RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 HOXD11P31277 338 aaPredicted RBP16.16■□□□□ 0.18
CNOT4-208ENST00000465721 PANK3Q9H999 370 aa16.16■□□□□ 0.18
CNOT4-208ENST00000465721 RNF181Q9P0P0 153 aa16.16■□□□□ 0.18
CNOT4-208ENST00000465721 HTRA3P83110 453 aa16.15■□□□□ 0.18
CNOT4-208ENST00000465721 FER1L6Q2WGJ9 1857 aa16.15■□□□□ 0.18
CNOT4-208ENST00000465721 SULT6B1Q6IMI4 303 aa16.15■□□□□ 0.18
CNOT4-208ENST00000465721 SOS1Q07889 1333 aaPredicted RBP16.15■□□□□ 0.18
CNOT4-208ENST00000465721 KDM2BQ8NHM5 1336 aa16.15■□□□□ 0.18
CNOT4-208ENST00000465721 TM4SF1P30408 202 aa16.14■□□□□ 0.17
CNOT4-208ENST00000465721 FSTL1Q12841 308 aa16.14■□□□□ 0.17
CNOT4-208ENST00000465721 IL13P35225 146 aa16.13■□□□□ 0.17
CNOT4-208ENST00000465721 TRIM26Q12899 539 aaPredicted RBP16.13■□□□□ 0.17
CNOT4-208ENST00000465721 DNAJC10Q8IXB1 793 aa16.13■□□□□ 0.17
CNOT4-208ENST00000465721 C16orf71Q8IYS4 520 aaPredicted RBP16.13■□□□□ 0.17
CNOT4-208ENST00000465721 JMYQ8N9B5 988 aa16.13■□□□□ 0.17
CNOT4-208ENST00000465721 KLRG1Q96E93 195 aa16.13■□□□□ 0.17
CNOT4-208ENST00000465721 COL15A1P39059 1388 aa16.13■□□□□ 0.17
CNOT4-208ENST00000465721 HSPA5P11021 654 aaKnown RBP16.12■□□□□ 0.17
CNOT4-208ENST00000465721 RASSF7Q02833 373 aa16.12■□□□□ 0.17
CNOT4-208ENST00000465721 USPL1Q5W0Q7 1092 aa16.12■□□□□ 0.17
CNOT4-208ENST00000465721 MORC1Q86VD1 984 aa16.12■□□□□ 0.17
CNOT4-208ENST00000465721 ARFGEF2Q9Y6D5 1785 aa16.12■□□□□ 0.17
CNOT4-208ENST00000465721 CLSPNQ9HAW4 1339 aa16.12■□□□□ 0.17
CNOT4-208ENST00000465721 AKAP4Q5JQC9 854 aa16.11■□□□□ 0.17
CNOT4-208ENST00000465721 SLC52A2Q9HAB3 445 aa16.11■□□□□ 0.17
CNOT4-208ENST00000465721 RRAGCQ9HB90 399 aa16.11■□□□□ 0.17
CNOT4-208ENST00000465721 ZC3H4Q9UPT8 1303 aaKnown RBP16.11■□□□□ 0.17
CNOT4-208ENST00000465721 CARMIL3Q8ND23 1372 aa16.11■□□□□ 0.17
CNOT4-208ENST00000465721 BCORQ6W2J9 1755 aa16.1■□□□□ 0.17
CNOT4-208ENST00000465721 CYP19A1P11511 503 aaPredicted RBP16.1■□□□□ 0.17
CNOT4-208ENST00000465721 PRELPP51888 382 aa16.1■□□□□ 0.17
CNOT4-208ENST00000465721 EIF4G2P78344 907 aaKnown RBP eCLIP16.1■□□□□ 0.17
CNOT4-208ENST00000465721 ZPR1O75312 459 aa16.09■□□□□ 0.17
CNOT4-208ENST00000465721 NFIXQ14938 502 aa16.09■□□□□ 0.17
CNOT4-208ENST00000465721 BCL2L12Q9HB09 334 aa16.09■□□□□ 0.17
CNOT4-208ENST00000465721 LGR6Q9HBX8 967 aa16.09■□□□□ 0.17
CNOT4-208ENST00000465721 ZBTB1Q9Y2K1 713 aa16.09■□□□□ 0.17
CNOT4-208ENST00000465721 SLC39A6Q13433 755 aa16.08■□□□□ 0.16
CNOT4-208ENST00000465721 NARFQ9UHQ1 456 aa16.08■□□□□ 0.16
CNOT4-208ENST00000465721 RNMTO43148 476 aaKnown RBP16.07■□□□□ 0.16
CNOT4-208ENST00000465721 COL13A1Q5TAT6 717 aaPredicted RBP16.07■□□□□ 0.16
CNOT4-208ENST00000465721 SMC1BQ8NDV3 1235 aa16.07■□□□□ 0.16
CNOT4-208ENST00000465721 LMNB1P20700 586 aa16.06■□□□□ 0.16
CNOT4-208ENST00000465721 AMER1Q5JTC6 1135 aaPredicted RBP16.06■□□□□ 0.16
CNOT4-208ENST00000465721 SLX4Q8IY92 1834 aa16.05■□□□□ 0.16
CNOT4-208ENST00000465721 COL3A1P02461 1466 aaPredicted RBP16.04■□□□□ 0.16
CNOT4-208ENST00000465721 NFKBIEO00221 500 aa16.04■□□□□ 0.16
CNOT4-208ENST00000465721 SERPINB2P05120 415 aa16.04■□□□□ 0.16
CNOT4-208ENST00000465721 KNSTRNQ9Y448 316 aa16.04■□□□□ 0.16
CNOT4-208ENST00000465721 GLTPD2A6NH11 291 aa16.03■□□□□ 0.16
CNOT4-208ENST00000465721 HMOX1P09601 288 aa16.03■□□□□ 0.16
CNOT4-208ENST00000465721 VSIG10Q8N0Z9 540 aa16.03■□□□□ 0.16
CNOT4-208ENST00000465721 TTLL6Q8N841 843 aa16.03■□□□□ 0.16
CNOT4-208ENST00000465721 MTHFSDQ2M296 383 aaKnown RBP16.02■□□□□ 0.16
CNOT4-208ENST00000465721 C2CD5Q86YS7 1000 aa16.02■□□□□ 0.16
CNOT4-208ENST00000465721 VEGFAP15692 232 aaPredicted RBP16.01■□□□□ 0.15
CNOT4-208ENST00000465721 EIF5P55010 431 aaKnown RBP16■□□□□ 0.15
CNOT4-208ENST00000465721 SCN4AP35499 1836 aa16■□□□□ 0.15
CNOT4-208ENST00000465721 POTECB2RU33 542 aa15.99■□□□□ 0.15
CNOT4-208ENST00000465721 CANXP27824 592 aaKnown RBP15.99■□□□□ 0.15
CNOT4-208ENST00000465721 H0YIN7 160 aa15.98■□□□□ 0.15
CNOT4-208ENST00000465721 TBC1D9BQ66K14 1250 aa15.98■□□□□ 0.15
CNOT4-208ENST00000465721 BICDL1Q6ZP65 573 aa15.98■□□□□ 0.15
CNOT4-208ENST00000465721 HEG1Q9ULI3 1381 aa15.98■□□□□ 0.15
CNOT4-208ENST00000465721 PRR5LQ6MZQ0 368 aa15.97■□□□□ 0.15
CNOT4-208ENST00000465721 TNS4Q8IZW8 715 aa15.97■□□□□ 0.15
CNOT4-208ENST00000465721 PCGF6Q9BYE7 350 aa15.97■□□□□ 0.15
CNOT4-208ENST00000465721 KIF7Q2M1P5 1343 aa15.96■□□□□ 0.15
CNOT4-208ENST00000465721 A0A087WZG4 1122 aa15.96■□□□□ 0.15
CNOT4-208ENST00000465721 DIAPH1O60610 1272 aaKnown RBP15.96■□□□□ 0.15
CNOT4-208ENST00000465721 STARD3NLO95772 234 aa15.96■□□□□ 0.15
CNOT4-208ENST00000465721 HSPA1AP0DMV8 641 aaKnown RBP15.96■□□□□ 0.15
CNOT4-208ENST00000465721 HSPA1BP0DMV9 641 aaKnown RBP15.96■□□□□ 0.15
CNOT4-208ENST00000465721 TTC5Q8N0Z6 440 aa15.96■□□□□ 0.15
CNOT4-208ENST00000465721 ZNF496Q96IT1 587 aaPredicted RBP15.96■□□□□ 0.15
CNOT4-208ENST00000465721 LTBP3Q9NS15 1303 aa15.95■□□□□ 0.14
CNOT4-208ENST00000465721 BRIP1Q9BX63 1249 aa15.95■□□□□ 0.14
CNOT4-208ENST00000465721 LAMB4A4D0S4 1761 aa15.95■□□□□ 0.14
CNOT4-208ENST00000465721 C21orf2O43822 256 aa15.94■□□□□ 0.14
CNOT4-208ENST00000465721 CAPN15O75808 1086 aa15.94■□□□□ 0.14
CNOT4-208ENST00000465721 PDE6BP35913 854 aa15.94■□□□□ 0.14
CNOT4-208ENST00000465721 ZNF790Q6PG37 636 aa15.94■□□□□ 0.14
CNOT4-208ENST00000465721 CCDC24Q8N4L8 307 aa15.94■□□□□ 0.14
CNOT4-208ENST00000465721 ZNF622Q969S3 477 aaKnown RBP eCLIP15.94■□□□□ 0.14
CNOT4-208ENST00000465721 PDZRN3Q9UPQ7 1066 aa15.94■□□□□ 0.14
CNOT4-208ENST00000465721 ADAMTSL1Q8N6G6 1762 aa15.94■□□□□ 0.14
CNOT4-208ENST00000465721 CEMIPQ8WUJ3 1361 aa15.93■□□□□ 0.14
CNOT4-208ENST00000465721 PER1O15534 1290 aaPredicted RBP15.93■□□□□ 0.14
CNOT4-208ENST00000465721 IL6STP40189 918 aaPredicted RBP15.93■□□□□ 0.14
CNOT4-208ENST00000465721 ERFEQ4G0M1 354 aa15.93■□□□□ 0.14
CNOT4-208ENST00000465721 IL17REQ8NFR9 667 aa15.93■□□□□ 0.14
CNOT4-208ENST00000465721 TBC1D2BQ9UPU7 963 aa15.93■□□□□ 0.14
CNOT4-208ENST00000465721 CAMTA2O94983 1202 aa15.92■□□□□ 0.14
CNOT4-208ENST00000465721 TEFQ10587 303 aa15.92■□□□□ 0.14
CNOT4-208ENST00000465721 DPY19L2Q6NUT2 758 aa15.92■□□□□ 0.14
CNOT4-208ENST00000465721 TAOK3Q9H2K8 898 aa15.92■□□□□ 0.14
CNOT4-208ENST00000465721 ZNF219Q9P2Y4 722 aaPredicted RBP15.92■□□□□ 0.14
CNOT4-208ENST00000465721 GNAT3A8MTJ3 354 aa15.91■□□□□ 0.14
CNOT4-208ENST00000465721 CC2D1BQ5T0F9 858 aaKnown RBP15.91■□□□□ 0.14
CNOT4-208ENST00000465721 TEX13AQ9BXU3 409 aaPredicted RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms