RNA–Protein interactions for RNA: ENST00000465788.1

SRM-203, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 402 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-203ENST00000465788 ARHGAP27Q6ZUM4 889 aa17.22■□□□□ 0.35
SRM-203ENST00000465788 ZNF526Q8TF50 670 aaPredicted RBP17.22■□□□□ 0.35
SRM-203ENST00000465788 NARFQ9UHQ1 456 aa17.22■□□□□ 0.35
SRM-203ENST00000465788 COL15A1P39059 1388 aa17.22■□□□□ 0.35
SRM-203ENST00000465788 A0A087WZG4 1122 aa17.21■□□□□ 0.35
SRM-203ENST00000465788 POLRMTO00411 1230 aaKnown RBP17.21■□□□□ 0.35
SRM-203ENST00000465788 DDR1Q08345 913 aa17.21■□□□□ 0.35
SRM-203ENST00000465788 USPL1Q5W0Q7 1092 aa17.2■□□□□ 0.34
SRM-203ENST00000465788 NUDCQ9Y266 331 aa17.2■□□□□ 0.34
SRM-203ENST00000465788 HSPA6P17066 643 aa17.19■□□□□ 0.34
SRM-203ENST00000465788 KCNA3P22001 575 aa17.19■□□□□ 0.34
SRM-203ENST00000465788 ZBTB1Q9Y2K1 713 aa17.19■□□□□ 0.34
SRM-203ENST00000465788 SIPA1L3O60292 1781 aaPredicted RBP17.18■□□□□ 0.34
SRM-203ENST00000465788 AFDNP55196 1824 aaKnown RBP17.18■□□□□ 0.34
SRM-203ENST00000465788 NRXN2Q9P2S2 1712 aa17.18■□□□□ 0.34
SRM-203ENST00000465788 ZNF790Q6PG37 636 aa17.17■□□□□ 0.34
SRM-203ENST00000465788 NPM2Q86SE8 214 aaKnown RBP17.17■□□□□ 0.34
SRM-203ENST00000465788 HEG1Q9ULI3 1381 aa17.16■□□□□ 0.34
SRM-203ENST00000465788 KIF3CO14782 793 aa17.16■□□□□ 0.34
SRM-203ENST00000465788 NFIXQ14938 502 aa17.16■□□□□ 0.34
SRM-203ENST00000465788 FMNL2Q96PY5 1086 aa17.16■□□□□ 0.34
SRM-203ENST00000465788 PDZRN3Q9UPQ7 1066 aa17.16■□□□□ 0.34
SRM-203ENST00000465788 CEMIPQ8WUJ3 1361 aa17.15■□□□□ 0.34
SRM-203ENST00000465788 CANXP27824 592 aaKnown RBP17.15■□□□□ 0.34
SRM-203ENST00000465788 EIF5P55010 431 aaKnown RBP17.15■□□□□ 0.34
SRM-203ENST00000465788 IL17REQ8NFR9 667 aa17.15■□□□□ 0.34
SRM-203ENST00000465788 DLEC1Q9Y238 1755 aa17.15■□□□□ 0.34
SRM-203ENST00000465788 TOMM70O94826 608 aa17.14■□□□□ 0.33
SRM-203ENST00000465788 SERPINB2P05120 415 aa17.14■□□□□ 0.33
SRM-203ENST00000465788 C9orf131Q5VYM1 1079 aa17.14■□□□□ 0.33
SRM-203ENST00000465788 ZNF496Q96IT1 587 aaPredicted RBP17.14■□□□□ 0.33
SRM-203ENST00000465788 KDM2BQ8NHM5 1336 aa17.14■□□□□ 0.33
SRM-203ENST00000465788 ZC3H4Q9UPT8 1303 aaKnown RBP17.14■□□□□ 0.33
SRM-203ENST00000465788 CHRNA5P30532 468 aa17.13■□□□□ 0.33
SRM-203ENST00000465788 PRKAR2BP31323 418 aa17.13■□□□□ 0.33
SRM-203ENST00000465788 IL6STP40189 918 aaPredicted RBP17.13■□□□□ 0.33
SRM-203ENST00000465788 CNGB1Q14028 1251 aaPredicted RBP17.13■□□□□ 0.33
SRM-203ENST00000465788 RSPH6AQ9H0K4 717 aa17.13■□□□□ 0.33
SRM-203ENST00000465788 SBF1O95248 1867 aa17.12■□□□□ 0.33
SRM-203ENST00000465788 RTF1Q92541 710 aaKnown RBP17.12■□□□□ 0.33
SRM-203ENST00000465788 BCL2L12Q9HB09 334 aa17.12■□□□□ 0.33
SRM-203ENST00000465788 SCN7AQ01118 1682 aa17.12■□□□□ 0.33
SRM-203ENST00000465788 BTBD11A6QL63 1104 aa17.11■□□□□ 0.33
SRM-203ENST00000465788 H0YIN7 160 aa17.11■□□□□ 0.33
SRM-203ENST00000465788 C16orf71Q8IYS4 520 aaPredicted RBP17.11■□□□□ 0.33
SRM-203ENST00000465788 TTLL6Q8N841 843 aa17.11■□□□□ 0.33
SRM-203ENST00000465788 RNF181Q9P0P0 153 aa17.11■□□□□ 0.33
SRM-203ENST00000465788 HTATSF1O43719 755 aaKnown RBP17.1■□□□□ 0.33
SRM-203ENST00000465788 U2AF1L5P0DN76 240 aaPredicted RBP17.1■□□□□ 0.33
SRM-203ENST00000465788 APLP1P51693 650 aa17.1■□□□□ 0.33
SRM-203ENST00000465788 U2AF1Q01081 240 aaKnown RBP eCLIP17.1■□□□□ 0.33
SRM-203ENST00000465788 NEFMP07197 916 aa17.09■□□□□ 0.33
SRM-203ENST00000465788 PPP2R1AP30153 589 aa17.09■□□□□ 0.33
SRM-203ENST00000465788 PDE6BP35913 854 aa17.09■□□□□ 0.33
SRM-203ENST00000465788 RBM46Q8TBY0 533 aaKnown RBP17.09■□□□□ 0.33
SRM-203ENST00000465788 CARMIL3Q8ND23 1372 aa17.09■□□□□ 0.33
SRM-203ENST00000465788 TNRC6CQ9HCJ0 1690 aaKnown RBP17.09■□□□□ 0.33
SRM-203ENST00000465788 CEP350Q5VT06 3117 aa17.09■□□□□ 0.33
SRM-203ENST00000465788 C2CD5Q86YS7 1000 aa17.08■□□□□ 0.32
SRM-203ENST00000465788 PHACTR3Q96KR7 559 aa17.08■□□□□ 0.32
SRM-203ENST00000465788 LMNB1P20700 586 aa17.07■□□□□ 0.32
SRM-203ENST00000465788 BRIP1Q9BX63 1249 aa17.07■□□□□ 0.32
SRM-203ENST00000465788 NMRK2Q9NPI5 230 aa17.07■□□□□ 0.32
SRM-203ENST00000465788 ZNF330Q9Y3S2 320 aaPredicted RBP17.07■□□□□ 0.32
SRM-203ENST00000465788 RGL2O15211 777 aa17.06■□□□□ 0.32
SRM-203ENST00000465788 SNRPA1P09661 255 aaKnown RBP17.06■□□□□ 0.32
SRM-203ENST00000465788 FSTL1Q12841 308 aa17.06■□□□□ 0.32
SRM-203ENST00000465788 BICDL1Q6ZP65 573 aa17.06■□□□□ 0.32
SRM-203ENST00000465788 SETDB2Q96T68 719 aa17.06■□□□□ 0.32
SRM-203ENST00000465788 BCORQ6W2J9 1755 aa17.05■□□□□ 0.32
SRM-203ENST00000465788 NPHP1O15259 732 aa17.05■□□□□ 0.32
SRM-203ENST00000465788 TBC1D9BQ66K14 1250 aa17.05■□□□□ 0.32
SRM-203ENST00000465788 CLEC4GQ6UXB4 293 aa17.05■□□□□ 0.32
SRM-203ENST00000465788 TBC1D2BQ9UPU7 963 aa17.05■□□□□ 0.32
SRM-203ENST00000465788 ZNF652Q9Y2D9 606 aa17.05■□□□□ 0.32
SRM-203ENST00000465788 ANKRD31Q8N7Z5 1873 aa17.04■□□□□ 0.32
SRM-203ENST00000465788 A1BGP04217 495 aa17.04■□□□□ 0.32
SRM-203ENST00000465788 ST5P78524 1137 aa17.04■□□□□ 0.32
SRM-203ENST00000465788 DZIP3Q86Y13 1208 aaKnown RBP17.04■□□□□ 0.32
SRM-203ENST00000465788 CNBD1Q8NA66 436 aa17.04■□□□□ 0.32
SRM-203ENST00000465788 CCDC88AQ3V6T2 1871 aa17.03■□□□□ 0.32
SRM-203ENST00000465788 CAMTA2O94983 1202 aa17.03■□□□□ 0.32
SRM-203ENST00000465788 PRR5LQ6MZQ0 368 aa17.03■□□□□ 0.32
SRM-203ENST00000465788 PNNQ9H307 717 aaKnown RBP17.03■□□□□ 0.32
SRM-203ENST00000465788 SOGA3Q5TF21 947 aa17.02■□□□□ 0.32
SRM-203ENST00000465788 PNISRQ8TF01 805 aaKnown RBP17.02■□□□□ 0.32
SRM-203ENST00000465788 CNKSR1Q969H4 720 aa17.02■□□□□ 0.32
SRM-203ENST00000465788 ZNF622Q969S3 477 aaKnown RBP eCLIP17.02■□□□□ 0.32
SRM-203ENST00000465788 RASSF7Q02833 373 aa17.01■□□□□ 0.31
SRM-203ENST00000465788 TAF7Q15545 349 aaPredicted RBP17.01■□□□□ 0.31
SRM-203ENST00000465788 MCM10Q7L590 875 aa17.01■□□□□ 0.31
SRM-203ENST00000465788 USP16Q9Y5T5 823 aa17.01■□□□□ 0.31
SRM-203ENST00000465788 DICER1Q9UPY3 1922 aaKnown RBP17.01■□□□□ 0.31
SRM-203ENST00000465788 GLTPD2A6NH11 291 aa17■□□□□ 0.31
SRM-203ENST00000465788 KCNQ3O43525 872 aa17■□□□□ 0.31
SRM-203ENST00000465788 STYK1Q6J9G0 422 aa17■□□□□ 0.31
SRM-203ENST00000465788 TIAM2Q8IVF5 1701 aa17■□□□□ 0.31
SRM-203ENST00000465788 SMC1BQ8NDV3 1235 aa17■□□□□ 0.31
SRM-203ENST00000465788 RRAGCQ9HB90 399 aa17■□□□□ 0.31
SRM-203ENST00000465788 ARFGEF2Q9Y6D5 1785 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms