RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 TTC21BQ7Z4L5 1316 aa8.77□□□□□ -1
USP48-206ENST00000464577 TTC14Q96N46 770 aa8.77□□□□□ -1
USP48-206ENST00000464577 GTPBP4Q9BZE4 634 aaKnown RBP8.77□□□□□ -1
USP48-206ENST00000464577 UPF3BQ9BZI7 483 aaKnown RBP8.77□□□□□ -1
USP48-206ENST00000464577 PEAK1Q9H792 1746 aa8.77□□□□□ -1
USP48-206ENST00000464577 DIAPH3Q9NSV4 1193 aa8.77□□□□□ -1
USP48-206ENST00000464577 CRYBG1Q9Y4K1 1723 aa8.77□□□□□ -1
USP48-206ENST00000464577 TRIM6-TRIM34B2RNG4 842 aa8.77□□□□□ -1.01
USP48-206ENST00000464577 HCLS1P14317 486 aaPredicted RBP8.77□□□□□ -1.01
USP48-206ENST00000464577 ZSCAN20P17040 1043 aaPredicted RBP8.77□□□□□ -1.01
USP48-206ENST00000464577 TSHZ3Q63HK5 1081 aa8.77□□□□□ -1.01
USP48-206ENST00000464577 SLC4A10Q6U841 1118 aa8.77□□□□□ -1.01
USP48-206ENST00000464577 NOL8Q76FK4 1167 aaKnown RBP8.77□□□□□ -1.01
USP48-206ENST00000464577 RILPL2Q969X0 211 aa8.77□□□□□ -1.01
USP48-206ENST00000464577 TTC12Q9H892 705 aaPredicted RBP8.77□□□□□ -1.01
USP48-206ENST00000464577 CNPY2Q9Y2B0 182 aa8.77□□□□□ -1.01
USP48-206ENST00000464577 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.77□□□□□ -1.01
USP48-206ENST00000464577 TOPAZ1Q8N9V7 1692 aa8.77□□□□□ -1.01
USP48-206ENST00000464577 F6X3S4 739 aa8.76□□□□□ -1.01
USP48-206ENST00000464577 STX6O43752 255 aa8.76□□□□□ -1.01
USP48-206ENST00000464577 F13A1P00488 732 aa8.76□□□□□ -1.01
USP48-206ENST00000464577 KIAA1524Q8TCG1 905 aa8.76□□□□□ -1.01
USP48-206ENST00000464577 ZNF830Q96NB3 372 aaPredicted RBP8.76□□□□□ -1.01
USP48-206ENST00000464577 USP31Q70CQ4 1352 aa8.76□□□□□ -1.01
USP48-206ENST00000464577 PNMA6EA0A0J9YXQ4 647 aa8.76□□□□□ -1.01
USP48-206ENST00000464577 GOLGA6L6A8MZA4 724 aa8.76□□□□□ -1.01
USP48-206ENST00000464577 STK31Q9BXU1 1019 aa8.76□□□□□ -1.01
USP48-206ENST00000464577 TSPYL4Q9UJ04 414 aa8.76□□□□□ -1.01
USP48-206ENST00000464577 STAG3Q9UJ98 1225 aa8.76□□□□□ -1.01
USP48-206ENST00000464577 LIMCH1Q9UPQ0 1083 aa8.76□□□□□ -1.01
USP48-206ENST00000464577 SGSM2O43147 1006 aa8.75□□□□□ -1.01
USP48-206ENST00000464577 RAB11FIP3O75154 756 aa8.75□□□□□ -1.01
USP48-206ENST00000464577 SYT1P21579 422 aa8.75□□□□□ -1.01
USP48-206ENST00000464577 CHAF1AQ13111 956 aaPredicted RBP8.75□□□□□ -1.01
USP48-206ENST00000464577 FBXO31Q5XUX0 539 aaPredicted RBP8.75□□□□□ -1.01
USP48-206ENST00000464577 UNC5CLQ8IV45 518 aa8.75□□□□□ -1.01
USP48-206ENST00000464577 ANKRD7Q92527 254 aa8.75□□□□□ -1.01
USP48-206ENST00000464577 BCL2L12Q9HB09 334 aa8.75□□□□□ -1.01
USP48-206ENST00000464577 SNX14Q9Y5W7 946 aa8.75□□□□□ -1.01
USP48-206ENST00000464577 AGLP35573 1532 aa8.75□□□□□ -1.01
USP48-206ENST00000464577 FMN2Q9NZ56 1722 aa8.75□□□□□ -1.01
USP48-206ENST00000464577 KDRP35968 1356 aa8.75□□□□□ -1.01
USP48-206ENST00000464577 CTIFO43310 598 aaKnown RBP8.74□□□□□ -1.01
USP48-206ENST00000464577 FLIIQ13045 1269 aa8.74□□□□□ -1.01
USP48-206ENST00000464577 C17orf53Q8N3J3 647 aaPredicted RBP8.74□□□□□ -1.01
USP48-206ENST00000464577 LSG1Q9H089 658 aaKnown RBP8.74□□□□□ -1.01
USP48-206ENST00000464577 PRDM10Q9NQV6 1147 aa8.74□□□□□ -1.01
USP48-206ENST00000464577 SMC3Q9UQE7 1217 aa8.74□□□□□ -1.01
USP48-206ENST00000464577 CACNA1FO60840 1977 aa8.74□□□□□ -1.01
USP48-206ENST00000464577 HAX1O00165 279 aa8.74□□□□□ -1.01
USP48-206ENST00000464577 HTATSF1O43719 755 aaKnown RBP8.74□□□□□ -1.01
USP48-206ENST00000464577 KIF20AO95235 890 aa8.74□□□□□ -1.01
USP48-206ENST00000464577 PDIA4P13667 645 aaKnown RBP8.74□□□□□ -1.01
USP48-206ENST00000464577 AK2P54819 239 aa8.74□□□□□ -1.01
USP48-206ENST00000464577 SYCP1Q15431 976 aa8.74□□□□□ -1.01
USP48-206ENST00000464577 FOXD4L6Q3SYB3 417 aaPredicted RBP8.74□□□□□ -1.01
USP48-206ENST00000464577 PPP4R3BQ5MIZ7 849 aa8.74□□□□□ -1.01
USP48-206ENST00000464577 CCDC30Q5VVM6 783 aa8.74□□□□□ -1.01
USP48-206ENST00000464577 FOXD4L3Q6VB84 417 aaPredicted RBP8.74□□□□□ -1.01
USP48-206ENST00000464577 RUFY3Q7L099 469 aa8.74□□□□□ -1.01
USP48-206ENST00000464577 SSH3Q8TE77 659 aa8.74□□□□□ -1.01
USP48-206ENST00000464577 RTF1Q92541 710 aaKnown RBP8.74□□□□□ -1.01
USP48-206ENST00000464577 ARID3AQ99856 593 aa8.74□□□□□ -1.01
USP48-206ENST00000464577 IL25Q9H293 177 aa8.74□□□□□ -1.01
USP48-206ENST00000464577 KCNF1Q9H3M0 494 aa8.74□□□□□ -1.01
USP48-206ENST00000464577 METP08581 1390 aa8.73□□□□□ -1.01
USP48-206ENST00000464577 POLA2Q14181 598 aa8.73□□□□□ -1.01
USP48-206ENST00000464577 PDCL2Q8N4E4 241 aa8.73□□□□□ -1.01
USP48-206ENST00000464577 PI4K2BQ8TCG2 481 aa8.73□□□□□ -1.01
USP48-206ENST00000464577 TSC1Q92574 1164 aa8.73□□□□□ -1.01
USP48-206ENST00000464577 JARID2Q92833 1246 aaPredicted RBP8.73□□□□□ -1.01
USP48-206ENST00000464577 ZSCAN31Q96LW9 406 aaPredicted RBP8.73□□□□□ -1.01
USP48-206ENST00000464577 SH2B1Q9NRF2 756 aaPredicted RBP8.73□□□□□ -1.01
USP48-206ENST00000464577 LRRFIP2Q9Y608 721 aaKnown RBP8.73□□□□□ -1.01
USP48-206ENST00000464577 TCHHQ07283 1943 aa8.73□□□□□ -1.01
USP48-206ENST00000464577 MAP3K5Q99683 1374 aa8.73□□□□□ -1.01
USP48-206ENST00000464577 CCDC171Q6TFL3 1326 aa8.73□□□□□ -1.01
USP48-206ENST00000464577 PRR36Q9H6K5 1346 aa8.73□□□□□ -1.01
USP48-206ENST00000464577 USP42Q9H9J4 1324 aaKnown RBP8.73□□□□□ -1.01
USP48-206ENST00000464577 FIBPO43427 364 aa8.73□□□□□ -1.01
USP48-206ENST00000464577 CCDC192P0DO97 292 aa8.73□□□□□ -1.01
USP48-206ENST00000464577 ATP2B3Q16720 1220 aa8.73□□□□□ -1.01
USP48-206ENST00000464577 CNTROBQ8N137 903 aa8.73□□□□□ -1.01
USP48-206ENST00000464577 MPNDQ8N594 471 aa8.73□□□□□ -1.01
USP48-206ENST00000464577 PYCARDQ9ULZ3 195 aa8.73□□□□□ -1.01
USP48-206ENST00000464577 MTMR6Q9Y217 621 aa8.73□□□□□ -1.01
USP48-206ENST00000464577 CHD2O14647 1828 aaKnown RBP8.72□□□□□ -1.01
USP48-206ENST00000464577 MAP3K19Q56UN5 1328 aa8.72□□□□□ -1.01
USP48-206ENST00000464577 USP6P35125 1406 aa8.72□□□□□ -1.01
USP48-206ENST00000464577 RIOK3O14730 519 aaKnown RBP8.72□□□□□ -1.01
USP48-206ENST00000464577 AP5Z1O43299 807 aa8.72□□□□□ -1.01
USP48-206ENST00000464577 MTHFSDQ2M296 383 aaKnown RBP8.72□□□□□ -1.01
USP48-206ENST00000464577 VPS53Q5VIR6 699 aa8.72□□□□□ -1.01
USP48-206ENST00000464577 GIMAP6Q6P9H5 292 aa8.72□□□□□ -1.01
USP48-206ENST00000464577 FAM200AQ8TCP9 573 aa8.72□□□□□ -1.01
USP48-206ENST00000464577 KCNB2Q92953 911 aa8.72□□□□□ -1.01
USP48-206ENST00000464577 FEZ1Q99689 392 aa8.72□□□□□ -1.01
USP48-206ENST00000464577 TM6SF1Q9BZW5 370 aa8.72□□□□□ -1.01
USP48-206ENST00000464577 BABAM1Q9NWV8 329 aa8.72□□□□□ -1.01
USP48-206ENST00000464577 ELP1O95163 1332 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms