RNA–Protein interactions for RNA: ENST00000462324.2

PHGDH-203, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 5

Gene PHGDH, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-203ENST00000462324 ZNF827Q17R98 1081 aa16.98■□□□□ 0.31
PHGDH-203ENST00000462324 INTS5Q6P9B9 1019 aaKnown RBP16.98■□□□□ 0.31
PHGDH-203ENST00000462324 ANO8Q9HCE9 1232 aaPredicted RBP16.98■□□□□ 0.31
PHGDH-203ENST00000462324 SPINK5Q9NQ38 1064 aaPredicted RBP16.98■□□□□ 0.31
PHGDH-203ENST00000462324 UBR2Q8IWV8 1755 aa16.97■□□□□ 0.31
PHGDH-203ENST00000462324 PRAMEF22A3QJZ6 481 aa16.97■□□□□ 0.31
PHGDH-203ENST00000462324 ADRA2BP18089 450 aa16.97■□□□□ 0.31
PHGDH-203ENST00000462324 SSFA2P28290 1259 aa16.97■□□□□ 0.31
PHGDH-203ENST00000462324 TRAPPC3LQ5T215 181 aa16.97■□□□□ 0.31
PHGDH-203ENST00000462324 C8orf58Q8NAV2 365 aa16.97■□□□□ 0.31
PHGDH-203ENST00000462324 KDM3BQ7LBC6 1761 aa16.97■□□□□ 0.31
PHGDH-203ENST00000462324 ERBB4Q15303 1308 aa16.96■□□□□ 0.31
PHGDH-203ENST00000462324 EIF2S2P20042 333 aaKnown RBP16.96■□□□□ 0.31
PHGDH-203ENST00000462324 R3HDM1Q15032 1099 aaKnown RBP16.96■□□□□ 0.31
PHGDH-203ENST00000462324 TRMT2AQ8IZ69 625 aaKnown RBP16.96■□□□□ 0.31
PHGDH-203ENST00000462324 CICQ96RK0 1608 aaPredicted RBP16.96■□□□□ 0.3
PHGDH-203ENST00000462324 A0A087WZG4 1122 aa16.95■□□□□ 0.3
PHGDH-203ENST00000462324 ELL2O00472 640 aaPredicted RBP16.95■□□□□ 0.3
PHGDH-203ENST00000462324 A1BGP04217 495 aa16.95■□□□□ 0.3
PHGDH-203ENST00000462324 CANXP27824 592 aaKnown RBP16.95■□□□□ 0.3
PHGDH-203ENST00000462324 IL6STP40189 918 aaPredicted RBP16.95■□□□□ 0.3
PHGDH-203ENST00000462324 EXOSC9Q06265 439 aaKnown RBP16.95■□□□□ 0.3
PHGDH-203ENST00000462324 KRT24Q2M2I5 525 aa16.95■□□□□ 0.3
PHGDH-203ENST00000462324 TWISTNBQ3B726 338 aaPredicted RBP16.95■□□□□ 0.3
PHGDH-203ENST00000462324 HDGFL1Q5TGJ6 251 aa16.95■□□□□ 0.3
PHGDH-203ENST00000462324 CDCA7LQ96GN5 454 aa16.95■□□□□ 0.3
PHGDH-203ENST00000462324 NUP188Q5SRE5 1749 aa16.95■□□□□ 0.3
PHGDH-203ENST00000462324 C5P01031 1676 aa16.94■□□□□ 0.3
PHGDH-203ENST00000462324 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.94■□□□□ 0.3
PHGDH-203ENST00000462324 CCDC30Q5VVM6 783 aa16.94■□□□□ 0.3
PHGDH-203ENST00000462324 ZBTB1Q9Y2K1 713 aa16.94■□□□□ 0.3
PHGDH-203ENST00000462324 C4BP0C0L5 1744 aa16.93■□□□□ 0.3
PHGDH-203ENST00000462324 MSH5O43196 834 aa16.93■□□□□ 0.3
PHGDH-203ENST00000462324 RFC4P35249 363 aa16.93■□□□□ 0.3
PHGDH-203ENST00000462324 EIF5P55010 431 aaKnown RBP16.93■□□□□ 0.3
PHGDH-203ENST00000462324 TSPYL6Q8N831 410 aa16.93■□□□□ 0.3
PHGDH-203ENST00000462324 SLC16A10Q8TF71 515 aa16.93■□□□□ 0.3
PHGDH-203ENST00000462324 DBF4Q9UBU7 674 aaPredicted RBP16.93■□□□□ 0.3
PHGDH-203ENST00000462324 PHF14O94880 888 aa16.92■□□□□ 0.3
PHGDH-203ENST00000462324 CT47B1P0C2W7 299 aaPredicted RBP16.92■□□□□ 0.3
PHGDH-203ENST00000462324 ARHGEF1Q92888 912 aaKnown RBP16.92■□□□□ 0.3
PHGDH-203ENST00000462324 TJP1Q07157 1748 aa16.92■□□□□ 0.3
PHGDH-203ENST00000462324 PNPLA7Q6ZV29 1317 aa16.92■□□□□ 0.3
PHGDH-203ENST00000462324 PSDA5PKW4 1024 aaPredicted RBP16.91■□□□□ 0.3
PHGDH-203ENST00000462324 NBPF26B4DH59 902 aa16.91■□□□□ 0.3
PHGDH-203ENST00000462324 VAMP4O75379 141 aa16.91■□□□□ 0.3
PHGDH-203ENST00000462324 NBPF10Q6P3W6 841 aaKnown RBP16.91■□□□□ 0.3
PHGDH-203ENST00000462324 COL23A1Q86Y22 540 aaPredicted RBP16.91■□□□□ 0.3
PHGDH-203ENST00000462324 NBPF15Q8N660 670 aa16.91■□□□□ 0.3
PHGDH-203ENST00000462324 ZNF428Q96B54 188 aa16.91■□□□□ 0.3
PHGDH-203ENST00000462324 STK31Q9BXU1 1019 aa16.91■□□□□ 0.3
PHGDH-203ENST00000462324 DDX21Q9NR30 783 aaKnown RBP eCLIP16.91■□□□□ 0.3
PHGDH-203ENST00000462324 NECTIN2Q92692 538 aa16.9■□□□□ 0.3
PHGDH-203ENST00000462324 HYPKQ9NX55 129 aa16.9■□□□□ 0.3
PHGDH-203ENST00000462324 ZNF330Q9Y3S2 320 aaPredicted RBP16.9■□□□□ 0.3
PHGDH-203ENST00000462324 TAF1LQ8IZX4 1826 aa16.9■□□□□ 0.3
PHGDH-203ENST00000462324 ZPR1O75312 459 aa16.89■□□□□ 0.29
PHGDH-203ENST00000462324 MYL6BP14649 208 aa16.89■□□□□ 0.29
PHGDH-203ENST00000462324 PDIA6Q15084 440 aa16.89■□□□□ 0.29
PHGDH-203ENST00000462324 COL5A3P25940 1745 aaPredicted RBP16.89■□□□□ 0.29
PHGDH-203ENST00000462324 COL15A1P39059 1388 aa16.89■□□□□ 0.29
PHGDH-203ENST00000462324 AMIGO3Q86WK7 504 aa16.88■□□□□ 0.29
PHGDH-203ENST00000462324 ARXQ96QS3 562 aa16.88■□□□□ 0.29
PHGDH-203ENST00000462324 CHPF2Q9P2E5 772 aa16.88■□□□□ 0.29
PHGDH-203ENST00000462324 NARFQ9UHQ1 456 aa16.88■□□□□ 0.29
PHGDH-203ENST00000462324 RGL2O15211 777 aa16.87■□□□□ 0.29
PHGDH-203ENST00000462324 PIP4K2AP48426 406 aaPredicted RBP16.87■□□□□ 0.29
PHGDH-203ENST00000462324 DZIP3Q86Y13 1208 aaKnown RBP16.87■□□□□ 0.29
PHGDH-203ENST00000462324 NLGN1Q8N2Q7 840 aa16.87■□□□□ 0.29
PHGDH-203ENST00000462324 YTHDC1Q96MU7 727 aaKnown RBP16.87■□□□□ 0.29
PHGDH-203ENST00000462324 SRCAPQ6ZRS2 3230 aa16.86■□□□□ 0.29
PHGDH-203ENST00000462324 SMIM5Q71RC9 77 aa16.86■□□□□ 0.29
PHGDH-203ENST00000462324 MTFR1LQ9H019 292 aa16.86■□□□□ 0.29
PHGDH-203ENST00000462324 ERVV-1B6SEH8 477 aa16.85■□□□□ 0.29
PHGDH-203ENST00000462324 SLC4A2P04920 1241 aa16.85■□□□□ 0.29
PHGDH-203ENST00000462324 KIF6Q6ZMV9 814 aa16.85■□□□□ 0.29
PHGDH-203ENST00000462324 COPS6Q7L5N1 327 aa16.85■□□□□ 0.29
PHGDH-203ENST00000462324 TBC1D2BQ9UPU7 963 aa16.85■□□□□ 0.29
PHGDH-203ENST00000462324 USP42Q9H9J4 1324 aaKnown RBP16.85■□□□□ 0.29
PHGDH-203ENST00000462324 PROSER3Q2NL68 480 aa16.84■□□□□ 0.29
PHGDH-203ENST00000462324 ALDH1L2Q3SY69 923 aa16.84■□□□□ 0.29
PHGDH-203ENST00000462324 USPL1Q5W0Q7 1092 aa16.84■□□□□ 0.29
PHGDH-203ENST00000462324 CLEC4GQ6UXB4 293 aa16.84■□□□□ 0.29
PHGDH-203ENST00000462324 LRP10Q7Z4F1 713 aa16.84■□□□□ 0.29
PHGDH-203ENST00000462324 ZNF652Q9Y2D9 606 aa16.84■□□□□ 0.29
PHGDH-203ENST00000462324 LAMB4A4D0S4 1761 aa16.84■□□□□ 0.29
PHGDH-203ENST00000462324 DDX58O95786 925 aaKnown RBP16.83■□□□□ 0.28
PHGDH-203ENST00000462324 ANXA1P04083 346 aa16.83■□□□□ 0.28
PHGDH-203ENST00000462324 XAGE3Q8WTP9 111 aa16.83■□□□□ 0.28
PHGDH-203ENST00000462324 PDGFDQ9GZP0 370 aaPredicted RBP16.83■□□□□ 0.28
PHGDH-203ENST00000462324 SPON1Q9HCB6 807 aa16.83■□□□□ 0.28
PHGDH-203ENST00000462324 MYH14Q7Z406 1995 aaKnown RBP16.82■□□□□ 0.28
PHGDH-203ENST00000462324 MAP3K15Q6ZN16 1313 aa16.82■□□□□ 0.28
PHGDH-203ENST00000462324 CAMTA2O94983 1202 aa16.82■□□□□ 0.28
PHGDH-203ENST00000462324 GYS1P13807 737 aa16.82■□□□□ 0.28
PHGDH-203ENST00000462324 AIMP1Q12904 312 aaKnown RBP16.82■□□□□ 0.28
PHGDH-203ENST00000462324 ANKRD13DQ6ZTN6 518 aa16.82■□□□□ 0.28
PHGDH-203ENST00000462324 SRP68Q9UHB9 627 aaKnown RBP16.82■□□□□ 0.28
PHGDH-203ENST00000462324 QSER1Q2KHR3 1735 aa16.82■□□□□ 0.28
PHGDH-203ENST00000462324 TCERG1O14776 1098 aaKnown RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms