RNA–Protein interactions for RNA: ENST00000462322.2

SMKR1-201, Transcript of small lysine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMKR1, Length 1,035 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1-201ENST00000462322 SRP68Q9UHB9 627 aaKnown RBP31.67■■■□□ 2.66
SMKR1-201ENST00000462322 CD2APQ9Y5K6 639 aa31.67■■■□□ 2.66
SMKR1-201ENST00000462322 CANXP27824 592 aaKnown RBP31.65■■■□□ 2.66
SMKR1-201ENST00000462322 USP42Q9H9J4 1324 aaKnown RBP31.65■■■□□ 2.66
SMKR1-201ENST00000462322 ZPR1O75312 459 aa31.63■■■□□ 2.65
SMKR1-201ENST00000462322 CCDC146Q8IYE0 955 aa31.63■■■□□ 2.65
SMKR1-201ENST00000462322 COL15A1P39059 1388 aa31.62■■■□□ 2.65
SMKR1-201ENST00000462322 RIPK4P57078 832 aa31.62■■■□□ 2.65
SMKR1-201ENST00000462322 THUMPD2Q9BTF0 503 aaKnown RBP31.62■■■□□ 2.65
SMKR1-201ENST00000462322 MIS18AQ9NYP9 233 aa31.62■■■□□ 2.65
SMKR1-201ENST00000462322 GPR162Q16538 588 aa31.61■■■□□ 2.65
SMKR1-201ENST00000462322 PELP1Q8IZL8 1130 aaKnown RBP31.61■■■□□ 2.65
SMKR1-201ENST00000462322 ADAMTS8Q9UP79 889 aa31.61■■■□□ 2.65
SMKR1-201ENST00000462322 PNISRQ8TF01 805 aaKnown RBP31.6■■■□□ 2.65
SMKR1-201ENST00000462322 TMPOP42166 694 aaKnown RBP31.59■■■□□ 2.65
SMKR1-201ENST00000462322 FKBP8Q14318 412 aa31.59■■■□□ 2.65
SMKR1-201ENST00000462322 USPL1Q5W0Q7 1092 aa31.59■■■□□ 2.65
SMKR1-201ENST00000462322 PARP3Q9Y6F1 533 aa31.59■■■□□ 2.65
SMKR1-201ENST00000462322 SNRPA1P09661 255 aaKnown RBP31.58■■■□□ 2.65
SMKR1-201ENST00000462322 RUNDC1Q96C34 613 aa31.58■■■□□ 2.65
SMKR1-201ENST00000462322 NARFQ9UHQ1 456 aa31.58■■■□□ 2.65
SMKR1-201ENST00000462322 EIF5P55010 431 aaKnown RBP31.57■■■□□ 2.64
SMKR1-201ENST00000462322 USP16Q9Y5T5 823 aa31.57■■■□□ 2.64
SMKR1-201ENST00000462322 A1BGP04217 495 aa31.56■■■□□ 2.64
SMKR1-201ENST00000462322 RRP7AQ9Y3A4 280 aaKnown RBP31.56■■■□□ 2.64
SMKR1-201ENST00000462322 ZNF330Q9Y3S2 320 aaPredicted RBP31.56■■■□□ 2.64
SMKR1-201ENST00000462322 A0A087WZG4 1122 aa31.55■■■□□ 2.64
SMKR1-201ENST00000462322 PRAMEF22A3QJZ6 481 aa31.55■■■□□ 2.64
SMKR1-201ENST00000462322 LMOD3Q0VAK6 560 aa31.55■■■□□ 2.64
SMKR1-201ENST00000462322 NEUROD2Q15784 382 aa31.54■■■□□ 2.64
SMKR1-201ENST00000462322 IL6STP40189 918 aaPredicted RBP31.53■■■□□ 2.64
SMKR1-201ENST00000462322 NPM2Q86SE8 214 aaKnown RBP31.53■■■□□ 2.64
SMKR1-201ENST00000462322 YY1P25490 414 aa31.51■■■□□ 2.63
SMKR1-201ENST00000462322 DDR1Q08345 913 aa31.5■■■□□ 2.63
SMKR1-201ENST00000462322 KDM3BQ7LBC6 1761 aa31.49■■■□□ 2.63
SMKR1-201ENST00000462322 ANP32CO43423 234 aa31.49■■■□□ 2.63
SMKR1-201ENST00000462322 TM4SF1P30408 202 aa31.49■■■□□ 2.63
SMKR1-201ENST00000462322 BCL2L12Q9HB09 334 aa31.49■■■□□ 2.63
SMKR1-201ENST00000462322 PIP4K2AP48426 406 aaPredicted RBP31.48■■■□□ 2.63
SMKR1-201ENST00000462322 TBC1D2BQ9UPU7 963 aa31.48■■■□□ 2.63
SMKR1-201ENST00000462322 C10orf71Q711Q0 1435 aa31.48■■■□□ 2.63
SMKR1-201ENST00000462322 YBX3P16989 372 aaKnown RBP eCLIP31.47■■■□□ 2.63
SMKR1-201ENST00000462322 EIF4A1P60842 406 aaKnown RBP31.47■■■□□ 2.63
SMKR1-201ENST00000462322 TSPYL4Q9UJ04 414 aa31.47■■■□□ 2.63
SMKR1-201ENST00000462322 POLRMTO00411 1230 aaKnown RBP31.46■■■□□ 2.63
SMKR1-201ENST00000462322 NFIXQ14938 502 aa31.46■■■□□ 2.63
SMKR1-201ENST00000462322 CCDC184Q52MB2 194 aa31.45■■■□□ 2.63
SMKR1-201ENST00000462322 GRIN3BO60391 1043 aa31.44■■■□□ 2.62
SMKR1-201ENST00000462322 GIGYF1O75420 1035 aaPredicted RBP31.44■■■□□ 2.62
SMKR1-201ENST00000462322 TGFB2P61812 414 aa31.44■■■□□ 2.62
SMKR1-201ENST00000462322 WWC3Q9ULE0 1092 aa31.44■■■□□ 2.62
SMKR1-201ENST00000462322 KIF13BQ9NQT8 1826 aa31.44■■■□□ 2.62
SMKR1-201ENST00000462322 UTRNP46939 3433 aa31.43■■■□□ 2.62
SMKR1-201ENST00000462322 TRIM35Q9UPQ4 493 aa31.43■■■□□ 2.62
SMKR1-201ENST00000462322 GOLGB1Q14789 3259 aaKnown RBP31.43■■■□□ 2.62
SMKR1-201ENST00000462322 DZIP3Q86Y13 1208 aaKnown RBP31.42■■■□□ 2.62
SMKR1-201ENST00000462322 BABAM1Q9NWV8 329 aa31.42■■■□□ 2.62
SMKR1-201ENST00000462322 PXDNLA1KZ92 1463 aa31.41■■■□□ 2.62
SMKR1-201ENST00000462322 NBPF26B4DH59 902 aa31.41■■■□□ 2.62
SMKR1-201ENST00000462322 NBPF10Q6P3W6 841 aaKnown RBP31.41■■■□□ 2.62
SMKR1-201ENST00000462322 BICDL1Q6ZP65 573 aa31.41■■■□□ 2.62
SMKR1-201ENST00000462322 NBPF15Q8N660 670 aa31.41■■■□□ 2.62
SMKR1-201ENST00000462322 A0A0G2JLW4 131 aa31.4■■■□□ 2.62
SMKR1-201ENST00000462322 APAF1O14727 1248 aa31.39■■■□□ 2.62
SMKR1-201ENST00000462322 CAMTA2O94983 1202 aa31.39■■■□□ 2.62
SMKR1-201ENST00000462322 LAMB4A4D0S4 1761 aa31.38■■■□□ 2.61
SMKR1-201ENST00000462322 SERPINB2P05120 415 aa31.38■■■□□ 2.61
SMKR1-201ENST00000462322 DPEP1P16444 411 aa31.38■■■□□ 2.61
SMKR1-201ENST00000462322 TBC1D9BQ66K14 1250 aa31.38■■■□□ 2.61
SMKR1-201ENST00000462322 SCN7AQ01118 1682 aa31.38■■■□□ 2.61
SMKR1-201ENST00000462322 CHD4Q14839 1912 aa31.37■■■□□ 2.61
SMKR1-201ENST00000462322 MRS2Q9HD23 443 aa31.37■■■□□ 2.61
SMKR1-201ENST00000462322 LAS1LQ9Y4W2 734 aaKnown RBP31.37■■■□□ 2.61
SMKR1-201ENST00000462322 N4BP2Q86UW6 1770 aaPredicted RBP31.36■■■□□ 2.61
SMKR1-201ENST00000462322 KIAA1551Q9HCM1 1747 aa31.35■■■□□ 2.61
SMKR1-201ENST00000462322 CHL1O00533 1208 aa31.34■■■□□ 2.61
SMKR1-201ENST00000462322 AFDNP55196 1824 aaKnown RBP31.33■■■□□ 2.61
SMKR1-201ENST00000462322 SETDB2Q96T68 719 aa31.32■■■□□ 2.6
SMKR1-201ENST00000462322 NGEFQ8N5V2 710 aa31.31■■■□□ 2.6
SMKR1-201ENST00000462322 BCS1LQ9Y276 419 aa31.31■■■□□ 2.6
SMKR1-201ENST00000462322 ZNF652Q9Y2D9 606 aa31.31■■■□□ 2.6
SMKR1-201ENST00000462322 CARMIL3Q8ND23 1372 aa31.3■■■□□ 2.6
SMKR1-201ENST00000462322 BCORQ6W2J9 1755 aa31.3■■■□□ 2.6
SMKR1-201ENST00000462322 NRXN2Q9P2S2 1712 aa31.3■■■□□ 2.6
SMKR1-201ENST00000462322 CLEC4GQ6UXB4 293 aa31.3■■■□□ 2.6
SMKR1-201ENST00000462322 MYL6BP14649 208 aa31.29■■■□□ 2.6
SMKR1-201ENST00000462322 EIF2S2P20042 333 aaKnown RBP31.29■■■□□ 2.6
SMKR1-201ENST00000462322 KCNA3P22001 575 aa31.29■■■□□ 2.6
SMKR1-201ENST00000462322 CHRNA5P30532 468 aa31.29■■■□□ 2.6
SMKR1-201ENST00000462322 PIM2Q9P1W9 311 aa31.28■■■□□ 2.6
SMKR1-201ENST00000462322 ERBB4Q15303 1308 aa31.27■■■□□ 2.6
SMKR1-201ENST00000462322 CFAP44Q96MT7 982 aa31.27■■■□□ 2.6
SMKR1-201ENST00000462322 RGL2O15211 777 aa31.25■■■□□ 2.59
SMKR1-201ENST00000462322 NPHP1O15259 732 aa31.25■■■□□ 2.59
SMKR1-201ENST00000462322 CALD1Q05682 793 aaKnown RBP31.25■■■□□ 2.59
SMKR1-201ENST00000462322 KRT24Q2M2I5 525 aa31.24■■■□□ 2.59
SMKR1-201ENST00000462322 PRR5LQ6MZQ0 368 aa31.24■■■□□ 2.59
SMKR1-201ENST00000462322 KIF6Q6ZMV9 814 aa31.24■■■□□ 2.59
SMKR1-201ENST00000462322 DALRD3Q5D0E6 543 aaKnown RBP31.23■■■□□ 2.59
SMKR1-201ENST00000462322 CNBD1Q8NA66 436 aa31.23■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms