RNA–Protein interactions for RNA: ENST00000461869.5

SF3A3-203, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-203ENST00000461869 SLC52A2Q9HAB3 445 aa20.76■□□□□ 0.91
SF3A3-203ENST00000461869 ARFGEF1Q9Y6D6 1849 aa20.76■□□□□ 0.91
SF3A3-203ENST00000461869 KDM2BQ8NHM5 1336 aa20.76■□□□□ 0.91
SF3A3-203ENST00000461869 LGR6Q9HBX8 967 aa20.75■□□□□ 0.91
SF3A3-203ENST00000461869 SOS1Q07889 1333 aaPredicted RBP20.74■□□□□ 0.91
SF3A3-203ENST00000461869 KCPQ6ZWJ8 1503 aa20.73■□□□□ 0.91
SF3A3-203ENST00000461869 AMER1Q5JTC6 1135 aaPredicted RBP20.73■□□□□ 0.91
SF3A3-203ENST00000461869 SCN11AQ9UI33 1791 aa20.72■□□□□ 0.91
SF3A3-203ENST00000461869 RNMTO43148 476 aaKnown RBP20.72■□□□□ 0.91
SF3A3-203ENST00000461869 CYP19A1P11511 503 aaPredicted RBP20.72■□□□□ 0.91
SF3A3-203ENST00000461869 FSTL1Q12841 308 aa20.72■□□□□ 0.91
SF3A3-203ENST00000461869 SLC39A6Q13433 755 aa20.72■□□□□ 0.91
SF3A3-203ENST00000461869 RRAGCQ9HB90 399 aa20.72■□□□□ 0.91
SF3A3-203ENST00000461869 MYBBP1AQ9BQG0 1328 aaKnown RBP20.71■□□□□ 0.91
SF3A3-203ENST00000461869 ADAMTS7Q9UKP4 1686 aa20.7■□□□□ 0.91
SF3A3-203ENST00000461869 HMOX1P09601 288 aa20.7■□□□□ 0.9
SF3A3-203ENST00000461869 HTRA3P83110 453 aa20.7■□□□□ 0.9
SF3A3-203ENST00000461869 NFIXQ14938 502 aa20.7■□□□□ 0.9
SF3A3-203ENST00000461869 NARFQ9UHQ1 456 aa20.7■□□□□ 0.9
SF3A3-203ENST00000461869 CC2D1BQ5T0F9 858 aaKnown RBP20.68■□□□□ 0.9
SF3A3-203ENST00000461869 ZBTB1Q9Y2K1 713 aa20.68■□□□□ 0.9
SF3A3-203ENST00000461869 COL15A1P39059 1388 aa20.68■□□□□ 0.9
SF3A3-203ENST00000461869 WDR90Q96KV7 1748 aa20.67■□□□□ 0.9
SF3A3-203ENST00000461869 SERPINB2P05120 415 aa20.67■□□□□ 0.9
SF3A3-203ENST00000461869 RASSF7Q02833 373 aa20.67■□□□□ 0.9
SF3A3-203ENST00000461869 KLRG1Q96E93 195 aa20.67■□□□□ 0.9
SF3A3-203ENST00000461869 MRC1P22897 1456 aa20.67■□□□□ 0.9
SF3A3-203ENST00000461869 MTHFSDQ2M296 383 aaKnown RBP20.66■□□□□ 0.9
SF3A3-203ENST00000461869 VSIG10Q8N0Z9 540 aa20.66■□□□□ 0.9
SF3A3-203ENST00000461869 BCL2L12Q9HB09 334 aa20.66■□□□□ 0.9
SF3A3-203ENST00000461869 CNGB1Q14028 1251 aaPredicted RBP20.65■□□□□ 0.9
SF3A3-203ENST00000461869 SMC1BQ8NDV3 1235 aa20.65■□□□□ 0.9
SF3A3-203ENST00000461869 ZC3H4Q9UPT8 1303 aaKnown RBP20.64■□□□□ 0.89
SF3A3-203ENST00000461869 LMNB1P20700 586 aa20.64■□□□□ 0.89
SF3A3-203ENST00000461869 CANXP27824 592 aaKnown RBP20.64■□□□□ 0.89
SF3A3-203ENST00000461869 C2CD5Q86YS7 1000 aa20.64■□□□□ 0.89
SF3A3-203ENST00000461869 TTLL6Q8N841 843 aa20.64■□□□□ 0.89
SF3A3-203ENST00000461869 SBF1O95248 1867 aa20.64■□□□□ 0.89
SF3A3-203ENST00000461869 DIAPH1O60610 1272 aaKnown RBP20.63■□□□□ 0.89
SF3A3-203ENST00000461869 JMYQ8N9B5 988 aa20.63■□□□□ 0.89
SF3A3-203ENST00000461869 TNRC6CQ9HCJ0 1690 aaKnown RBP20.63■□□□□ 0.89
SF3A3-203ENST00000461869 H0YIN7 160 aa20.62■□□□□ 0.89
SF3A3-203ENST00000461869 BICDL1Q6ZP65 573 aa20.62■□□□□ 0.89
SF3A3-203ENST00000461869 MRS2Q9HD23 443 aa20.62■□□□□ 0.89
SF3A3-203ENST00000461869 AFDNP55196 1824 aaKnown RBP20.62■□□□□ 0.89
SF3A3-203ENST00000461869 GLTPD2A6NH11 291 aa20.61■□□□□ 0.89
SF3A3-203ENST00000461869 STARD3NLO95772 234 aa20.61■□□□□ 0.89
SF3A3-203ENST00000461869 VEGFAP15692 232 aaPredicted RBP20.61■□□□□ 0.89
SF3A3-203ENST00000461869 PRELPP51888 382 aa20.61■□□□□ 0.89
SF3A3-203ENST00000461869 TTC5Q8N0Z6 440 aa20.61■□□□□ 0.89
SF3A3-203ENST00000461869 NRXN2Q9P2S2 1712 aa20.61■□□□□ 0.89
SF3A3-203ENST00000461869 A0A087WZG4 1122 aa20.6■□□□□ 0.89
SF3A3-203ENST00000461869 EIF5P55010 431 aaKnown RBP20.59■□□□□ 0.89
SF3A3-203ENST00000461869 CARMIL3Q8ND23 1372 aa20.59■□□□□ 0.89
SF3A3-203ENST00000461869 NFKBIEO00221 500 aa20.57■□□□□ 0.88
SF3A3-203ENST00000461869 COL13A1Q5TAT6 717 aaPredicted RBP20.57■□□□□ 0.88
SF3A3-203ENST00000461869 TBC1D9BQ66K14 1250 aa20.57■□□□□ 0.88
SF3A3-203ENST00000461869 ZNF622Q969S3 477 aaKnown RBP eCLIP20.57■□□□□ 0.883e-11■□□□□ 10.1
SF3A3-203ENST00000461869 VIRMAQ69YN4 1812 aaKnown RBP20.57■□□□□ 0.88
SF3A3-203ENST00000461869 DLEC1Q9Y238 1755 aa20.57■□□□□ 0.88
SF3A3-203ENST00000461869 TEFQ10587 303 aa20.56■□□□□ 0.88
SF3A3-203ENST00000461869 ZNF496Q96IT1 587 aaPredicted RBP20.56■□□□□ 0.88
SF3A3-203ENST00000461869 TEX13AQ9BXU3 409 aaPredicted RBP20.56■□□□□ 0.88
SF3A3-203ENST00000461869 PPP2R1AP30153 589 aa20.55■□□□□ 0.88
SF3A3-203ENST00000461869 PDE6BP35913 854 aa20.55■□□□□ 0.88
SF3A3-203ENST00000461869 ZNF790Q6PG37 636 aa20.55■□□□□ 0.88
SF3A3-203ENST00000461869 IL17REQ8NFR9 667 aa20.55■□□□□ 0.88
SF3A3-203ENST00000461869 PDZRN3Q9UPQ7 1066 aa20.55■□□□□ 0.88
SF3A3-203ENST00000461869 ZNF330Q9Y3S2 320 aaPredicted RBP20.55■□□□□ 0.88
SF3A3-203ENST00000461869 UBR2Q8IWV8 1755 aa20.54■□□□□ 0.88
SF3A3-203ENST00000461869 GNAT3A8MTJ3 354 aa20.54■□□□□ 0.88
SF3A3-203ENST00000461869 U2SURPO15042 1029 aaKnown RBP20.54■□□□□ 0.88
SF3A3-203ENST00000461869 DPY19L2Q6NUT2 758 aa20.54■□□□□ 0.88
SF3A3-203ENST00000461869 BRIP1Q9BX63 1249 aa20.54■□□□□ 0.88
SF3A3-203ENST00000461869 TBC1D2BQ9UPU7 963 aa20.54■□□□□ 0.88
SF3A3-203ENST00000461869 HEG1Q9ULI3 1381 aa20.54■□□□□ 0.88
SF3A3-203ENST00000461869 C21orf2O43822 256 aa20.53■□□□□ 0.88
SF3A3-203ENST00000461869 CCDC24Q8N4L8 307 aa20.53■□□□□ 0.88
SF3A3-203ENST00000461869 GAS2L2Q8NHY3 880 aa20.53■□□□□ 0.88
SF3A3-203ENST00000461869 ZNF219Q9P2Y4 722 aaPredicted RBP20.53■□□□□ 0.88
SF3A3-203ENST00000461869 IL6STP40189 918 aaPredicted RBP20.52■□□□□ 0.88
SF3A3-203ENST00000461869 PRR5LQ6MZQ0 368 aa20.52■□□□□ 0.88
SF3A3-203ENST00000461869 POTECB2RU33 542 aa20.51■□□□□ 0.87
SF3A3-203ENST00000461869 ERFEQ4G0M1 354 aa20.51■□□□□ 0.87
SF3A3-203ENST00000461869 NPM2Q86SE8 214 aaKnown RBP20.51■□□□□ 0.87
SF3A3-203ENST00000461869 TIAM2Q8IVF5 1701 aa20.5■□□□□ 0.87
SF3A3-203ENST00000461869 A1BGP04217 495 aa20.5■□□□□ 0.87
SF3A3-203ENST00000461869 FMNL2Q96PY5 1086 aa20.5■□□□□ 0.87
SF3A3-203ENST00000461869 SETDB2Q96T68 719 aa20.5■□□□□ 0.87
SF3A3-203ENST00000461869 NPHP1O15259 732 aa20.49■□□□□ 0.87
SF3A3-203ENST00000461869 CCDC184Q52MB2 194 aa20.49■□□□□ 0.87
SF3A3-203ENST00000461869 CCDC88AQ3V6T2 1871 aa20.49■□□□□ 0.87
SF3A3-203ENST00000461869 TNS4Q8IZW8 715 aa20.48■□□□□ 0.87
SF3A3-203ENST00000461869 CNBD1Q8NA66 436 aa20.48■□□□□ 0.87
SF3A3-203ENST00000461869 COL3A1P02461 1466 aaPredicted RBP20.48■□□□□ 0.87
SF3A3-203ENST00000461869 ANKRD31Q8N7Z5 1873 aa20.47■□□□□ 0.87
SF3A3-203ENST00000461869 CAMTA2O94983 1202 aa20.47■□□□□ 0.87
SF3A3-203ENST00000461869 CNKSR1Q969H4 720 aa20.47■□□□□ 0.87
SF3A3-203ENST00000461869 YTHDC1Q96MU7 727 aaKnown RBP20.47■□□□□ 0.87
SF3A3-203ENST00000461869 TAOK3Q9H2K8 898 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms