RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 ZCRB1Q8TBF4 217 aaKnown RBP13.55□□□□□ -0.24
APP-213ENST00000464867 TMC2Q8TDI7 906 aa13.55□□□□□ -0.24
APP-213ENST00000464867 USP54Q70EL1 1684 aa13.55□□□□□ -0.24
APP-213ENST00000464867 EVC2Q86UK5 1308 aa13.55□□□□□ -0.24
APP-213ENST00000464867 KIAA1210Q9ULL0 1709 aa13.55□□□□□ -0.24
APP-213ENST00000464867 FCHSD2O94868 740 aa13.54□□□□□ -0.24
APP-213ENST00000464867 TAF1LQ8IZX4 1826 aa13.54□□□□□ -0.24
APP-213ENST00000464867 KTN1Q86UP2 1357 aaKnown RBP13.54□□□□□ -0.24
APP-213ENST00000464867 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.53□□□□□ -0.24
APP-213ENST00000464867 C10orf71Q711Q0 1435 aa13.53□□□□□ -0.24
APP-213ENST00000464867 A0A0G2JLW4 131 aa13.52□□□□□ -0.25
APP-213ENST00000464867 VARS2Q5ST30 1063 aaKnown RBP13.52□□□□□ -0.25
APP-213ENST00000464867 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.52□□□□□ -0.25
APP-213ENST00000464867 LTV1Q96GA3 475 aaPredicted RBP13.52□□□□□ -0.25
APP-213ENST00000464867 KCPQ6ZWJ8 1503 aa13.52□□□□□ -0.25
APP-213ENST00000464867 TNRC6CQ9HCJ0 1690 aaKnown RBP13.52□□□□□ -0.25
APP-213ENST00000464867 FAM208AQ9UK61 1670 aaKnown RBP13.52□□□□□ -0.25
APP-213ENST00000464867 N4BP2Q86UW6 1770 aaPredicted RBP13.52□□□□□ -0.25
APP-213ENST00000464867 C4BP0C0L5 1744 aa13.51□□□□□ -0.25
APP-213ENST00000464867 FAM161AQ3B820 660 aa13.51□□□□□ -0.25
APP-213ENST00000464867 SPNS2Q8IVW8 549 aa13.51□□□□□ -0.25
APP-213ENST00000464867 PXDNLA1KZ92 1463 aa13.5□□□□□ -0.25
APP-213ENST00000464867 PALLDQ8WX93 1383 aa13.5□□□□□ -0.25
APP-213ENST00000464867 MMP10P09238 476 aa13.5□□□□□ -0.25
APP-213ENST00000464867 SSFA2P28290 1259 aa13.5□□□□□ -0.25
APP-213ENST00000464867 NBPF1Q3BBV0 1214 aa13.5□□□□□ -0.25
APP-213ENST00000464867 SMARCC1Q92922 1105 aaPredicted RBP13.5□□□□□ -0.25
APP-213ENST00000464867 RNF181Q9P0P0 153 aa13.5□□□□□ -0.25
APP-213ENST00000464867 PKD1L3Q7Z443 1732 aa13.5□□□□□ -0.25
APP-213ENST00000464867 UBR3Q6ZT12 1888 aa13.49□□□□□ -0.25
APP-213ENST00000464867 KIF13BQ9NQT8 1826 aa13.49□□□□□ -0.25
APP-213ENST00000464867 PRDM10Q9NQV6 1147 aa13.49□□□□□ -0.25
APP-213ENST00000464867 USP31Q70CQ4 1352 aa13.48□□□□□ -0.25
APP-213ENST00000464867 MPRIPQ6WCQ1 1025 aa13.48□□□□□ -0.25
APP-213ENST00000464867 IP6K1Q92551 441 aa13.48□□□□□ -0.25
APP-213ENST00000464867 AIDAQ96BJ3 306 aa13.48□□□□□ -0.25
APP-213ENST00000464867 CCDC87Q9NVE4 849 aa13.47□□□□□ -0.25
APP-213ENST00000464867 ARFGEF1Q9Y6D6 1849 aa13.46□□□□□ -0.25
APP-213ENST00000464867 CGNL1Q0VF96 1302 aa13.46□□□□□ -0.25
APP-213ENST00000464867 VEGFAP15692 232 aaPredicted RBP13.46□□□□□ -0.25
APP-213ENST00000464867 DPEP1P16444 411 aa13.46□□□□□ -0.25
APP-213ENST00000464867 MLLT1Q03111 559 aaPredicted RBP13.46□□□□□ -0.25
APP-213ENST00000464867 SMIM5Q71RC9 77 aa13.46□□□□□ -0.25
APP-213ENST00000464867 NME9Q86XW9 330 aa13.46□□□□□ -0.25
APP-213ENST00000464867 PIM2Q9P1W9 311 aa13.46□□□□□ -0.25
APP-213ENST00000464867 GTPBP6O43824 516 aaPredicted RBP13.45□□□□□ -0.26
APP-213ENST00000464867 CTCFP49711 727 aaPredicted RBP13.45□□□□□ -0.26
APP-213ENST00000464867 AMIGO3Q86WK7 504 aa13.45□□□□□ -0.26
APP-213ENST00000464867 NLGN1Q8N2Q7 840 aa13.45□□□□□ -0.26
APP-213ENST00000464867 MON2Q7Z3U7 1717 aa13.44□□□□□ -0.26
APP-213ENST00000464867 TOGARAM1Q9Y4F4 1720 aa13.44□□□□□ -0.26
APP-213ENST00000464867 GNPATO15228 680 aa13.44□□□□□ -0.26
APP-213ENST00000464867 FOXN1O15353 648 aa13.44□□□□□ -0.26
APP-213ENST00000464867 DALRD3Q5D0E6 543 aaKnown RBP13.44□□□□□ -0.26
APP-213ENST00000464867 RAPGEF4Q8WZA2 1011 aa13.44□□□□□ -0.26
APP-213ENST00000464867 GPHNQ9NQX3 736 aaPredicted RBP13.44□□□□□ -0.26
APP-213ENST00000464867 PCDHGA4Q9Y5G9 962 aa13.44□□□□□ -0.26
APP-213ENST00000464867 KIAA1551Q9HCM1 1747 aa13.44□□□□□ -0.26
APP-213ENST00000464867 BRCA1P38398 1863 aaKnown RBP13.44□□□□□ -0.26
APP-213ENST00000464867 ZC3H4Q9UPT8 1303 aaKnown RBP13.43□□□□□ -0.26
APP-213ENST00000464867 NUDT7P0C024 238 aa13.43□□□□□ -0.26
APP-213ENST00000464867 TMF1P82094 1093 aa13.43□□□□□ -0.26
APP-213ENST00000464867 MMRN1Q13201 1228 aa13.43□□□□□ -0.26
APP-213ENST00000464867 RYDENQ9NUL5 291 aaKnown RBP13.43□□□□□ -0.26
APP-213ENST00000464867 MKRN1Q9UHC7 482 aaKnown RBP13.43□□□□□ -0.26
APP-213ENST00000464867 AMPHP49418 695 aa13.42□□□□□ -0.26
APP-213ENST00000464867 FOXK1P85037 733 aa13.42□□□□□ -0.26
APP-213ENST00000464867 ABHD8Q96I13 439 aa13.42□□□□□ -0.26
APP-213ENST00000464867 PARP3Q9Y6F1 533 aa13.42□□□□□ -0.26
APP-213ENST00000464867 SBF1O95248 1867 aa13.42□□□□□ -0.26
APP-213ENST00000464867 PCDH11XQ9BZA7 1347 aa13.41□□□□□ -0.26
APP-213ENST00000464867 PCDH11YQ9BZA8 1340 aa13.41□□□□□ -0.26
APP-213ENST00000464867 MEGF6O75095 1541 aa13.41□□□□□ -0.26
APP-213ENST00000464867 TATP17735 454 aaPredicted RBP13.41□□□□□ -0.26
APP-213ENST00000464867 DSG2Q14126 1118 aa13.41□□□□□ -0.26
APP-213ENST00000464867 TRAPPC3LQ5T215 181 aa13.41□□□□□ -0.26
APP-213ENST00000464867 HDGFL2Q7Z4V5 671 aaPredicted RBP13.41□□□□□ -0.26
APP-213ENST00000464867 DCAF5Q96JK2 942 aa13.41□□□□□ -0.26
APP-213ENST00000464867 ZNF316A6NFI3 1004 aaPredicted RBP13.4□□□□□ -0.26
APP-213ENST00000464867 PLPP6Q8IY26 295 aa13.4□□□□□ -0.26
APP-213ENST00000464867 RGPD2P0DJD1 1756 aa13.4□□□□□ -0.26
APP-213ENST00000464867 ITGB4P16144 1822 aa13.39□□□□□ -0.27
APP-213ENST00000464867 LOC102724428A0A0B4J2F2 783 aa13.39□□□□□ -0.27
APP-213ENST00000464867 GLTPD2A6NH11 291 aa13.39□□□□□ -0.27
APP-213ENST00000464867 SIK1P57059 783 aa13.39□□□□□ -0.27
APP-213ENST00000464867 ZNF687Q8N1G0 1237 aa13.39□□□□□ -0.27
APP-213ENST00000464867 LINC00116Q8NCU8 138 aa13.39□□□□□ -0.27
APP-213ENST00000464867 CCDC85CA6NKD9 419 aa13.38□□□□□ -0.27
APP-213ENST00000464867 TMC1Q8TDI8 760 aa13.38□□□□□ -0.27
APP-213ENST00000464867 RTCBQ9Y3I0 505 aaKnown RBP13.38□□□□□ -0.27
APP-213ENST00000464867 RAB3GAP2Q9H2M9 1393 aa13.37□□□□□ -0.27
APP-213ENST00000464867 SBNO2Q9Y2G9 1366 aa13.37□□□□□ -0.27
APP-213ENST00000464867 C4AP0C0L4 1744 aa13.37□□□□□ -0.27
APP-213ENST00000464867 KCNA3P22001 575 aa13.37□□□□□ -0.27
APP-213ENST00000464867 HOXC9P31274 260 aa13.37□□□□□ -0.27
APP-213ENST00000464867 ATP6V1AP38606 617 aa13.37□□□□□ -0.27
APP-213ENST00000464867 LBX1P52954 281 aa13.37□□□□□ -0.27
APP-213ENST00000464867 LMNB1P20700 586 aa13.36□□□□□ -0.27
APP-213ENST00000464867 RFC4P35249 363 aa13.36□□□□□ -0.27
APP-213ENST00000464867 PIGBQ92521 554 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms