RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-204ENST00000461507 DDR1Q08345 913 aa16.94■□□□□ 0.3
FDPS-204ENST00000461507 PARP3Q9Y6F1 533 aa16.94■□□□□ 0.3
FDPS-204ENST00000461507 PRKAR2BP31323 418 aa16.93■□□□□ 0.3
FDPS-204ENST00000461507 C1QTNF8P60827 252 aa16.93■□□□□ 0.3
FDPS-204ENST00000461507 ZBTB1Q9Y2K1 713 aa16.93■□□□□ 0.3
FDPS-204ENST00000461507 HEG1Q9ULI3 1381 aa16.92■□□□□ 0.3
FDPS-204ENST00000461507 TM4SF1P30408 202 aa16.92■□□□□ 0.3
FDPS-204ENST00000461507 PHACTR3Q96KR7 559 aa16.92■□□□□ 0.3
FDPS-204ENST00000461507 NARFQ9UHQ1 456 aa16.92■□□□□ 0.3
FDPS-204ENST00000461507 POLRMTO00411 1230 aaKnown RBP16.91■□□□□ 0.3
FDPS-204ENST00000461507 GIGYF1O75420 1035 aaPredicted RBP16.91■□□□□ 0.3
FDPS-204ENST00000461507 TEFQ10587 303 aa16.91■□□□□ 0.3
FDPS-204ENST00000461507 ZNF790Q6PG37 636 aa16.91■□□□□ 0.3
FDPS-204ENST00000461507 TTC5Q8N0Z6 440 aa16.91■□□□□ 0.3
FDPS-204ENST00000461507 BCORQ6W2J9 1755 aa16.91■□□□□ 0.3
FDPS-204ENST00000461507 MYBBP1AQ9BQG0 1328 aaKnown RBP16.91■□□□□ 0.3
FDPS-204ENST00000461507 DPEP1P16444 411 aa16.9■□□□□ 0.3
FDPS-204ENST00000461507 USPL1Q5W0Q7 1092 aa16.9■□□□□ 0.3
FDPS-204ENST00000461507 ZNF496Q96IT1 587 aaPredicted RBP16.9■□□□□ 0.3
FDPS-204ENST00000461507 WWC3Q9ULE0 1092 aa16.9■□□□□ 0.3
FDPS-204ENST00000461507 A0A0G2JLW4 131 aa16.89■□□□□ 0.29
FDPS-204ENST00000461507 ZPR1O75312 459 aa16.89■□□□□ 0.29
FDPS-204ENST00000461507 FCHSD2O94868 740 aa16.89■□□□□ 0.29
FDPS-204ENST00000461507 NEFMP07197 916 aa16.89■□□□□ 0.29
FDPS-204ENST00000461507 KCNA3P22001 575 aa16.89■□□□□ 0.29
FDPS-204ENST00000461507 BCL2L12Q9HB09 334 aa16.89■□□□□ 0.29
FDPS-204ENST00000461507 DLG5Q8TDM6 1919 aa16.89■□□□□ 0.29
FDPS-204ENST00000461507 STARD3NLO95772 234 aa16.88■□□□□ 0.29
FDPS-204ENST00000461507 EIF5P55010 431 aaKnown RBP16.88■□□□□ 0.29
FDPS-204ENST00000461507 TEX13AQ9BXU3 409 aaPredicted RBP16.88■□□□□ 0.29
FDPS-204ENST00000461507 BCS1LQ9Y276 419 aa16.87■□□□□ 0.29
FDPS-204ENST00000461507 LAMB4A4D0S4 1761 aa16.87■□□□□ 0.29
FDPS-204ENST00000461507 ANKRD31Q8N7Z5 1873 aa16.86■□□□□ 0.29
FDPS-204ENST00000461507 NFIXQ14938 502 aa16.86■□□□□ 0.29
FDPS-204ENST00000461507 FMNL2Q96PY5 1086 aa16.86■□□□□ 0.29
FDPS-204ENST00000461507 PRKRIP1Q9H875 184 aaPredicted RBP16.86■□□□□ 0.29
FDPS-204ENST00000461507 KDM3BQ7LBC6 1761 aa16.86■□□□□ 0.29
FDPS-204ENST00000461507 A0A087WZG4 1122 aa16.85■□□□□ 0.29
FDPS-204ENST00000461507 HTATSF1O43719 755 aaKnown RBP16.85■□□□□ 0.29
FDPS-204ENST00000461507 PIM2Q9P1W9 311 aa16.85■□□□□ 0.29
FDPS-204ENST00000461507 SBF1O95248 1867 aa16.84■□□□□ 0.29
FDPS-204ENST00000461507 ANP32CO43423 234 aa16.84■□□□□ 0.29
FDPS-204ENST00000461507 CANXP27824 592 aaKnown RBP16.84■□□□□ 0.29
FDPS-204ENST00000461507 IL6STP40189 918 aaPredicted RBP16.84■□□□□ 0.29
FDPS-204ENST00000461507 WDR43Q15061 677 aaKnown RBP eCLIP16.84■□□□□ 0.293e-7■■■■□ 25.4
FDPS-204ENST00000461507 GPBP1L1Q9HC44 474 aaPredicted RBP16.84■□□□□ 0.29
FDPS-204ENST00000461507 BTBD11A6QL63 1104 aa16.83■□□□□ 0.28
FDPS-204ENST00000461507 COL11A2P13942 1736 aaPredicted RBP16.83■□□□□ 0.28
FDPS-204ENST00000461507 CARMIL3Q8ND23 1372 aa16.82■□□□□ 0.28
FDPS-204ENST00000461507 MAPK8IP3Q9UPT6 1336 aa16.82■□□□□ 0.28
FDPS-204ENST00000461507 KCNQ3O43525 872 aa16.82■□□□□ 0.28
FDPS-204ENST00000461507 DALRD3Q5D0E6 543 aaKnown RBP16.82■□□□□ 0.28
FDPS-204ENST00000461507 SENP3-EIF4A1A0A087X0R7 540 aa16.81■□□□□ 0.28
FDPS-204ENST00000461507 SERPINB2P05120 415 aa16.81■□□□□ 0.28
FDPS-204ENST00000461507 CHRNA5P30532 468 aa16.81■□□□□ 0.28
FDPS-204ENST00000461507 MCM10Q7L590 875 aa16.8■□□□□ 0.28
FDPS-204ENST00000461507 RTF1Q92541 710 aaKnown RBP16.8■□□□□ 0.28
FDPS-204ENST00000461507 ARFGEF2Q9Y6D5 1785 aa16.79■□□□□ 0.28
FDPS-204ENST00000461507 ARHGAP27Q6ZUM4 889 aa16.79■□□□□ 0.28
FDPS-204ENST00000461507 PLEKHF1Q96S99 279 aa16.79■□□□□ 0.28
FDPS-204ENST00000461507 PNNQ9H307 717 aaKnown RBP16.79■□□□□ 0.28
FDPS-204ENST00000461507 KIF3CO14782 793 aa16.78■□□□□ 0.28
FDPS-204ENST00000461507 CAMTA2O94983 1202 aa16.78■□□□□ 0.28
FDPS-204ENST00000461507 A1BGP04217 495 aa16.78■□□□□ 0.28
FDPS-204ENST00000461507 RGL2O15211 777 aa16.77■□□□□ 0.28
FDPS-204ENST00000461507 SNRPA1P09661 255 aaKnown RBP16.77■□□□□ 0.28
FDPS-204ENST00000461507 TBC1D9BQ66K14 1250 aa16.77■□□□□ 0.28
FDPS-204ENST00000461507 ZNF526Q8TF50 670 aaPredicted RBP16.77■□□□□ 0.28
FDPS-204ENST00000461507 USP16Q9Y5T5 823 aa16.77■□□□□ 0.28
FDPS-204ENST00000461507 TNRC6CQ9HCJ0 1690 aaKnown RBP16.77■□□□□ 0.28
FDPS-204ENST00000461507 DCTN1Q14203 1278 aa16.76■□□□□ 0.27
FDPS-204ENST00000461507 CCDC146Q8IYE0 955 aa16.76■□□□□ 0.27
FDPS-204ENST00000461507 PDZRN3Q9UPQ7 1066 aa16.76■□□□□ 0.27
FDPS-204ENST00000461507 TBC1D2BQ9UPU7 963 aa16.76■□□□□ 0.27
FDPS-204ENST00000461507 TIAM2Q8IVF5 1701 aa16.76■□□□□ 0.27
FDPS-204ENST00000461507 PRAMEF22A3QJZ6 481 aa16.75■□□□□ 0.27
FDPS-204ENST00000461507 TAF7Q15545 349 aaPredicted RBP16.75■□□□□ 0.27
FDPS-204ENST00000461507 C9orf131Q5VYM1 1079 aa16.75■□□□□ 0.27
FDPS-204ENST00000461507 PRR5LQ6MZQ0 368 aa16.75■□□□□ 0.27
FDPS-204ENST00000461507 FER1L6Q2WGJ9 1857 aa16.75■□□□□ 0.27
FDPS-204ENST00000461507 ZC3H4Q9UPT8 1303 aaKnown RBP16.74■□□□□ 0.27
FDPS-204ENST00000461507 NFE2L2Q16236 605 aa16.74■□□□□ 0.27
FDPS-204ENST00000461507 DZIP3Q86Y13 1208 aaKnown RBP16.74■□□□□ 0.27
FDPS-204ENST00000461507 CCDC88AQ3V6T2 1871 aa16.73■□□□□ 0.27
FDPS-204ENST00000461507 DICER1Q9UPY3 1922 aaKnown RBP16.73■□□□□ 0.27
FDPS-204ENST00000461507 NBPF26B4DH59 902 aa16.73■□□□□ 0.27
FDPS-204ENST00000461507 NBPF10Q6P3W6 841 aaKnown RBP16.73■□□□□ 0.27
FDPS-204ENST00000461507 CLEC4GQ6UXB4 293 aa16.73■□□□□ 0.27
FDPS-204ENST00000461507 BICDL1Q6ZP65 573 aa16.73■□□□□ 0.27
FDPS-204ENST00000461507 C2CD5Q86YS7 1000 aa16.73■□□□□ 0.27
FDPS-204ENST00000461507 NBPF15Q8N660 670 aa16.73■□□□□ 0.27
FDPS-204ENST00000461507 TTLL6Q8N841 843 aa16.73■□□□□ 0.27
FDPS-204ENST00000461507 PNISRQ8TF01 805 aaKnown RBP16.73■□□□□ 0.27
FDPS-204ENST00000461507 BRIP1Q9BX63 1249 aa16.73■□□□□ 0.27
FDPS-204ENST00000461507 MRS2Q9HD23 443 aa16.73■□□□□ 0.27
FDPS-204ENST00000461507 ZNF330Q9Y3S2 320 aaPredicted RBP16.73■□□□□ 0.27
FDPS-204ENST00000461507 H0YIN7 160 aa16.72■□□□□ 0.27
FDPS-204ENST00000461507 NPM2Q86SE8 214 aaKnown RBP16.72■□□□□ 0.27
FDPS-204ENST00000461507 CACNA1SQ13698 1873 aa16.71■□□□□ 0.27
FDPS-204ENST00000461507 HSPA6P17066 643 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms