RNA–Protein interactions for RNA: ENST00000462625.1

LIMK2-206, Transcript of LIM domain kinase 2, humanhuman

TSL 2

Gene LIMK2, Length 1,042 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-206ENST00000462625 CCDC146Q8IYE0 955 aa30.52■■■□□ 2.48
LIMK2-206ENST00000462625 KCNQ3O43525 872 aa30.5■■■□□ 2.47
LIMK2-206ENST00000462625 TMPOP42166 694 aaKnown RBP30.5■■■□□ 2.47
LIMK2-206ENST00000462625 ZBTB1Q9Y2K1 713 aa30.48■■■□□ 2.47
LIMK2-206ENST00000462625 SOS1Q07889 1333 aaPredicted RBP30.47■■■□□ 2.47
LIMK2-206ENST00000462625 ZPR1O75312 459 aa30.47■■■□□ 2.47
LIMK2-206ENST00000462625 SNRPA1P09661 255 aaKnown RBP30.46■■■□□ 2.47
LIMK2-206ENST00000462625 GYS1P13807 737 aa30.46■■■□□ 2.47
LIMK2-206ENST00000462625 CANXP27824 592 aaKnown RBP30.46■■■□□ 2.47
LIMK2-206ENST00000462625 KDM3BQ7LBC6 1761 aa30.46■■■□□ 2.47
LIMK2-206ENST00000462625 NEUROD2Q15784 382 aa30.45■■■□□ 2.47
LIMK2-206ENST00000462625 NPM2Q86SE8 214 aaKnown RBP30.45■■■□□ 2.47
LIMK2-206ENST00000462625 THUMPD2Q9BTF0 503 aaKnown RBP30.45■■■□□ 2.47
LIMK2-206ENST00000462625 USP42Q9H9J4 1324 aaKnown RBP30.45■■■□□ 2.46
LIMK2-206ENST00000462625 COL15A1P39059 1388 aa30.44■■■□□ 2.46
LIMK2-206ENST00000462625 MMP10P09238 476 aa30.44■■■□□ 2.46
LIMK2-206ENST00000462625 MIS18AQ9NYP9 233 aa30.44■■■□□ 2.46
LIMK2-206ENST00000462625 CD2APQ9Y5K6 639 aa30.44■■■□□ 2.46
LIMK2-206ENST00000462625 RRP7AQ9Y3A4 280 aaKnown RBP30.43■■■□□ 2.46
LIMK2-206ENST00000462625 A0A087WZG4 1122 aa30.42■■■□□ 2.46
LIMK2-206ENST00000462625 SRP68Q9UHB9 627 aaKnown RBP30.42■■■□□ 2.46
LIMK2-206ENST00000462625 NARFQ9UHQ1 456 aa30.4■■■□□ 2.46
LIMK2-206ENST00000462625 PARP3Q9Y6F1 533 aa30.4■■■□□ 2.46
LIMK2-206ENST00000462625 IL6STP40189 918 aaPredicted RBP30.39■■■□□ 2.46
LIMK2-206ENST00000462625 EIF5P55010 431 aaKnown RBP30.39■■■□□ 2.46
LIMK2-206ENST00000462625 USP16Q9Y5T5 823 aa30.39■■■□□ 2.46
LIMK2-206ENST00000462625 A1BGP04217 495 aa30.38■■■□□ 2.45
LIMK2-206ENST00000462625 USPL1Q5W0Q7 1092 aa30.38■■■□□ 2.45
LIMK2-206ENST00000462625 BABAM1Q9NWV8 329 aa30.38■■■□□ 2.45
LIMK2-206ENST00000462625 ZNF330Q9Y3S2 320 aaPredicted RBP30.38■■■□□ 2.45
LIMK2-206ENST00000462625 NLGN2Q8NFZ4 835 aa30.37■■■□□ 2.45
LIMK2-206ENST00000462625 MRS2Q9HD23 443 aa30.37■■■□□ 2.45
LIMK2-206ENST00000462625 TSPYL4Q9UJ04 414 aa30.37■■■□□ 2.45
LIMK2-206ENST00000462625 LAMB4A4D0S4 1761 aa30.36■■■□□ 2.45
LIMK2-206ENST00000462625 FKBP8Q14318 412 aa30.36■■■□□ 2.45
LIMK2-206ENST00000462625 EIF4A1P60842 406 aaKnown RBP30.35■■■□□ 2.45
LIMK2-206ENST00000462625 CCDC184Q52MB2 194 aa30.35■■■□□ 2.45
LIMK2-206ENST00000462625 PRAMEF22A3QJZ6 481 aa30.34■■■□□ 2.45
LIMK2-206ENST00000462625 GPR162Q16538 588 aa30.34■■■□□ 2.45
LIMK2-206ENST00000462625 TRIM35Q9UPQ4 493 aa30.33■■■□□ 2.45
LIMK2-206ENST00000462625 APAF1O14727 1248 aa30.32■■■□□ 2.44
LIMK2-206ENST00000462625 GIGYF1O75420 1035 aaPredicted RBP30.32■■■□□ 2.44
LIMK2-206ENST00000462625 PELP1Q8IZL8 1130 aaKnown RBP30.32■■■□□ 2.44
LIMK2-206ENST00000462625 KIF13BQ9NQT8 1826 aa30.31■■■□□ 2.44
LIMK2-206ENST00000462625 TM4SF1P30408 202 aa30.29■■■□□ 2.44
LIMK2-206ENST00000462625 TBC1D2BQ9UPU7 963 aa30.29■■■□□ 2.44
LIMK2-206ENST00000462625 LAS1LQ9Y4W2 734 aaKnown RBP30.28■■■□□ 2.44
LIMK2-206ENST00000462625 SCN7AQ01118 1682 aa30.27■■■□□ 2.44
LIMK2-206ENST00000462625 CALD1Q05682 793 aaKnown RBP30.27■■■□□ 2.44
LIMK2-206ENST00000462625 DZIP3Q86Y13 1208 aaKnown RBP30.27■■■□□ 2.44
LIMK2-206ENST00000462625 CHD4Q14839 1912 aa30.26■■■□□ 2.44
LIMK2-206ENST00000462625 PIP4K2AP48426 406 aaPredicted RBP30.26■■■□□ 2.43
LIMK2-206ENST00000462625 BCL2L12Q9HB09 334 aa30.26■■■□□ 2.43
LIMK2-206ENST00000462625 C10orf71Q711Q0 1435 aa30.25■■■□□ 2.43
LIMK2-206ENST00000462625 TGFB2P61812 414 aa30.25■■■□□ 2.43
LIMK2-206ENST00000462625 DDR1Q08345 913 aa30.25■■■□□ 2.43
LIMK2-206ENST00000462625 NFIXQ14938 502 aa30.25■■■□□ 2.43
LIMK2-206ENST00000462625 POLRMTO00411 1230 aaKnown RBP30.24■■■□□ 2.43
LIMK2-206ENST00000462625 CHL1O00533 1208 aa30.24■■■□□ 2.43
LIMK2-206ENST00000462625 AFDNP55196 1824 aaKnown RBP30.24■■■□□ 2.43
LIMK2-206ENST00000462625 BCORQ6W2J9 1755 aa30.23■■■□□ 2.43
LIMK2-206ENST00000462625 NBPF26B4DH59 902 aa30.22■■■□□ 2.43
LIMK2-206ENST00000462625 NBPF10Q6P3W6 841 aaKnown RBP30.22■■■□□ 2.43
LIMK2-206ENST00000462625 NBPF15Q8N660 670 aa30.22■■■□□ 2.43
LIMK2-206ENST00000462625 N4BP2Q86UW6 1770 aaPredicted RBP30.22■■■□□ 2.43
LIMK2-206ENST00000462625 GRIN3BO60391 1043 aa30.21■■■□□ 2.43
LIMK2-206ENST00000462625 CAMTA2O94983 1202 aa30.21■■■□□ 2.43
LIMK2-206ENST00000462625 BICDL1Q6ZP65 573 aa30.21■■■□□ 2.43
LIMK2-206ENST00000462625 CFAP44Q96MT7 982 aa30.21■■■□□ 2.43
LIMK2-206ENST00000462625 ZNF652Q9Y2D9 606 aa30.21■■■□□ 2.43
LIMK2-206ENST00000462625 ERBB4Q15303 1308 aa30.2■■■□□ 2.42
LIMK2-206ENST00000462625 SERPINB2P05120 415 aa30.19■■■□□ 2.42
LIMK2-206ENST00000462625 TBC1D9BQ66K14 1250 aa30.18■■■□□ 2.42
LIMK2-206ENST00000462625 CLEC4GQ6UXB4 293 aa30.18■■■□□ 2.42
LIMK2-206ENST00000462625 SETDB2Q96T68 719 aa30.18■■■□□ 2.42
LIMK2-206ENST00000462625 NRXN2Q9P2S2 1712 aa30.18■■■□□ 2.42
LIMK2-206ENST00000462625 EIF2S2P20042 333 aaKnown RBP30.17■■■□□ 2.42
LIMK2-206ENST00000462625 YY1P25490 414 aa30.17■■■□□ 2.42
LIMK2-206ENST00000462625 GNAI1P63096 354 aa30.17■■■□□ 2.42
LIMK2-206ENST00000462625 GOLGB1Q14789 3259 aaKnown RBP30.17■■■□□ 2.42
LIMK2-206ENST00000462625 PXDNLA1KZ92 1463 aa30.17■■■□□ 2.42
LIMK2-206ENST00000462625 KIAA1551Q9HCM1 1747 aa30.16■■■□□ 2.42
LIMK2-206ENST00000462625 RGL2O15211 777 aa30.16■■■□□ 2.42
LIMK2-206ENST00000462625 NGEFQ8N5V2 710 aa30.16■■■□□ 2.42
LIMK2-206ENST00000462625 IFT57Q9NWB7 429 aa30.16■■■□□ 2.42
LIMK2-206ENST00000462625 CARMIL3Q8ND23 1372 aa30.15■■■□□ 2.42
LIMK2-206ENST00000462625 A0A0G2JLW4 131 aa30.15■■■□□ 2.42
LIMK2-206ENST00000462625 MYL6BP14649 208 aa30.15■■■□□ 2.42
LIMK2-206ENST00000462625 YBX3P16989 372 aaKnown RBP eCLIP30.15■■■□□ 2.42
LIMK2-206ENST00000462625 NPHP1O15259 732 aa30.13■■■□□ 2.41
LIMK2-206ENST00000462625 DPEP1P16444 411 aa30.13■■■□□ 2.41
LIMK2-206ENST00000462625 KIF6Q6ZMV9 814 aa30.13■■■□□ 2.41
LIMK2-206ENST00000462625 CCDC27Q2M243 656 aa30.12■■■□□ 2.41
LIMK2-206ENST00000462625 NCBP3Q53F19 620 aaKnown RBP30.12■■■□□ 2.41
LIMK2-206ENST00000462625 FAM9BQ8IZU0 186 aa30.12■■■□□ 2.41
LIMK2-206ENST00000462625 MBIPQ9NS73 344 aa30.12■■■□□ 2.41
LIMK2-206ENST00000462625 UTRNP46939 3433 aa30.12■■■□□ 2.41
LIMK2-206ENST00000462625 NUP98P52948 1817 aa30.11■■■□□ 2.41
LIMK2-206ENST00000462625 HOXB7P09629 217 aa30.11■■■□□ 2.41
LIMK2-206ENST00000462625 ZNF853P0CG23 659 aa30.11■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms