RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 KRT24Q2M2I5 525 aa16.75■□□□□ 0.27
COL18A1-206ENST00000459895 CFAP44Q96MT7 982 aa16.75■□□□□ 0.27
COL18A1-206ENST00000459895 BABAM1Q9NWV8 329 aa16.75■□□□□ 0.27
COL18A1-206ENST00000459895 ZBTB1Q9Y2K1 713 aa16.75■□□□□ 0.27
COL18A1-206ENST00000459895 COL15A1P39059 1388 aa16.75■□□□□ 0.27
COL18A1-206ENST00000459895 CCDC87Q9NVE4 849 aa16.74■□□□□ 0.27
COL18A1-206ENST00000459895 SOS1Q07889 1333 aaPredicted RBP16.73■□□□□ 0.27
COL18A1-206ENST00000459895 FANCIQ9NVI1 1328 aa16.73■□□□□ 0.27
COL18A1-206ENST00000459895 GNAI1P63096 354 aa16.73■□□□□ 0.27
COL18A1-206ENST00000459895 INTS5Q6P9B9 1019 aaKnown RBP16.73■□□□□ 0.27
COL18A1-206ENST00000459895 TSR2Q969E8 191 aaKnown RBP16.73■□□□□ 0.27
COL18A1-206ENST00000459895 IL16Q14005 1332 aa16.72■□□□□ 0.27
COL18A1-206ENST00000459895 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.72■□□□□ 0.27
COL18A1-206ENST00000459895 SNRPA1P09661 255 aaKnown RBP16.72■□□□□ 0.27
COL18A1-206ENST00000459895 SSFA2P28290 1259 aa16.72■□□□□ 0.27
COL18A1-206ENST00000459895 RC3H1Q5TC82 1133 aaKnown RBP16.72■□□□□ 0.27
COL18A1-206ENST00000459895 ANKRD36CQ5JPF3 1778 aa16.72■□□□□ 0.27
COL18A1-206ENST00000459895 GIGYF1O75420 1035 aaPredicted RBP16.71■□□□□ 0.27
COL18A1-206ENST00000459895 PIP4K2AP48426 406 aaPredicted RBP16.71■□□□□ 0.27
COL18A1-206ENST00000459895 COL23A1Q86Y22 540 aaPredicted RBP16.71■□□□□ 0.27
COL18A1-206ENST00000459895 ARFGEF2Q9Y6D5 1785 aa16.71■□□□□ 0.27
COL18A1-206ENST00000459895 NGEFQ8N5V2 710 aa16.7■□□□□ 0.26
COL18A1-206ENST00000459895 SPINK5Q9NQ38 1064 aaPredicted RBP16.7■□□□□ 0.26
COL18A1-206ENST00000459895 USP16Q9Y5T5 823 aa16.7■□□□□ 0.26
COL18A1-206ENST00000459895 RPS6KA4O75676 772 aa16.69■□□□□ 0.26
COL18A1-206ENST00000459895 ZBTB7AO95365 584 aa16.69■□□□□ 0.26
COL18A1-206ENST00000459895 STARD3NLO95772 234 aa16.69■□□□□ 0.26
COL18A1-206ENST00000459895 WDR63Q8IWG1 891 aa16.69■□□□□ 0.26
COL18A1-206ENST00000459895 RTCBQ9Y3I0 505 aaKnown RBP16.69■□□□□ 0.26
COL18A1-206ENST00000459895 A1BGP04217 495 aa16.68■□□□□ 0.26
COL18A1-206ENST00000459895 HMGB2P26583 209 aaKnown RBP16.68■□□□□ 0.26
COL18A1-206ENST00000459895 CANXP27824 592 aaKnown RBP16.68■□□□□ 0.26
COL18A1-206ENST00000459895 TEX13AQ9BXU3 409 aaPredicted RBP16.68■□□□□ 0.26
COL18A1-206ENST00000459895 MSH5O43196 834 aa16.67■□□□□ 0.26
COL18A1-206ENST00000459895 ADRA2BP18089 450 aa16.67■□□□□ 0.26
COL18A1-206ENST00000459895 NRXN2Q9P2S2 1712 aa16.67■□□□□ 0.26
COL18A1-206ENST00000459895 USP42Q9H9J4 1324 aaKnown RBP16.67■□□□□ 0.26
COL18A1-206ENST00000459895 AFDNP55196 1824 aaKnown RBP16.66■□□□□ 0.26
COL18A1-206ENST00000459895 NBPF26B4DH59 902 aa16.66■□□□□ 0.26
COL18A1-206ENST00000459895 HNRNPUQ00839 825 aaKnown RBP eCLIP16.66■□□□□ 0.26
COL18A1-206ENST00000459895 MSL1Q68DK7 614 aa16.66■□□□□ 0.26
COL18A1-206ENST00000459895 NBPF10Q6P3W6 841 aaKnown RBP16.66■□□□□ 0.26
COL18A1-206ENST00000459895 NBPF15Q8N660 670 aa16.66■□□□□ 0.26
COL18A1-206ENST00000459895 ZNF330Q9Y3S2 320 aaPredicted RBP16.66■□□□□ 0.26
COL18A1-206ENST00000459895 SRCAPQ6ZRS2 3230 aa16.66■□□□□ 0.26
COL18A1-206ENST00000459895 NUP98P52948 1817 aa16.66■□□□□ 0.26
COL18A1-206ENST00000459895 KIAA1551Q9HCM1 1747 aa16.65■□□□□ 0.26
COL18A1-206ENST00000459895 HOXB7P09629 217 aa16.65■□□□□ 0.26
COL18A1-206ENST00000459895 DUSP27Q5VZP5 1158 aa16.65■□□□□ 0.26
COL18A1-206ENST00000459895 C8orf58Q8NAV2 365 aa16.65■□□□□ 0.26
COL18A1-206ENST00000459895 FLAD1Q8NFF5 587 aa16.65■□□□□ 0.26
COL18A1-206ENST00000459895 MTFR1LQ9H019 292 aa16.65■□□□□ 0.26
COL18A1-206ENST00000459895 SRP68Q9UHB9 627 aaKnown RBP16.65■□□□□ 0.26
COL18A1-206ENST00000459895 KIF13BQ9NQT8 1826 aa16.64■□□□□ 0.25
COL18A1-206ENST00000459895 IL6STP40189 918 aaPredicted RBP16.64■□□□□ 0.25
COL18A1-206ENST00000459895 EIF5P55010 431 aaKnown RBP16.64■□□□□ 0.25
COL18A1-206ENST00000459895 PROSER3Q2NL68 480 aa16.64■□□□□ 0.25
COL18A1-206ENST00000459895 HDGFL1Q5TGJ6 251 aa16.64■□□□□ 0.25
COL18A1-206ENST00000459895 TSPYL6Q8N831 410 aa16.64■□□□□ 0.25
COL18A1-206ENST00000459895 NECTIN2Q92692 538 aa16.64■□□□□ 0.25
COL18A1-206ENST00000459895 ARHGEF1Q92888 912 aaKnown RBP16.64■□□□□ 0.25
COL18A1-206ENST00000459895 ERBB4Q15303 1308 aa16.64■□□□□ 0.25
COL18A1-206ENST00000459895 EIF2S2P20042 333 aaKnown RBP16.63■□□□□ 0.25
COL18A1-206ENST00000459895 MYH16Q9H6N6 1097 aa16.63■□□□□ 0.25
COL18A1-206ENST00000459895 ANXA1P04083 346 aa16.62■□□□□ 0.25
COL18A1-206ENST00000459895 PTGER2P43116 358 aa16.62■□□□□ 0.25
COL18A1-206ENST00000459895 GOLGA2Q08379 1002 aa16.62■□□□□ 0.25
COL18A1-206ENST00000459895 TRAPPC3LQ5T215 181 aa16.62■□□□□ 0.25
COL18A1-206ENST00000459895 SGIP1Q9BQI5 828 aa16.62■□□□□ 0.25
COL18A1-206ENST00000459895 CHPF2Q9P2E5 772 aa16.62■□□□□ 0.25
COL18A1-206ENST00000459895 ATF5Q9Y2D1 282 aaPredicted RBP16.62■□□□□ 0.25
COL18A1-206ENST00000459895 ELL2O00472 640 aaPredicted RBP16.61■□□□□ 0.25
COL18A1-206ENST00000459895 GYS1P13807 737 aa16.61■□□□□ 0.25
COL18A1-206ENST00000459895 MYL6BP14649 208 aa16.61■□□□□ 0.25
COL18A1-206ENST00000459895 RFC4P35249 363 aa16.61■□□□□ 0.25
COL18A1-206ENST00000459895 PDIA6Q15084 440 aa16.61■□□□□ 0.25
COL18A1-206ENST00000459895 LRP10Q7Z4F1 713 aa16.61■□□□□ 0.25
COL18A1-206ENST00000459895 SLC16A10Q8TF71 515 aa16.61■□□□□ 0.25
COL18A1-206ENST00000459895 CDCA7LQ96GN5 454 aa16.61■□□□□ 0.25
COL18A1-206ENST00000459895 ZBED9Q6R2W3 1325 aa16.61■□□□□ 0.25
COL18A1-206ENST00000459895 COL11A2P13942 1736 aaPredicted RBP16.61■□□□□ 0.25
COL18A1-206ENST00000459895 E9PSI1 815 aa16.6■□□□□ 0.25
COL18A1-206ENST00000459895 EXOSC9Q06265 439 aaKnown RBP16.6■□□□□ 0.25
COL18A1-206ENST00000459895 TWISTNBQ3B726 338 aaPredicted RBP16.6■□□□□ 0.25
COL18A1-206ENST00000459895 USPL1Q5W0Q7 1092 aa16.6■□□□□ 0.25
COL18A1-206ENST00000459895 SPON1Q9HCB6 807 aa16.6■□□□□ 0.25
COL18A1-206ENST00000459895 ANKRD31Q8N7Z5 1873 aa16.6■□□□□ 0.25
COL18A1-206ENST00000459895 CACNA1FO60840 1977 aa16.6■□□□□ 0.25
COL18A1-206ENST00000459895 TNRC6CQ9HCJ0 1690 aaKnown RBP16.59■□□□□ 0.25
COL18A1-206ENST00000459895 N4BP2Q86UW6 1770 aaPredicted RBP16.59■□□□□ 0.25
COL18A1-206ENST00000459895 DZIP3Q86Y13 1208 aaKnown RBP16.59■□□□□ 0.25
COL18A1-206ENST00000459895 BCL2L12Q9HB09 334 aa16.59■□□□□ 0.25
COL18A1-206ENST00000459895 NARFQ9UHQ1 456 aa16.59■□□□□ 0.25
COL18A1-206ENST00000459895 DLEC1Q9Y238 1755 aa16.59■□□□□ 0.25
COL18A1-206ENST00000459895 A0A087WZG4 1122 aa16.58■□□□□ 0.24
COL18A1-206ENST00000459895 CAMTA2O94983 1202 aa16.58■□□□□ 0.24
COL18A1-206ENST00000459895 SLFN5Q08AF3 891 aa16.58■□□□□ 0.24
COL18A1-206ENST00000459895 FKBP8Q14318 412 aa16.58■□□□□ 0.24
COL18A1-206ENST00000459895 TBC1D2BQ9UPU7 963 aa16.58■□□□□ 0.24
COL18A1-206ENST00000459895 C10orf71Q711Q0 1435 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms