RNA–Protein interactions for RNA: ENST00000463948.1

EGFR-209, Transcript of epidermal growth factor receptor, humanhuman

TSL 3

Gene EGFR, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-209ENST00000463948 IL17REQ8NFR9 667 aa25.33■■□□□ 1.65
EGFR-209ENST00000463948 NMRK2Q9NPI5 230 aa25.33■■□□□ 1.65
EGFR-209ENST00000463948 VSIG10Q8N0Z9 540 aa25.31■■□□□ 1.64
EGFR-209ENST00000463948 BCL2L12Q9HB09 334 aa25.31■■□□□ 1.64
EGFR-209ENST00000463948 KCPQ6ZWJ8 1503 aa25.31■■□□□ 1.64
EGFR-209ENST00000463948 COL15A1P39059 1388 aa25.31■■□□□ 1.64
EGFR-209ENST00000463948 MRC1P22897 1456 aa25.3■■□□□ 1.64
EGFR-209ENST00000463948 GNAT3A8MTJ3 354 aa25.3■■□□□ 1.64
EGFR-209ENST00000463948 STARD3NLO95772 234 aa25.3■■□□□ 1.64
EGFR-209ENST00000463948 TEFQ10587 303 aa25.3■■□□□ 1.64
EGFR-209ENST00000463948 BICDL1Q6ZP65 573 aa25.3■■□□□ 1.64
EGFR-209ENST00000463948 SERPINB2P05120 415 aa25.29■■□□□ 1.64
EGFR-209ENST00000463948 ZNF496Q96IT1 587 aaPredicted RBP25.29■■□□□ 1.64
EGFR-209ENST00000463948 ADAMTS7Q9UKP4 1686 aa25.29■■□□□ 1.64
EGFR-209ENST00000463948 VIRMAQ69YN4 1812 aaKnown RBP25.28■■□□□ 1.64
EGFR-209ENST00000463948 GAS2L2Q8NHY3 880 aa25.28■■□□□ 1.64
EGFR-209ENST00000463948 RNF181Q9P0P0 153 aa25.28■■□□□ 1.64
EGFR-209ENST00000463948 BRCA1P38398 1863 aaKnown RBP25.28■■□□□ 1.64
EGFR-209ENST00000463948 PHACTR3Q96KR7 559 aa25.27■■□□□ 1.64
EGFR-209ENST00000463948 ZNF330Q9Y3S2 320 aaPredicted RBP25.27■■□□□ 1.64
EGFR-209ENST00000463948 NPC1L1Q9UHC9 1359 aa25.27■■□□□ 1.64
EGFR-209ENST00000463948 TOMM70O94826 608 aa25.26■■□□□ 1.63
EGFR-209ENST00000463948 ZNF790Q6PG37 636 aa25.26■■□□□ 1.63
EGFR-209ENST00000463948 COL3A1P02461 1466 aaPredicted RBP25.26■■□□□ 1.63
EGFR-209ENST00000463948 EIF5P55010 431 aaKnown RBP25.25■■□□□ 1.63
EGFR-209ENST00000463948 TBC1D2BQ9UPU7 963 aa25.24■■□□□ 1.63
EGFR-209ENST00000463948 KCNQ3O43525 872 aa25.23■■□□□ 1.63
EGFR-209ENST00000463948 PRKAR2BP31323 418 aa25.23■■□□□ 1.63
EGFR-209ENST00000463948 C2CD5Q86YS7 1000 aa25.23■■□□□ 1.63
EGFR-209ENST00000463948 ARFGEF1Q9Y6D6 1849 aa25.22■■□□□ 1.63
EGFR-209ENST00000463948 A0A087WZG4 1122 aa25.22■■□□□ 1.63
EGFR-209ENST00000463948 A1BGP04217 495 aa25.22■■□□□ 1.63
EGFR-209ENST00000463948 CFAP53Q96M91 514 aa25.22■■□□□ 1.63
EGFR-209ENST00000463948 HEG1Q9ULI3 1381 aa25.21■■□□□ 1.63
EGFR-209ENST00000463948 RASSF7Q02833 373 aa25.21■■□□□ 1.63
EGFR-209ENST00000463948 TBC1D9BQ66K14 1250 aa25.21■■□□□ 1.63
EGFR-209ENST00000463948 C16orf71Q8IYS4 520 aaPredicted RBP25.21■■□□□ 1.63
EGFR-209ENST00000463948 CCDC24Q8N4L8 307 aa25.21■■□□□ 1.63
EGFR-209ENST00000463948 TEX13AQ9BXU3 409 aaPredicted RBP25.21■■□□□ 1.63
EGFR-209ENST00000463948 RRAGCQ9HB90 399 aa25.21■■□□□ 1.63
EGFR-209ENST00000463948 H0YIN7 160 aa25.2■■□□□ 1.62
EGFR-209ENST00000463948 TTLL6Q8N841 843 aa25.2■■□□□ 1.62
EGFR-209ENST00000463948 FMNL2Q96PY5 1086 aa25.2■■□□□ 1.62
EGFR-209ENST00000463948 RSPH6AQ9H0K4 717 aa25.2■■□□□ 1.62
EGFR-209ENST00000463948 AFDNP55196 1824 aaKnown RBP25.2■■□□□ 1.62
EGFR-209ENST00000463948 BTBD11A6QL63 1104 aa25.19■■□□□ 1.62
EGFR-209ENST00000463948 KDM2BQ8NHM5 1336 aa25.18■■□□□ 1.62
EGFR-209ENST00000463948 U2AF1L5P0DN76 240 aaPredicted RBP25.18■■□□□ 1.62
EGFR-209ENST00000463948 APLP1P51693 650 aa25.18■■□□□ 1.62
EGFR-209ENST00000463948 U2AF1Q01081 240 aaKnown RBP eCLIP25.18■■□□□ 1.62
EGFR-209ENST00000463948 NUDCQ9Y266 331 aa25.18■■□□□ 1.62
EGFR-209ENST00000463948 CARMIL3Q8ND23 1372 aa25.18■■□□□ 1.62
EGFR-209ENST00000463948 UBR2Q8IWV8 1755 aa25.16■■□□□ 1.62
EGFR-209ENST00000463948 PPP2R1AP30153 589 aa25.16■■□□□ 1.62
EGFR-209ENST00000463948 PIP4K2AP48426 406 aaPredicted RBP25.16■■□□□ 1.62
EGFR-209ENST00000463948 NPM2Q86SE8 214 aaKnown RBP25.16■■□□□ 1.62
EGFR-209ENST00000463948 ZNF622Q969S3 477 aaKnown RBP eCLIP25.16■■□□□ 1.62
EGFR-209ENST00000463948 ZNF219Q9P2Y4 722 aaPredicted RBP25.16■■□□□ 1.62
EGFR-209ENST00000463948 IL6STP40189 918 aaPredicted RBP25.15■■□□□ 1.62
EGFR-209ENST00000463948 PRELPP51888 382 aa25.15■■□□□ 1.62
EGFR-209ENST00000463948 RBM46Q8TBY0 533 aaKnown RBP25.15■■□□□ 1.62
EGFR-209ENST00000463948 MCM10Q7L590 875 aa25.14■■□□□ 1.62
EGFR-209ENST00000463948 USP16Q9Y5T5 823 aa25.14■■□□□ 1.62
EGFR-209ENST00000463948 PRAMEF22A3QJZ6 481 aa25.13■■□□□ 1.61
EGFR-209ENST00000463948 LMNB1P20700 586 aa25.13■■□□□ 1.61
EGFR-209ENST00000463948 CEMIPQ8WUJ3 1361 aa25.13■■□□□ 1.61
EGFR-209ENST00000463948 SBF1O95248 1867 aa25.13■■□□□ 1.61
EGFR-209ENST00000463948 HTRA3P83110 453 aa25.12■■□□□ 1.61
EGFR-209ENST00000463948 DCTN1Q14203 1278 aa25.12■■□□□ 1.61
EGFR-209ENST00000463948 PRR5LQ6MZQ0 368 aa25.12■■□□□ 1.61
EGFR-209ENST00000463948 DNAJC5GQ8N7S2 189 aa25.12■■□□□ 1.61
EGFR-209ENST00000463948 RTF1Q92541 710 aaKnown RBP25.12■■□□□ 1.61
EGFR-209ENST00000463948 SETDB2Q96T68 719 aa25.12■■□□□ 1.61
EGFR-209ENST00000463948 NRXN2Q9P2S2 1712 aa25.12■■□□□ 1.61
EGFR-209ENST00000463948 NPHP1O15259 732 aa25.11■■□□□ 1.61
EGFR-209ENST00000463948 CAMTA2O94983 1202 aa25.11■■□□□ 1.61
EGFR-209ENST00000463948 IFFO2Q5TF58 517 aa25.11■■□□□ 1.61
EGFR-209ENST00000463948 BRIP1Q9BX63 1249 aa25.11■■□□□ 1.61
EGFR-209ENST00000463948 PDE6BP35913 854 aa25.1■■□□□ 1.61
EGFR-209ENST00000463948 DZIP3Q86Y13 1208 aaKnown RBP25.1■■□□□ 1.61
EGFR-209ENST00000463948 SIPA1L3O60292 1781 aaPredicted RBP25.09■■□□□ 1.61
EGFR-209ENST00000463948 C21orf2O43822 256 aa25.09■■□□□ 1.61
EGFR-209ENST00000463948 NFKBIEO00221 500 aa25.08■■□□□ 1.61
EGFR-209ENST00000463948 FSTL1Q12841 308 aa25.07■■□□□ 1.6
EGFR-209ENST00000463948 CNBD1Q8NA66 436 aa25.07■■□□□ 1.6
EGFR-209ENST00000463948 GLTPD2A6NH11 291 aa25.06■■□□□ 1.6
EGFR-209ENST00000463948 SNRPA1P09661 255 aaKnown RBP25.06■■□□□ 1.6
EGFR-209ENST00000463948 MIS18AQ9NYP9 233 aa25.06■■□□□ 1.6
EGFR-209ENST00000463948 PDZRN3Q9UPQ7 1066 aa25.04■■□□□ 1.6
EGFR-209ENST00000463948 VEGFAP15692 232 aaPredicted RBP25.03■■□□□ 1.6
EGFR-209ENST00000463948 ST5P78524 1137 aa25.03■■□□□ 1.6
EGFR-209ENST00000463948 ZC3H4Q9UPT8 1303 aaKnown RBP25.02■■□□□ 1.6
EGFR-209ENST00000463948 DLEC1Q9Y238 1755 aa25.02■■□□□ 1.6
EGFR-209ENST00000463948 CCDC88AQ3V6T2 1871 aa25.02■■□□□ 1.6
EGFR-209ENST00000463948 ANKRD31Q8N7Z5 1873 aa25.02■■□□□ 1.6
EGFR-209ENST00000463948 NBPF26B4DH59 902 aa25.01■■□□□ 1.59
EGFR-209ENST00000463948 TAF7Q15545 349 aaPredicted RBP25.01■■□□□ 1.59
EGFR-209ENST00000463948 NBPF10Q6P3W6 841 aaKnown RBP25.01■■□□□ 1.59
EGFR-209ENST00000463948 NBPF5PQ86XG9 351 aaPredicted RBP25.01■■□□□ 1.59
EGFR-209ENST00000463948 NBPF15Q8N660 670 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms