RNA–Protein interactions for RNA: ENST00000462983.5

TRAPPC12-214, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-214ENST00000462983 RC3H1Q5TC82 1133 aaKnown RBP12□□□□□ -0.49
TRAPPC12-214ENST00000462983 SLC16A10Q8TF71 515 aa12□□□□□ -0.49
TRAPPC12-214ENST00000462983 FMNL2Q96PY5 1086 aa12□□□□□ -0.49
TRAPPC12-214ENST00000462983 RPS6KA4O75676 772 aa11.99□□□□□ -0.49
TRAPPC12-214ENST00000462983 TRAPPC3LQ5T215 181 aa11.99□□□□□ -0.49
TRAPPC12-214ENST00000462983 INTS5Q6P9B9 1019 aaKnown RBP11.99□□□□□ -0.49
TRAPPC12-214ENST00000462983 VSIG10Q8N0Z9 540 aa11.99□□□□□ -0.49
TRAPPC12-214ENST00000462983 CCDC87Q9NVE4 849 aa11.99□□□□□ -0.49
TRAPPC12-214ENST00000462983 TRIM35Q9UPQ4 493 aa11.99□□□□□ -0.49
TRAPPC12-214ENST00000462983 ZBED9Q6R2W3 1325 aa11.98□□□□□ -0.49
TRAPPC12-214ENST00000462983 PRAMEF22A3QJZ6 481 aa11.98□□□□□ -0.49
TRAPPC12-214ENST00000462983 ARHGEF1Q92888 912 aaKnown RBP11.98□□□□□ -0.49
TRAPPC12-214ENST00000462983 SGIP1Q9BQI5 828 aa11.98□□□□□ -0.49
TRAPPC12-214ENST00000462983 STARD3NLO95772 234 aa11.97□□□□□ -0.49
TRAPPC12-214ENST00000462983 CANXP27824 592 aaKnown RBP11.97□□□□□ -0.49
TRAPPC12-214ENST00000462983 POLD1P28340 1107 aa11.97□□□□□ -0.49
TRAPPC12-214ENST00000462983 RFC4P35249 363 aa11.97□□□□□ -0.49
TRAPPC12-214ENST00000462983 ZBTB1Q9Y2K1 713 aa11.97□□□□□ -0.49
TRAPPC12-214ENST00000462983 LAS1LQ9Y4W2 734 aaKnown RBP11.97□□□□□ -0.49
TRAPPC12-214ENST00000462983 SNRPA1P09661 255 aaKnown RBP11.96□□□□□ -0.49
TRAPPC12-214ENST00000462983 ADRA2BP18089 450 aa11.96□□□□□ -0.49
TRAPPC12-214ENST00000462983 HNRNPUQ00839 825 aaKnown RBP eCLIP11.96□□□□□ -0.49
TRAPPC12-214ENST00000462983 KLHL34Q8N239 644 aa11.96□□□□□ -0.49
TRAPPC12-214ENST00000462983 ARXQ96QS3 562 aa11.96□□□□□ -0.49
TRAPPC12-214ENST00000462983 TEX13AQ9BXU3 409 aaPredicted RBP11.96□□□□□ -0.49
TRAPPC12-214ENST00000462983 TSPYL4Q9UJ04 414 aa11.96□□□□□ -0.49
TRAPPC12-214ENST00000462983 ZNF330Q9Y3S2 320 aaPredicted RBP11.96□□□□□ -0.49
TRAPPC12-214ENST00000462983 USP16Q9Y5T5 823 aa11.96□□□□□ -0.49
TRAPPC12-214ENST00000462983 SOS1Q07889 1333 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC12-214ENST00000462983 A1BGP04217 495 aa11.95□□□□□ -0.5
TRAPPC12-214ENST00000462983 PIP4K2AP48426 406 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC12-214ENST00000462983 EIF4A1P60842 406 aaKnown RBP11.95□□□□□ -0.5
TRAPPC12-214ENST00000462983 WWC1Q8IX03 1113 aa11.95□□□□□ -0.5
TRAPPC12-214ENST00000462983 SRP68Q9UHB9 627 aaKnown RBP11.95□□□□□ -0.5
TRAPPC12-214ENST00000462983 COL15A1P39059 1388 aa11.94□□□□□ -0.5
TRAPPC12-214ENST00000462983 CALD1Q05682 793 aaKnown RBP11.94□□□□□ -0.5
TRAPPC12-214ENST00000462983 FHDC1Q9C0D6 1143 aaPredicted RBP11.94□□□□□ -0.5
TRAPPC12-214ENST00000462983 AFDNP55196 1824 aaKnown RBP11.94□□□□□ -0.5
TRAPPC12-214ENST00000462983 BCORQ6W2J9 1755 aa11.93□□□□□ -0.5
TRAPPC12-214ENST00000462983 ZPR1O75312 459 aa11.93□□□□□ -0.5
TRAPPC12-214ENST00000462983 GYS1P13807 737 aa11.93□□□□□ -0.5
TRAPPC12-214ENST00000462983 SALL2Q9Y467 1007 aaPredicted RBP11.93□□□□□ -0.5
TRAPPC12-214ENST00000462983 IL16Q14005 1332 aa11.92□□□□□ -0.5
TRAPPC12-214ENST00000462983 USP42Q9H9J4 1324 aaKnown RBP11.92□□□□□ -0.5
TRAPPC12-214ENST00000462983 SCN7AQ01118 1682 aa11.92□□□□□ -0.5
TRAPPC12-214ENST00000462983 CHL1O00533 1208 aa11.92□□□□□ -0.5
TRAPPC12-214ENST00000462983 GIGYF1O75420 1035 aaPredicted RBP11.92□□□□□ -0.5
TRAPPC12-214ENST00000462983 EIF5P55010 431 aaKnown RBP11.92□□□□□ -0.5
TRAPPC12-214ENST00000462983 USPL1Q5W0Q7 1092 aa11.92□□□□□ -0.5
TRAPPC12-214ENST00000462983 WDR63Q8IWG1 891 aa11.92□□□□□ -0.5
TRAPPC12-214ENST00000462983 NUP98P52948 1817 aa11.92□□□□□ -0.5
TRAPPC12-214ENST00000462983 MMP10P09238 476 aa11.91□□□□□ -0.5
TRAPPC12-214ENST00000462983 ZNF853P0CG23 659 aa11.91□□□□□ -0.5
TRAPPC12-214ENST00000462983 FKBP8Q14318 412 aa11.91□□□□□ -0.5
TRAPPC12-214ENST00000462983 KRT24Q2M2I5 525 aa11.91□□□□□ -0.5
TRAPPC12-214ENST00000462983 NPM2Q86SE8 214 aaKnown RBP11.91□□□□□ -0.5
TRAPPC12-214ENST00000462983 TRMT2AQ8IZ69 625 aaKnown RBP11.91□□□□□ -0.5
TRAPPC12-214ENST00000462983 NLGN1Q8N2Q7 840 aa11.91□□□□□ -0.5
TRAPPC12-214ENST00000462983 SYT17Q9BSW7 474 aa11.91□□□□□ -0.5
TRAPPC12-214ENST00000462983 BABAM1Q9NWV8 329 aa11.91□□□□□ -0.5
TRAPPC12-214ENST00000462983 TBC1D2BQ9UPU7 963 aa11.91□□□□□ -0.5
TRAPPC12-214ENST00000462983 KIF13BQ9NQT8 1826 aa11.9□□□□□ -0.5
TRAPPC12-214ENST00000462983 N4BP2Q86UW6 1770 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC12-214ENST00000462983 NBPF26B4DH59 902 aa11.9□□□□□ -0.5
TRAPPC12-214ENST00000462983 EIF2S2P20042 333 aaKnown RBP11.9□□□□□ -0.5
TRAPPC12-214ENST00000462983 IL6STP40189 918 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC12-214ENST00000462983 NBPF10Q6P3W6 841 aaKnown RBP11.9□□□□□ -0.5
TRAPPC12-214ENST00000462983 NBPF15Q8N660 670 aa11.9□□□□□ -0.5
TRAPPC12-214ENST00000462983 CFAP44Q96MT7 982 aa11.9□□□□□ -0.5
TRAPPC12-214ENST00000462983 SPINK5Q9NQ38 1064 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC12-214ENST00000462983 MBIPQ9NS73 344 aa11.9□□□□□ -0.5
TRAPPC12-214ENST00000462983 NARFQ9UHQ1 456 aa11.9□□□□□ -0.5
TRAPPC12-214ENST00000462983 A0A087WZG4 1122 aa11.89□□□□□ -0.51
TRAPPC12-214ENST00000462983 NECTIN2Q92692 538 aa11.89□□□□□ -0.51
TRAPPC12-214ENST00000462983 YTHDC1Q96MU7 727 aaKnown RBP11.89□□□□□ -0.51
TRAPPC12-214ENST00000462983 MYL6BP14649 208 aa11.88□□□□□ -0.51
TRAPPC12-214ENST00000462983 GNAI1P63096 354 aa11.88□□□□□ -0.51
TRAPPC12-214ENST00000462983 GOLGA2Q08379 1002 aa11.88□□□□□ -0.51
TRAPPC12-214ENST00000462983 SLFN5Q08AF3 891 aa11.88□□□□□ -0.51
TRAPPC12-214ENST00000462983 BICDL1Q6ZP65 573 aa11.88□□□□□ -0.51
TRAPPC12-214ENST00000462983 DZIP3Q86Y13 1208 aaKnown RBP11.88□□□□□ -0.51
TRAPPC12-214ENST00000462983 NLGN2Q8NFZ4 835 aa11.88□□□□□ -0.51
TRAPPC12-214ENST00000462983 BCL2L12Q9HB09 334 aa11.88□□□□□ -0.51
TRAPPC12-214ENST00000462983 IFT57Q9NWB7 429 aa11.88□□□□□ -0.51
TRAPPC12-214ENST00000462983 PARP3Q9Y6F1 533 aa11.88□□□□□ -0.51
TRAPPC12-214ENST00000462983 DDR1Q08345 913 aa11.87□□□□□ -0.51
TRAPPC12-214ENST00000462983 DUSP27Q5VZP5 1158 aa11.87□□□□□ -0.51
TRAPPC12-214ENST00000462983 CDCA7LQ96GN5 454 aa11.87□□□□□ -0.51
TRAPPC12-214ENST00000462983 E9PSI1 815 aa11.86□□□□□ -0.51
TRAPPC12-214ENST00000462983 ELL2O00472 640 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC12-214ENST00000462983 CAMTA2O94983 1202 aa11.86□□□□□ -0.51
TRAPPC12-214ENST00000462983 ANXA1P04083 346 aa11.86□□□□□ -0.51
TRAPPC12-214ENST00000462983 NFIXQ14938 502 aa11.86□□□□□ -0.51
TRAPPC12-214ENST00000462983 TSR2Q969E8 191 aaKnown RBP11.86□□□□□ -0.51
TRAPPC12-214ENST00000462983 CACNA1FO60840 1977 aa11.86□□□□□ -0.51
TRAPPC12-214ENST00000462983 CHD4Q14839 1912 aa11.86□□□□□ -0.51
TRAPPC12-214ENST00000462983 KIAA1551Q9HCM1 1747 aa11.86□□□□□ -0.51
TRAPPC12-214ENST00000462983 NRXN2Q9P2S2 1712 aa11.86□□□□□ -0.51
TRAPPC12-214ENST00000462983 BRCA1P38398 1863 aaKnown RBP11.85□□□□□ -0.51
TRAPPC12-214ENST00000462983 POLRMTO00411 1230 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms