208ENST00000468777 EIF2S2P20042 333 aaKnown RBP24.69■■□□□ 1.54
PCCB-208ENST00000468777 CCDC87Q9NVE4 849 aa24.69■■□□□ 1.54
PCCB-208ENST00000468777 GTF3C3Q9Y5Q9 886 aa24.69■■□□□ 1.54
PCCB-208ENST00000468777 E9PSI1 815 aa24.68■■□□□ 1.54
PCCB-208ENST00000468777 SLFN5Q08AF3 891 aa24.68■■□□□ 1.54
PCCB-208ENST00000468777 DUSP27Q5VZP5 1158 aa24.68■■□□□ 1.54
PCCB-208ENST00000468777 PDGFDQ9GZP0 370 aaPredicted RBP24.68■■□□□ 1.54
PCCB-208ENST00000468777 CANXP27824 592 aaKnown RBP24.67■■□□□ 1.54
PCCB-208ENST00000468777 EXOSC9Q06265 439 aaKnown RBP24.67■■□□□ 1.54
PCCB-208ENST00000468777 RC3H1Q5TC82 1133 aaKnown RBP24.67■■□□□ 1.54
PCCB-208ENST00000468777 PNPLA7Q6ZV29 1317 aa24.66■■□□□ 1.54
PCCB-208ENST00000468777 HMGB2P26583 209 aaKnown RBP24.65■■□□□ 1.54
PCCB-208ENST00000468777 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.64■■□□□ 1.54
PCCB-208ENST00000468777 RTCBQ9Y3I0 505 aaKnown RBP24.64■■□□□ 1.54
PCCB-208ENST00000468777 ZNF330Q9Y3S2 320 aaPredicted RBP24.64■■□□□ 1.54
PCCB-208ENST00000468777 NBPF26B4DH59 902 aa24.63■■□□□ 1.53
PCCB-208ENST00000468777 RPS6KA4O75676 772 aa24.63■■□□□ 1.53
PCCB-208ENST00000468777 TWISTNBQ3B726 338 aaPredicted RBP24.63■■□□□ 1.53
PCCB-208ENST00000468777 HDGFL1Q5TGJ6 251 aa24.63■■□□□ 1.53
PCCB-208ENST00000468777 NBPF10Q6P3W6 841 aaKnown RBP24.63■■□□□ 1.53
PCCB-208ENST00000468777 NBPF15Q8N660 670 aa24.63■■□□□ 1.53
PCCB-208ENST00000468777 QSER1Q2KHR3 1735 aa24.63■■□□□ 1.53
PCCB-208ENST00000468777 SOS1Q07889 1333 aaPredicted RBP24.62■■□□□ 1.53
PCCB-208ENST00000468777 ANXA1P04083 346 aa24.62■■□□□ 1.53
PCCB-208ENST00000468777 HOXB7P09629 217 aa24.62■■□□□ 1.53
PCCB-208ENST00000468777 COL23A1Q86Y22 540 aaPredicted RBP24.62■■□□□ 1.53
PCCB-208ENST00000468777 TRMT2AQ8IZ69 625 aaKnown RBP24.62■■□□□ 1.53
PCCB-208ENST00000468777 MSH5O43196 834 aa24.61■■□□□ 1.53
PCCB-208ENST00000468777 MYL6BP14649 208 aa24.6■■□□□ 1.53
PCCB-208ENST00000468777 SSFA2P28290 1259 aa24.6■■□□□ 1.53
PCCB-208ENST00000468777 C4AP0C0L4 1744 aa24.6■■□□□ 1.53
PCCB-208ENST00000468777 PROSER3Q2NL68 480 aa24.6■■□□□ 1.53
PCCB-208ENST00000468777 COL15A1P39059 1388 aa24.59■■□□□ 1.53
PCCB-208ENST00000468777 TCERG1O14776 1098 aaKnown RBP24.59■■□□□ 1.53
PCCB-208ENST00000468777 TRAPPC3LQ5T215 181 aa24.59■■□□□ 1.53
PCCB-208ENST00000468777 ARHGEF1Q92888 912 aaKnown RBP24.59■■□□□ 1.53
PCCB-208ENST00000468777 CHPF2Q9P2E5 772 aa24.59■■□□□ 1.53
PCCB-208ENST00000468777 CASZ1Q86V15 1759 aa24.58■■□□□ 1.53
PCCB-208ENST00000468777 EIF5P55010 431 aaKnown RBP24.58■■□□□ 1.53
PCCB-208ENST00000468777 PDIA6Q15084 440 aa24.58■■□□□ 1.53
PCCB-208ENST00000468777 IL6STP40189 918 aaPredicted RBP24.58■■□□□ 1.52
PCCB-208ENST00000468777 VAMP4O75379 141 aa24.57■■□□□ 1.52
PCCB-208ENST00000468777 ARXQ96QS3 562 aa24.56■■□□□ 1.52
PCCB-208ENST00000468777 ADRA2BP18089 450 aa24.55■■□□□ 1.52
PCCB-208ENST00000468777 RFC4P35249 363 aa24.55■■□□□ 1.52
PCCB-208ENST00000468777 FLAD1Q8NFF5 587 aa24.55■■□□□ 1.52
PCCB-208ENST00000468777 SRP68Q9UHB9 627 aaKnown RBP24.55■■□□□ 1.52
PCCB-208ENST00000468777 TBC1D2BQ9UPU7 963 aa24.55■■□□□ 1.52
PCCB-208ENST00000468777 ERBB4Q15303 1308 aa24.54■■□□□ 1.52
PCCB-208ENST00000468777 ZBTB7AO95365 584 aa24.53■■□□□ 1.52
PCCB-208ENST00000468777 LRP10Q7Z4F1 713 aa24.53■■□□□ 1.52
PCCB-208ENST00000468777 NPM2Q86SE8 214 aaKnown RBP24.53■■□□□ 1.52
PCCB-208ENST00000468777 DDX21Q9NR30 783 aaKnown RBP eCLIP24.53■■□□□ 1.52
PCCB-208ENST00000468777 CCDC30Q5VVM6 783 aa24.53■■□□□ 1.52
PCCB-208ENST00000468777 DBF4Q9UBU7 674 aaPredicted RBP24.53■■□□□ 1.52
PCCB-208ENST00000468777 MSL1Q68DK7 614 aa24.51■■□□□ 1.51
PCCB-208ENST00000468777 DZIP3Q86Y13 1208 aaKnown RBP24.51■■□□□ 1.51
PCCB-208ENST00000468777 USP42Q9H9J4 1324 aaKnown RBP24.51■■□□□ 1.51
PCCB-208ENST00000468777 AIMP1Q12904 312 aaKnown RBP24.5■■□□□ 1.51
PCCB-208ENST00000468777 USPL1Q5W0Q7 1092 aa24.5■■□□□ 1.51
PCCB-208ENST00000468777 TTLL7Q6ZT98 887 aa24.5■■□□□ 1.51
PCCB-208ENST00000468777 ZPR1O75312 459 aa24.49■■□□□ 1.51
PCCB-208ENST00000468777 STK31Q9BXU1 1019 aa24.49■■□□□ 1.51
PCCB-208ENST00000468777 PHAXQ9H814 394 aaKnown RBP24.49■■□□□ 1.51
PCCB-208ENST00000468777 NARFQ9UHQ1 456 aa24.49■■□□□ 1.51
PCCB-208ENST00000468777 A0A087WZG4 1122 aa24.48■■□□□ 1.51
PCCB-208ENST00000468777 COPS6Q7L5N1 327 aa24.48■■□□□ 1.51
PCCB-208ENST00000468777 XAGE3Q8WTP9 111 aa24.48■■□□□ 1.51
PCCB-208ENST00000468777 ATF5Q9Y2D1 282 aaPredicted RBP24.48■■□□□ 1.51
PCCB-208ENST00000468777 SLC4A2P04920 1241 aa24.47■■□□□ 1.51
PCCB-208ENST00000468777 GYS1P13807 737 aa24.47■■□□□ 1.51
PCCB-208ENST00000468777 SCN7AQ01118 1682 aa24.47■■□□□ 1.51
PCCB-208ENST00000468777 BCORQ6W2J9 1755 aa24.47■■□□□ 1.51
PCCB-208ENST00000468777 HYPKQ9NX55 129 aa24.47■■□□□ 1.51
PCCB-208ENST00000468777 CAMTA2O94983 1202 aa24.46■■□□□ 1.51
PCCB-208ENST00000468777 BCL2L13Q9BXK5 485 aa24.46■■□□□ 1.51
PCCB-208ENST00000468777 CHMP4AQ9BY43 222 aa24.46■■□□□ 1.51
PCCB-208ENST00000468777 ZBTB3Q9H5J0 574 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms