RNA–Protein interactions for RNA: ENST00000460227.4

MECP2-206, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-206ENST00000460227 TRMT2AQ8IZ69 625 aaKnown RBP16.67■□□□□ 0.26
MECP2-206ENST00000460227 C8orf58Q8NAV2 365 aa16.67■□□□□ 0.26
MECP2-206ENST00000460227 TFCP2L1Q9NZI6 479 aa16.67■□□□□ 0.26
MECP2-206ENST00000460227 E9PSI1 815 aa16.66■□□□□ 0.26
MECP2-206ENST00000460227 LY75O60449 1722 aa16.66■□□□□ 0.26
MECP2-206ENST00000460227 A1BGP04217 495 aa16.66■□□□□ 0.26
MECP2-206ENST00000460227 R3HDM1Q15032 1099 aaKnown RBP16.66■□□□□ 0.26
MECP2-206ENST00000460227 DUSP27Q5VZP5 1158 aa16.66■□□□□ 0.26
MECP2-206ENST00000460227 AMIGO3Q86WK7 504 aa16.66■□□□□ 0.26
MECP2-206ENST00000460227 CDCA7LQ96GN5 454 aa16.66■□□□□ 0.26
MECP2-206ENST00000460227 AK7Q96M32 723 aa16.66■□□□□ 0.26
MECP2-206ENST00000460227 MYH16Q9H6N6 1097 aa16.66■□□□□ 0.26
MECP2-206ENST00000460227 CCDC87Q9NVE4 849 aa16.66■□□□□ 0.26
MECP2-206ENST00000460227 HOXB7P09629 217 aa16.65■□□□□ 0.26
MECP2-206ENST00000460227 SMIM5Q71RC9 77 aa16.65■□□□□ 0.26
MECP2-206ENST00000460227 RTCBQ9Y3I0 505 aaKnown RBP16.65■□□□□ 0.26
MECP2-206ENST00000460227 PAPPAQ13219 1627 aa16.65■□□□□ 0.26
MECP2-206ENST00000460227 FANCIQ9NVI1 1328 aa16.65■□□□□ 0.26
MECP2-206ENST00000460227 GNPATO15228 680 aa16.64■□□□□ 0.25
MECP2-206ENST00000460227 TSPYL6Q8N831 410 aa16.64■□□□□ 0.25
MECP2-206ENST00000460227 FLAD1Q8NFF5 587 aa16.64■□□□□ 0.25
MECP2-206ENST00000460227 ZBTB1Q9Y2K1 713 aa16.64■□□□□ 0.25
MECP2-206ENST00000460227 PSDA5PKW4 1024 aaPredicted RBP16.63■□□□□ 0.25
MECP2-206ENST00000460227 NBPF26B4DH59 902 aa16.63■□□□□ 0.25
MECP2-206ENST00000460227 ELL2O00472 640 aaPredicted RBP16.63■□□□□ 0.25
MECP2-206ENST00000460227 SSFA2P28290 1259 aa16.63■□□□□ 0.25
MECP2-206ENST00000460227 EIF5P55010 431 aaKnown RBP16.63■□□□□ 0.25
MECP2-206ENST00000460227 TRAPPC3LQ5T215 181 aa16.63■□□□□ 0.25
MECP2-206ENST00000460227 NBPF10Q6P3W6 841 aaKnown RBP16.63■□□□□ 0.25
MECP2-206ENST00000460227 COL23A1Q86Y22 540 aaPredicted RBP16.63■□□□□ 0.25
MECP2-206ENST00000460227 NBPF15Q8N660 670 aa16.63■□□□□ 0.25
MECP2-206ENST00000460227 PNPLA7Q6ZV29 1317 aa16.63■□□□□ 0.25
MECP2-206ENST00000460227 ZNF831Q5JPB2 1677 aa16.62■□□□□ 0.25
MECP2-206ENST00000460227 RREB1Q92766 1687 aa16.62■□□□□ 0.25
MECP2-206ENST00000460227 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.62■□□□□ 0.25
MECP2-206ENST00000460227 VAMP4O75379 141 aa16.62■□□□□ 0.25
MECP2-206ENST00000460227 EIF2S2P20042 333 aaKnown RBP16.62■□□□□ 0.25
MECP2-206ENST00000460227 CANXP27824 592 aaKnown RBP16.62■□□□□ 0.25
MECP2-206ENST00000460227 EXOSC9Q06265 439 aaKnown RBP16.62■□□□□ 0.25
MECP2-206ENST00000460227 ARHGEF1Q92888 912 aaKnown RBP16.62■□□□□ 0.25
MECP2-206ENST00000460227 PDGFDQ9GZP0 370 aaPredicted RBP16.62■□□□□ 0.25
MECP2-206ENST00000460227 SOS1Q07889 1333 aaPredicted RBP16.62■□□□□ 0.25
MECP2-206ENST00000460227 IL6STP40189 918 aaPredicted RBP16.61■□□□□ 0.25
MECP2-206ENST00000460227 PDIA6Q15084 440 aa16.61■□□□□ 0.25
MECP2-206ENST00000460227 ZBED9Q6R2W3 1325 aa16.61■□□□□ 0.25
MECP2-206ENST00000460227 UBR2Q8IWV8 1755 aa16.6■□□□□ 0.25
MECP2-206ENST00000460227 TWISTNBQ3B726 338 aaPredicted RBP16.6■□□□□ 0.25
MECP2-206ENST00000460227 CHMP4AQ9BY43 222 aa16.6■□□□□ 0.25
MECP2-206ENST00000460227 VIRMAQ69YN4 1812 aaKnown RBP16.6■□□□□ 0.25
MECP2-206ENST00000460227 ERBB4Q15303 1308 aa16.6■□□□□ 0.25
MECP2-206ENST00000460227 PHF14O94880 888 aa16.59■□□□□ 0.25
MECP2-206ENST00000460227 PIP4K2AP48426 406 aaPredicted RBP16.59■□□□□ 0.25
MECP2-206ENST00000460227 HDGFL1Q5TGJ6 251 aa16.59■□□□□ 0.25
MECP2-206ENST00000460227 LRP10Q7Z4F1 713 aa16.59■□□□□ 0.25
MECP2-206ENST00000460227 NECTIN2Q92692 538 aa16.59■□□□□ 0.25
MECP2-206ENST00000460227 NUP188Q5SRE5 1749 aa16.59■□□□□ 0.25
MECP2-206ENST00000460227 KDM3BQ7LBC6 1761 aa16.59■□□□□ 0.25
MECP2-206ENST00000460227 SLC16A10Q8TF71 515 aa16.58■□□□□ 0.24
MECP2-206ENST00000460227 DDX21Q9NR30 783 aaKnown RBP eCLIP16.58■□□□□ 0.24
MECP2-206ENST00000460227 C4BP0C0L5 1744 aa16.57■□□□□ 0.24
MECP2-206ENST00000460227 A0A087WZG4 1122 aa16.57■□□□□ 0.24
MECP2-206ENST00000460227 RFC4P35249 363 aa16.57■□□□□ 0.24
MECP2-206ENST00000460227 C5P01031 1676 aa16.56■□□□□ 0.24
MECP2-206ENST00000460227 CICQ96RK0 1608 aaPredicted RBP16.56■□□□□ 0.24
MECP2-206ENST00000460227 PROSER3Q2NL68 480 aa16.56■□□□□ 0.24
MECP2-206ENST00000460227 CCDC30Q5VVM6 783 aa16.56■□□□□ 0.24
MECP2-206ENST00000460227 DBF4Q9UBU7 674 aaPredicted RBP16.56■□□□□ 0.24
MECP2-206ENST00000460227 NARFQ9UHQ1 456 aa16.56■□□□□ 0.24
MECP2-206ENST00000460227 TJP1Q07157 1748 aa16.56■□□□□ 0.24
MECP2-206ENST00000460227 ANXA1P04083 346 aa16.55■□□□□ 0.24
MECP2-206ENST00000460227 MYL6BP14649 208 aa16.55■□□□□ 0.24
MECP2-206ENST00000460227 CHPF2Q9P2E5 772 aa16.55■□□□□ 0.24
MECP2-206ENST00000460227 TBC1D2BQ9UPU7 963 aa16.55■□□□□ 0.24
MECP2-206ENST00000460227 NPM2Q86SE8 214 aaKnown RBP16.54■□□□□ 0.24
MECP2-206ENST00000460227 HYPKQ9NX55 129 aa16.54■□□□□ 0.24
MECP2-206ENST00000460227 SRP68Q9UHB9 627 aaKnown RBP16.54■□□□□ 0.24
MECP2-206ENST00000460227 ZPR1O75312 459 aa16.53■□□□□ 0.24
MECP2-206ENST00000460227 ZBTB7AO95365 584 aa16.53■□□□□ 0.24
MECP2-206ENST00000460227 GYS1P13807 737 aa16.53■□□□□ 0.24
MECP2-206ENST00000460227 USPL1Q5W0Q7 1092 aa16.53■□□□□ 0.24
MECP2-206ENST00000460227 COPS6Q7L5N1 327 aa16.53■□□□□ 0.24
MECP2-206ENST00000460227 DZIP3Q86Y13 1208 aaKnown RBP16.53■□□□□ 0.24
MECP2-206ENST00000460227 MTFR1LQ9H019 292 aa16.53■□□□□ 0.24
MECP2-206ENST00000460227 ZNF330Q9Y3S2 320 aaPredicted RBP16.53■□□□□ 0.24
MECP2-206ENST00000460227 COL15A1P39059 1388 aa16.52■□□□□ 0.24
MECP2-206ENST00000460227 TAF1LQ8IZX4 1826 aa16.52■□□□□ 0.24
MECP2-206ENST00000460227 USP42Q9H9J4 1324 aaKnown RBP16.52■□□□□ 0.24
MECP2-206ENST00000460227 MYH14Q7Z406 1995 aaKnown RBP16.52■□□□□ 0.24
MECP2-206ENST00000460227 CAMTA2O94983 1202 aa16.52■□□□□ 0.24
MECP2-206ENST00000460227 SLC4A2P04920 1241 aa16.52■□□□□ 0.24
MECP2-206ENST00000460227 CT47B1P0C2W7 299 aaPredicted RBP16.52■□□□□ 0.24
MECP2-206ENST00000460227 TTLL7Q6ZT98 887 aa16.52■□□□□ 0.24
MECP2-206ENST00000460227 NLGN1Q8N2Q7 840 aa16.52■□□□□ 0.24
MECP2-206ENST00000460227 BCL2L12Q9HB09 334 aa16.52■□□□□ 0.24
MECP2-206ENST00000460227 ATF5Q9Y2D1 282 aaPredicted RBP16.52■□□□□ 0.24
MECP2-206ENST00000460227 U3KPZ7 1027 aaPredicted RBP16.52■□□□□ 0.24
MECP2-206ENST00000460227 COL5A3P25940 1745 aaPredicted RBP16.51■□□□□ 0.23
MECP2-206ENST00000460227 ERVV-1B6SEH8 477 aa16.51■□□□□ 0.23
MECP2-206ENST00000460227 TCERG1O14776 1098 aaKnown RBP16.51■□□□□ 0.23
MECP2-206ENST00000460227 XAGE3Q8WTP9 111 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms