RNA–Protein interactions for RNA: ENST00000467957.1

YBX1-204, Transcript of Y-box binding protein 1, humanhuman

TSL 2

Gene YBX1, Length 770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-204ENST00000467957 LMOD3Q0VAK6 560 aa24.59■■□□□ 1.53
YBX1-204ENST00000467957 NLGN1Q8N2Q7 840 aa24.59■■□□□ 1.53
YBX1-204ENST00000467957 ZBTB1Q9Y2K1 713 aa24.59■■□□□ 1.53
YBX1-204ENST00000467957 KDM3BQ7LBC6 1761 aa24.57■■□□□ 1.52
YBX1-204ENST00000467957 GYS1P13807 737 aa24.57■■□□□ 1.52
YBX1-204ENST00000467957 THUMPD2Q9BTF0 503 aaKnown RBP24.57■■□□□ 1.52
YBX1-204ENST00000467957 USP42Q9H9J4 1324 aaKnown RBP24.57■■□□□ 1.52
YBX1-204ENST00000467957 SNRPA1P09661 255 aaKnown RBP24.55■■□□□ 1.52
YBX1-204ENST00000467957 CCDC184Q52MB2 194 aa24.55■■□□□ 1.52
YBX1-204ENST00000467957 COL15A1P39059 1388 aa24.54■■□□□ 1.52
YBX1-204ENST00000467957 MIS18AQ9NYP9 233 aa24.54■■□□□ 1.52
YBX1-204ENST00000467957 MMP10P09238 476 aa24.53■■□□□ 1.52
YBX1-204ENST00000467957 EIF5P55010 431 aaKnown RBP24.53■■□□□ 1.52
YBX1-204ENST00000467957 BABAM1Q9NWV8 329 aa24.53■■□□□ 1.52
YBX1-204ENST00000467957 RRP7AQ9Y3A4 280 aaKnown RBP24.53■■□□□ 1.52
YBX1-204ENST00000467957 CD2APQ9Y5K6 639 aa24.53■■□□□ 1.52
YBX1-204ENST00000467957 CANXP27824 592 aaKnown RBP24.52■■□□□ 1.52
YBX1-204ENST00000467957 KLHL34Q8N239 644 aa24.52■■□□□ 1.52
YBX1-204ENST00000467957 SRP68Q9UHB9 627 aaKnown RBP24.52■■□□□ 1.52
YBX1-204ENST00000467957 USP16Q9Y5T5 823 aa24.52■■□□□ 1.52
YBX1-204ENST00000467957 DCAF8L1A6NGE4 600 aa24.51■■□□□ 1.51
YBX1-204ENST00000467957 IL6STP40189 918 aaPredicted RBP24.51■■□□□ 1.51
YBX1-204ENST00000467957 NEUROD2Q15784 382 aa24.51■■□□□ 1.51
YBX1-204ENST00000467957 NARFQ9UHQ1 456 aa24.51■■□□□ 1.51
YBX1-204ENST00000467957 TRIM35Q9UPQ4 493 aa24.51■■□□□ 1.51
YBX1-204ENST00000467957 PRAMEF22A3QJZ6 481 aa24.5■■□□□ 1.51
YBX1-204ENST00000467957 ZPR1O75312 459 aa24.5■■□□□ 1.51
YBX1-204ENST00000467957 A0A087WZG4 1122 aa24.49■■□□□ 1.51
YBX1-204ENST00000467957 A1BGP04217 495 aa24.49■■□□□ 1.51
YBX1-204ENST00000467957 EIF4A1P60842 406 aaKnown RBP24.49■■□□□ 1.51
YBX1-204ENST00000467957 LAMB4A4D0S4 1761 aa24.48■■□□□ 1.51
YBX1-204ENST00000467957 FKBP8Q14318 412 aa24.48■■□□□ 1.51
YBX1-204ENST00000467957 USPL1Q5W0Q7 1092 aa24.48■■□□□ 1.51
YBX1-204ENST00000467957 NLGN2Q8NFZ4 835 aa24.48■■□□□ 1.51
YBX1-204ENST00000467957 MRS2Q9HD23 443 aa24.48■■□□□ 1.51
YBX1-204ENST00000467957 GIGYF1O75420 1035 aaPredicted RBP24.47■■□□□ 1.51
YBX1-204ENST00000467957 TSPYL4Q9UJ04 414 aa24.47■■□□□ 1.51
YBX1-204ENST00000467957 APAF1O14727 1248 aa24.46■■□□□ 1.51
YBX1-204ENST00000467957 TM4SF1P30408 202 aa24.45■■□□□ 1.5
YBX1-204ENST00000467957 PARP3Q9Y6F1 533 aa24.45■■□□□ 1.5
YBX1-204ENST00000467957 KIF13BQ9NQT8 1826 aa24.45■■□□□ 1.5
YBX1-204ENST00000467957 BCL2L12Q9HB09 334 aa24.44■■□□□ 1.5
YBX1-204ENST00000467957 NPM2Q86SE8 214 aaKnown RBP24.43■■□□□ 1.5
YBX1-204ENST00000467957 CHL1O00533 1208 aa24.42■■□□□ 1.5
YBX1-204ENST00000467957 DDR1Q08345 913 aa24.42■■□□□ 1.5
YBX1-204ENST00000467957 SCN7AQ01118 1682 aa24.42■■□□□ 1.5
YBX1-204ENST00000467957 C10orf71Q711Q0 1435 aa24.42■■□□□ 1.5
YBX1-204ENST00000467957 NBPF26B4DH59 902 aa24.41■■□□□ 1.5
YBX1-204ENST00000467957 NBPF10Q6P3W6 841 aaKnown RBP24.41■■□□□ 1.5
YBX1-204ENST00000467957 NBPF15Q8N660 670 aa24.41■■□□□ 1.5
YBX1-204ENST00000467957 ZNF330Q9Y3S2 320 aaPredicted RBP24.41■■□□□ 1.5
YBX1-204ENST00000467957 POLRMTO00411 1230 aaKnown RBP24.4■■□□□ 1.5
YBX1-204ENST00000467957 NFIXQ14938 502 aa24.4■■□□□ 1.5
YBX1-204ENST00000467957 TBC1D2BQ9UPU7 963 aa24.4■■□□□ 1.5
YBX1-204ENST00000467957 PIP4K2AP48426 406 aaPredicted RBP24.39■■□□□ 1.49
YBX1-204ENST00000467957 CAMTA2O94983 1202 aa24.38■■□□□ 1.49
YBX1-204ENST00000467957 TGFB2P61812 414 aa24.38■■□□□ 1.49
YBX1-204ENST00000467957 DZIP3Q86Y13 1208 aaKnown RBP24.38■■□□□ 1.49
YBX1-204ENST00000467957 CFAP44Q96MT7 982 aa24.38■■□□□ 1.49
YBX1-204ENST00000467957 BCORQ6W2J9 1755 aa24.38■■□□□ 1.49
YBX1-204ENST00000467957 CALD1Q05682 793 aaKnown RBP24.37■■□□□ 1.49
YBX1-204ENST00000467957 GPR162Q16538 588 aa24.37■■□□□ 1.49
YBX1-204ENST00000467957 NCBP3Q53F19 620 aaKnown RBP24.37■■□□□ 1.49
YBX1-204ENST00000467957 KIAA1551Q9HCM1 1747 aa24.37■■□□□ 1.49
YBX1-204ENST00000467957 ERBB4Q15303 1308 aa24.36■■□□□ 1.49
YBX1-204ENST00000467957 NRXN2Q9P2S2 1712 aa24.36■■□□□ 1.49
YBX1-204ENST00000467957 RGL2O15211 777 aa24.36■■□□□ 1.49
YBX1-204ENST00000467957 PXDNLA1KZ92 1463 aa24.35■■□□□ 1.49
YBX1-204ENST00000467957 ZNF853P0CG23 659 aa24.35■■□□□ 1.49
YBX1-204ENST00000467957 LAS1LQ9Y4W2 734 aaKnown RBP24.35■■□□□ 1.49
YBX1-204ENST00000467957 AFDNP55196 1824 aaKnown RBP24.34■■□□□ 1.49
YBX1-204ENST00000467957 CCDC27Q2M243 656 aa24.34■■□□□ 1.49
YBX1-204ENST00000467957 CLEC4GQ6UXB4 293 aa24.34■■□□□ 1.49
YBX1-204ENST00000467957 TBC1D9BQ66K14 1250 aa24.33■■□□□ 1.49
YBX1-204ENST00000467957 IFT57Q9NWB7 429 aa24.33■■□□□ 1.49
YBX1-204ENST00000467957 SERPINB2P05120 415 aa24.32■■□□□ 1.48
YBX1-204ENST00000467957 YBX3P16989 372 aaKnown RBP eCLIP24.31■■□□□ 1.483e-22■□□□□ 8.8
YBX1-204ENST00000467957 GNAI1P63096 354 aa24.31■■□□□ 1.48
YBX1-204ENST00000467957 PELP1Q8IZL8 1130 aaKnown RBP24.31■■□□□ 1.48
YBX1-204ENST00000467957 MBIPQ9NS73 344 aa24.31■■□□□ 1.48
YBX1-204ENST00000467957 ZNF652Q9Y2D9 606 aa24.31■■□□□ 1.48
YBX1-204ENST00000467957 N4BP2Q86UW6 1770 aaPredicted RBP24.31■■□□□ 1.48
YBX1-204ENST00000467957 GRIN3BO60391 1043 aa24.3■■□□□ 1.48
YBX1-204ENST00000467957 HOXB7P09629 217 aa24.3■■□□□ 1.48
YBX1-204ENST00000467957 BICDL1Q6ZP65 573 aa24.3■■□□□ 1.48
YBX1-204ENST00000467957 CARMIL3Q8ND23 1372 aa24.29■■□□□ 1.48
YBX1-204ENST00000467957 EIF2S2P20042 333 aaKnown RBP24.29■■□□□ 1.48
YBX1-204ENST00000467957 SETDB2Q96T68 719 aa24.29■■□□□ 1.48
YBX1-204ENST00000467957 A0A0G2JLW4 131 aa24.28■■□□□ 1.48
YBX1-204ENST00000467957 MYL6BP14649 208 aa24.28■■□□□ 1.48
YBX1-204ENST00000467957 PDIA6Q15084 440 aa24.28■■□□□ 1.48
YBX1-204ENST00000467957 KRT24Q2M2I5 525 aa24.28■■□□□ 1.48
YBX1-204ENST00000467957 LRP10Q7Z4F1 713 aa24.28■■□□□ 1.48
YBX1-204ENST00000467957 ERVV-1B6SEH8 477 aa24.27■■□□□ 1.48
YBX1-204ENST00000467957 DPEP1P16444 411 aa24.27■■□□□ 1.48
YBX1-204ENST00000467957 KCNA3P22001 575 aa24.27■■□□□ 1.48
YBX1-204ENST00000467957 WWC1Q8IX03 1113 aa24.27■■□□□ 1.48
YBX1-204ENST00000467957 BRCA1P38398 1863 aaKnown RBP24.27■■□□□ 1.48
YBX1-204ENST00000467957 CHD4Q14839 1912 aa24.26■■□□□ 1.47
YBX1-204ENST00000467957 NGEFQ8N5V2 710 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms