RNA–Protein interactions for RNA: ENST00000468479.5

FDPS-207, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 938 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-207ENST00000468479 TSR2Q969E8 191 aaKnown RBP17.14■□□□□ 0.33
FDPS-207ENST00000468479 ATG3Q9NT62 314 aa17.14■□□□□ 0.33
FDPS-207ENST00000468479 SSFA2P28290 1259 aa17.13■□□□□ 0.33
FDPS-207ENST00000468479 BRPF1P55201 1214 aaPredicted RBP17.13■□□□□ 0.33
FDPS-207ENST00000468479 COL23A1Q86Y22 540 aaPredicted RBP17.13■□□□□ 0.33
FDPS-207ENST00000468479 RTF1Q92541 710 aaKnown RBP17.13■□□□□ 0.33
FDPS-207ENST00000468479 CRBNQ96SW2 442 aa17.13■□□□□ 0.33
FDPS-207ENST00000468479 CEP350Q5VT06 3117 aa17.13■□□□□ 0.33
FDPS-207ENST00000468479 CANXP27824 592 aaKnown RBP17.12■□□□□ 0.33
FDPS-207ENST00000468479 RBM42Q9BTD8 480 aaKnown RBP17.12■□□□□ 0.33
FDPS-207ENST00000468479 TOGARAM1Q9Y4F4 1720 aa17.12■□□□□ 0.33
FDPS-207ENST00000468479 DLG5Q8TDM6 1919 aa17.11■□□□□ 0.33
FDPS-207ENST00000468479 BABAM1Q9NWV8 329 aa17.11■□□□□ 0.33
FDPS-207ENST00000468479 GOLGB1Q14789 3259 aaKnown RBP17.1■□□□□ 0.33
FDPS-207ENST00000468479 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.1■□□□□ 0.33
FDPS-207ENST00000468479 CHL1O00533 1208 aa17.1■□□□□ 0.33
FDPS-207ENST00000468479 GNPATO15228 680 aa17.1■□□□□ 0.33
FDPS-207ENST00000468479 IPO8O15397 1037 aaKnown RBP17.1■□□□□ 0.33
FDPS-207ENST00000468479 PHF14O94880 888 aa17.1■□□□□ 0.33
FDPS-207ENST00000468479 MTHFSDQ2M296 383 aaKnown RBP17.1■□□□□ 0.33
FDPS-207ENST00000468479 LINC00116Q8NCU8 138 aa17.1■□□□□ 0.33
FDPS-207ENST00000468479 KDM6AO15550 1401 aaPredicted RBP17.1■□□□□ 0.33
FDPS-207ENST00000468479 C5P01031 1676 aa17.1■□□□□ 0.33
FDPS-207ENST00000468479 C20orf194Q5TEA3 1177 aa17.09■□□□□ 0.33
FDPS-207ENST00000468479 NFATC2IPQ8NCF5 419 aa17.09■□□□□ 0.33
FDPS-207ENST00000468479 MBIPQ9NS73 344 aa17.09■□□□□ 0.33
FDPS-207ENST00000468479 KIF16BQ96L93 1317 aa17.09■□□□□ 0.33
FDPS-207ENST00000468479 GNAT3A8MTJ3 354 aa17.08■□□□□ 0.32
FDPS-207ENST00000468479 ITPK1Q13572 414 aa17.08■□□□□ 0.32
FDPS-207ENST00000468479 ZKSCAN2Q63HK3 967 aa17.08■□□□□ 0.32
FDPS-207ENST00000468479 SMC4Q9NTJ3 1288 aa17.08■□□□□ 0.32
FDPS-207ENST00000468479 RTCBQ9Y3I0 505 aaKnown RBP17.08■□□□□ 0.32
FDPS-207ENST00000468479 LAS1LQ9Y4W2 734 aaKnown RBP17.08■□□□□ 0.32
FDPS-207ENST00000468479 SOS1Q07889 1333 aaPredicted RBP17.07■□□□□ 0.32
FDPS-207ENST00000468479 ADRA2BP18089 450 aa17.07■□□□□ 0.32
FDPS-207ENST00000468479 RC3H1Q5TC82 1133 aaKnown RBP17.07■□□□□ 0.32
FDPS-207ENST00000468479 THUMPD2Q9BTF0 503 aaKnown RBP17.07■□□□□ 0.32
FDPS-207ENST00000468479 SLC52A2Q9HAB3 445 aa17.07■□□□□ 0.32
FDPS-207ENST00000468479 ITGB4P16144 1822 aa17.07■□□□□ 0.32
FDPS-207ENST00000468479 C4BP0C0L5 1744 aa17.07■□□□□ 0.32
FDPS-207ENST00000468479 VAMP4O75379 141 aa17.06■□□□□ 0.32
FDPS-207ENST00000468479 MSL1Q68DK7 614 aa17.06■□□□□ 0.32
FDPS-207ENST00000468479 SSH1Q8WYL5 1049 aa17.06■□□□□ 0.32
FDPS-207ENST00000468479 CNTNAP4Q9C0A0 1308 aa17.05■□□□□ 0.32
FDPS-207ENST00000468479 PTCD1O75127 700 aaKnown RBP17.05■□□□□ 0.32
FDPS-207ENST00000468479 TRAPPC3LQ5T215 181 aa17.05■□□□□ 0.32
FDPS-207ENST00000468479 ARHGAP45Q92619 1136 aa17.05■□□□□ 0.32
FDPS-207ENST00000468479 FRAT1Q92837 279 aaPredicted RBP17.05■□□□□ 0.32
FDPS-207ENST00000468479 RNMTO43148 476 aaKnown RBP17.04■□□□□ 0.32
FDPS-207ENST00000468479 MCM10Q7L590 875 aa17.04■□□□□ 0.32
FDPS-207ENST00000468479 CD2APQ9Y5K6 639 aa17.04■□□□□ 0.32
FDPS-207ENST00000468479 DCTN1Q14203 1278 aa17.03■□□□□ 0.32
FDPS-207ENST00000468479 TWISTNBQ3B726 338 aaPredicted RBP17.03■□□□□ 0.32
FDPS-207ENST00000468479 DZIP1LQ8IYY4 767 aaKnown RBP17.03■□□□□ 0.32
FDPS-207ENST00000468479 RPS6KA4O75676 772 aa17.02■□□□□ 0.32
FDPS-207ENST00000468479 RFC4P35249 363 aa17.02■□□□□ 0.32
FDPS-207ENST00000468479 TEFQ10587 303 aa17.02■□□□□ 0.32
FDPS-207ENST00000468479 ATF7IPQ6VMQ6 1270 aa17.02■□□□□ 0.32
FDPS-207ENST00000468479 TTC5Q8N0Z6 440 aa17.02■□□□□ 0.32
FDPS-207ENST00000468479 NLGN1Q8N2Q7 840 aa17.02■□□□□ 0.32
FDPS-207ENST00000468479 CHMP4AQ9BY43 222 aa17.02■□□□□ 0.32
FDPS-207ENST00000468479 ATP10DQ9P241 1426 aa17.02■□□□□ 0.31
FDPS-207ENST00000468479 CENPQQ7L2Z9 268 aaPredicted RBP17.01■□□□□ 0.31
FDPS-207ENST00000468479 FTSJ3Q8IY81 847 aaKnown RBP17.01■□□□□ 0.31
FDPS-207ENST00000468479 NLGN2Q8NFZ4 835 aa17.01■□□□□ 0.31
FDPS-207ENST00000468479 SLC4A9Q96Q91 983 aa17.01■□□□□ 0.31
FDPS-207ENST00000468479 CHMP4BQ9H444 224 aaKnown RBP17.01■□□□□ 0.31
FDPS-207ENST00000468479 LGR6Q9HBX8 967 aa17.01■□□□□ 0.31
FDPS-207ENST00000468479 TAF7Q15545 349 aaPredicted RBP17■□□□□ 0.31
FDPS-207ENST00000468479 MRC1P22897 1456 aa16.99■□□□□ 0.31
FDPS-207ENST00000468479 TAF1LQ8IZX4 1826 aa16.99■□□□□ 0.31
FDPS-207ENST00000468479 GRIN3BO60391 1043 aa16.99■□□□□ 0.31
FDPS-207ENST00000468479 CRKLP46109 303 aaKnown RBP16.99■□□□□ 0.31
FDPS-207ENST00000468479 MVPQ14764 893 aaKnown RBP16.99■□□□□ 0.31
FDPS-207ENST00000468479 AMIGO3Q86WK7 504 aa16.99■□□□□ 0.31
FDPS-207ENST00000468479 VSIG10Q8N0Z9 540 aa16.99■□□□□ 0.31
FDPS-207ENST00000468479 MRPL50Q8N5N7 158 aaKnown RBP16.99■□□□□ 0.31
FDPS-207ENST00000468479 C8orf58Q8NAV2 365 aa16.99■□□□□ 0.31
FDPS-207ENST00000468479 PANK1Q8TE04 598 aa16.99■□□□□ 0.31
FDPS-207ENST00000468479 CLUAP1Q96AJ1 413 aa16.99■□□□□ 0.31
FDPS-207ENST00000468479 BCL2L13Q9BXK5 485 aa16.99■□□□□ 0.31
FDPS-207ENST00000468479 TSPYL4Q9UJ04 414 aa16.99■□□□□ 0.31
FDPS-207ENST00000468479 NOB1Q9ULX3 412 aaKnown RBP16.99■□□□□ 0.31
FDPS-207ENST00000468479 ZNF831Q5JPB2 1677 aa16.99■□□□□ 0.31
FDPS-207ENST00000468479 CEMIPQ8WUJ3 1361 aa16.99■□□□□ 0.31
FDPS-207ENST00000468479 COG6Q9Y2V7 657 aa16.98■□□□□ 0.31
FDPS-207ENST00000468479 TRIM27P14373 513 aa16.97■□□□□ 0.31
FDPS-207ENST00000468479 TSPYL6Q8N831 410 aa16.97■□□□□ 0.31
FDPS-207ENST00000468479 IL17REQ8NFR9 667 aa16.97■□□□□ 0.31
FDPS-207ENST00000468479 ARHGEF1Q92888 912 aaKnown RBP16.97■□□□□ 0.31
FDPS-207ENST00000468479 API5Q9BZZ5 524 aaKnown RBP16.97■□□□□ 0.31
FDPS-207ENST00000468479 DDX19BQ9UMR2 479 aa16.97■□□□□ 0.31
FDPS-207ENST00000468479 KDM2BQ8NHM5 1336 aa16.96■□□□□ 0.31
FDPS-207ENST00000468479 STARD3NLO95772 234 aa16.96■□□□□ 0.31
FDPS-207ENST00000468479 MMP10P09238 476 aa16.96■□□□□ 0.31
FDPS-207ENST00000468479 YBX3P16989 372 aaKnown RBP eCLIP16.96■□□□□ 0.31
FDPS-207ENST00000468479 CCDC87Q9NVE4 849 aa16.96■□□□□ 0.31
FDPS-207ENST00000468479 RLBP1P12271 317 aa16.95■□□□□ 0.3
FDPS-207ENST00000468479 SLC39A6Q13433 755 aa16.95■□□□□ 0.3
FDPS-207ENST00000468479 SMIM5Q71RC9 77 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms