RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 SETDB2Q96T68 719 aa15.09■□□□□ 0.01
NUP58-206ENST00000463407 TRAPPC8Q9Y2L5 1435 aa15.09■□□□□ 0.01
NUP58-206ENST00000463407 TNIP1Q15025 636 aa15.08■□□□□ 0.01
NUP58-206ENST00000463407 SMARCE1Q969G3 411 aa15.08■□□□□ 0.01
NUP58-206ENST00000463407 PTPRCP08575 1304 aa15.08■□□□□ 0.01
NUP58-206ENST00000463407 JARID2Q92833 1246 aaPredicted RBP15.08■□□□□ 0
NUP58-206ENST00000463407 SMARCC1Q92922 1105 aaPredicted RBP15.08■□□□□ 0
NUP58-206ENST00000463407 MRE11P49959 708 aa15.08■□□□□ 0
NUP58-206ENST00000463407 MYCNP04198 464 aaPredicted RBP15.07■□□□□ 0
NUP58-206ENST00000463407 CCDC173Q0VFZ6 552 aa15.07■□□□□ 0
NUP58-206ENST00000463407 ZMYM3Q14202 1370 aa15.07■□□□□ 0
NUP58-206ENST00000463407 CAGE1Q8TC20 777 aa15.07■□□□□ 0
NUP58-206ENST00000463407 CCDC152Q4G0S7 254 aa15.07■□□□□ 0
NUP58-206ENST00000463407 LRRC59Q96AG4 307 aaKnown RBP15.07■□□□□ 0
NUP58-206ENST00000463407 PRPF40BQ6NWY9 871 aaKnown RBP15.07■□□□□ 0
NUP58-206ENST00000463407 UBE3BQ7Z3V4 1068 aa15.07■□□□□ 0
NUP58-206ENST00000463407 IL2RBP14784 551 aa15.06■□□□□ 0
NUP58-206ENST00000463407 MBIPQ9NS73 344 aa15.06■□□□□ 0
NUP58-206ENST00000463407 DACH1Q9UI36 760 aa15.06■□□□□ 0
NUP58-206ENST00000463407 MNS1Q8NEH6 495 aa15.06■□□□□ 0
NUP58-206ENST00000463407 DDX11Q96FC9 970 aa15.06■□□□□ 0
NUP58-206ENST00000463407 KIF21AQ7Z4S6 1674 aa15.06■□□□□ 0
NUP58-206ENST00000463407 ABCC10Q5T3U5 1492 aa15.06■□□□□ 0
NUP58-206ENST00000463407 KRT85P78386 507 aa15.06■□□□□ 0
NUP58-206ENST00000463407 SLC39A6Q13433 755 aa15.06■□□□□ 0
NUP58-206ENST00000463407 C20orf194Q5TEA3 1177 aa15.06■□□□□ 0
NUP58-206ENST00000463407 PI4KAP2A4QPH2 592 aa15.05■□□□□ 0
NUP58-206ENST00000463407 MYO1BO43795 1136 aa15.05■□□□□ 0
NUP58-206ENST00000463407 TNNT3P45378 269 aaPredicted RBP15.05■□□□□ 0
NUP58-206ENST00000463407 ANKRD13DQ6ZTN6 518 aa15.05■□□□□ 0
NUP58-206ENST00000463407 PI4KAP1Q8N8J0 262 aa15.05■□□□□ 0
NUP58-206ENST00000463407 SCLT1Q96NL6 688 aa15.05■□□□□ 0
NUP58-206ENST00000463407 PIK3R4Q99570 1358 aa15.05■□□□□ 0
NUP58-206ENST00000463407 ZNF213O14771 459 aa15.05■□□□□ -0
NUP58-206ENST00000463407 ANXA1P04083 346 aa15.05■□□□□ -0
NUP58-206ENST00000463407 CUL5Q93034 780 aa15.05■□□□□ -0
NUP58-206ENST00000463407 TNMDQ9H2S6 317 aa15.05■□□□□ -0
NUP58-206ENST00000463407 RDXP35241 583 aaKnown RBP15.05■□□□□ -0
NUP58-206ENST00000463407 LDHCP07864 332 aa15.05■□□□□ -0
NUP58-206ENST00000463407 IQCA1Q86XH1 822 aa15.05■□□□□ -0
NUP58-206ENST00000463407 SERPINC1P01008 464 aa15.04■□□□□ -0
NUP58-206ENST00000463407 TTF1Q15361 905 aaPredicted RBP15.04■□□□□ -0
NUP58-206ENST00000463407 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.04■□□□□ -0
NUP58-206ENST00000463407 RSPH6AQ9H0K4 717 aa15.04■□□□□ -0
NUP58-206ENST00000463407 TFCP2L1Q9NZI6 479 aa15.04■□□□□ -0
NUP58-206ENST00000463407 SLC4A8Q2Y0W8 1093 aa15.04■□□□□ -0
NUP58-206ENST00000463407 NBPF14Q5TI25 921 aa15.04■□□□□ -0
NUP58-206ENST00000463407 RUFY1Q96T51 708 aa15.04■□□□□ -0
NUP58-206ENST00000463407 FEZ1Q99689 392 aa15.04■□□□□ -0
NUP58-206ENST00000463407 SPTY2D1Q68D10 685 aaPredicted RBP15.04■□□□□ -0
NUP58-206ENST00000463407 CEP57L1Q8IYX8 460 aa15.04■□□□□ -0
NUP58-206ENST00000463407 CTCFLQ8NI51 663 aaPredicted RBP15.04■□□□□ -0
NUP58-206ENST00000463407 BAG3O95817 575 aa15.03■□□□□ -0
NUP58-206ENST00000463407 SPATA32Q96LK8 384 aa15.03■□□□□ -0
NUP58-206ENST00000463407 POLD1P28340 1107 aa15.03■□□□□ -0
NUP58-206ENST00000463407 AKAP4Q5JQC9 854 aa15.03■□□□□ -0
NUP58-206ENST00000463407 CEP131Q9UPN4 1083 aa15.03■□□□□ -0
NUP58-206ENST00000463407 ZNHIT6Q9NWK9 470 aaKnown RBP15.03■□□□□ -0
NUP58-206ENST00000463407 ANKRD18AQ8IVF6 992 aa15.03■□□□□ -0
NUP58-206ENST00000463407 RNF41Q9H4P4 317 aaPredicted RBP15.03■□□□□ -0
NUP58-206ENST00000463407 GOLIM4O00461 696 aa15.03■□□□□ -0
NUP58-206ENST00000463407 CHPF2Q9P2E5 772 aa15.03■□□□□ -0
NUP58-206ENST00000463407 EIF4G3O43432 1585 aaKnown RBP15.02■□□□□ -0
NUP58-206ENST00000463407 CABP5Q9NP86 173 aa15.02■□□□□ -0
NUP58-206ENST00000463407 SNRKQ9NRH2 765 aa15.02■□□□□ -0
NUP58-206ENST00000463407 CFAP45Q9UL16 551 aa15.02■□□□□ -0
NUP58-206ENST00000463407 SLC12A7Q9Y666 1083 aa15.02■□□□□ -0
NUP58-206ENST00000463407 PTPRKQ15262 1439 aa15.02■□□□□ -0
NUP58-206ENST00000463407 ZRANB1Q9UGI0 708 aa15.02■□□□□ -0
NUP58-206ENST00000463407 NIP7Q9Y221 180 aaKnown RBP eCLIP15.02■□□□□ -0
NUP58-206ENST00000463407 PARP3Q9Y6F1 533 aa15.02■□□□□ -0
NUP58-206ENST00000463407 HLA-DOAP06340 250 aa15.02□□□□□ -0.01
NUP58-206ENST00000463407 CCDC192P0DO97 292 aa15.02□□□□□ -0.01
NUP58-206ENST00000463407 FAM43AQ8N2R8 423 aa15.02□□□□□ -0.01
NUP58-206ENST00000463407 UHRF1BP1Q6BDS2 1440 aa15.02□□□□□ -0.01
NUP58-206ENST00000463407 TRIM27P14373 513 aa15.02□□□□□ -0.01
NUP58-206ENST00000463407 WWC3Q9ULE0 1092 aa15.02□□□□□ -0.01
NUP58-206ENST00000463407 CLEC11AQ9Y240 323 aa15.02□□□□□ -0.01
NUP58-206ENST00000463407 XAGE3Q8WTP9 111 aa15.01□□□□□ -0.01
NUP58-206ENST00000463407 SIRT1Q96EB6 747 aa15.01□□□□□ -0.01
NUP58-206ENST00000463407 CCDC196A0A1B0GTZ2 297 aa15.01□□□□□ -0.01
NUP58-206ENST00000463407 HSP90AA2PQ14568 343 aaPredicted RBP15.01□□□□□ -0.01
NUP58-206ENST00000463407 KCNA6P17658 529 aa15.01□□□□□ -0.01
NUP58-206ENST00000463407 CCDC82Q8N4S0 544 aa15.01□□□□□ -0.01
NUP58-206ENST00000463407 RALGAPBQ86X10 1494 aa15.01□□□□□ -0.01
NUP58-206ENST00000463407 PPP4R3AQ6IN85 833 aa15.01□□□□□ -0.01
NUP58-206ENST00000463407 NLRP3Q96P20 1036 aa15.01□□□□□ -0.01
NUP58-206ENST00000463407 RTCBQ9Y3I0 505 aaKnown RBP15.01□□□□□ -0.01
NUP58-206ENST00000463407 WDR62O43379 1518 aa15.01□□□□□ -0.01
NUP58-206ENST00000463407 BTG4Q9NY30 223 aa15.01□□□□□ -0.01
NUP58-206ENST00000463407 ASXL1Q8IXJ9 1541 aa15□□□□□ -0.01
NUP58-206ENST00000463407 IFIT3O14879 490 aaKnown RBP15□□□□□ -0.01
NUP58-206ENST00000463407 GSTO1P78417 241 aa15□□□□□ -0.01
NUP58-206ENST00000463407 DEF6Q9H4E7 631 aa15□□□□□ -0.01
NUP58-206ENST00000463407 EHMT1Q9H9B1 1298 aa15□□□□□ -0.01
NUP58-206ENST00000463407 COPS6Q7L5N1 327 aa15□□□□□ -0.01
NUP58-206ENST00000463407 UTP14AQ9BVJ6 771 aaKnown RBP15□□□□□ -0.01
NUP58-206ENST00000463407 SEPT11Q9NVA2 429 aaKnown RBP15□□□□□ -0.01
NUP58-206ENST00000463407 HDAC9Q9UKV0 1011 aa15□□□□□ -0.01
NUP58-206ENST00000463407 CCDC83Q8IWF9 413 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms