RNA–Protein interactions for RNA: ENST00000459628.5

GPHN-202, Transcript of gephyrin, humanhuman

TSL 2 BASIC

Gene GPHN, Length 1,723 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-202ENST00000459628 C8orf58Q8NAV2 365 aa16.45■□□□□ 0.22
GPHN-202ENST00000459628 SOCS7O14512 581 aa16.45■□□□□ 0.22
GPHN-202ENST00000459628 VSIG10Q8N0Z9 540 aa16.45■□□□□ 0.22
GPHN-202ENST00000459628 NECTIN2Q92692 538 aa16.45■□□□□ 0.22
GPHN-202ENST00000459628 GIGYF1O75420 1035 aaPredicted RBP16.44■□□□□ 0.22
GPHN-202ENST00000459628 DUSP27Q5VZP5 1158 aa16.44■□□□□ 0.22
GPHN-202ENST00000459628 TSPYL6Q8N831 410 aa16.44■□□□□ 0.22
GPHN-202ENST00000459628 EIF2S2P20042 333 aaKnown RBP16.43■□□□□ 0.22
GPHN-202ENST00000459628 USP16Q9Y5T5 823 aa16.43■□□□□ 0.22
GPHN-202ENST00000459628 UBR3Q6ZT12 1888 aa16.42■□□□□ 0.22
GPHN-202ENST00000459628 PIP4K2AP48426 406 aaPredicted RBP16.42■□□□□ 0.22
GPHN-202ENST00000459628 STARD3NLO95772 234 aa16.41■□□□□ 0.22
GPHN-202ENST00000459628 CYP19A1P11511 503 aaPredicted RBP16.41■□□□□ 0.22
GPHN-202ENST00000459628 CRKLP46109 303 aaKnown RBP16.41■□□□□ 0.22
GPHN-202ENST00000459628 TWISTNBQ3B726 338 aaPredicted RBP16.41■□□□□ 0.22
GPHN-202ENST00000459628 TEX13AQ9BXU3 409 aaPredicted RBP16.41■□□□□ 0.22
GPHN-202ENST00000459628 ANO8Q9HCE9 1232 aaPredicted RBP16.41■□□□□ 0.22
GPHN-202ENST00000459628 A1BGP04217 495 aa16.4■□□□□ 0.22
GPHN-202ENST00000459628 ZNF827Q17R98 1081 aa16.4■□□□□ 0.22
GPHN-202ENST00000459628 TRMT2AQ8IZ69 625 aaKnown RBP16.4■□□□□ 0.22
GPHN-202ENST00000459628 AK7Q96M32 723 aa16.4■□□□□ 0.22
GPHN-202ENST00000459628 HDGFL1Q5TGJ6 251 aa16.39■□□□□ 0.21
GPHN-202ENST00000459628 SMIM5Q71RC9 77 aa16.39■□□□□ 0.21
GPHN-202ENST00000459628 CCDC87Q9NVE4 849 aa16.39■□□□□ 0.21
GPHN-202ENST00000459628 TCERG1O14776 1098 aaKnown RBP16.39■□□□□ 0.21
GPHN-202ENST00000459628 GNPATO15228 680 aa16.39■□□□□ 0.21
GPHN-202ENST00000459628 CANXP27824 592 aaKnown RBP16.39■□□□□ 0.21
GPHN-202ENST00000459628 ZBTB1Q9Y2K1 713 aa16.39■□□□□ 0.21
GPHN-202ENST00000459628 ZNF330Q9Y3S2 320 aaPredicted RBP16.39■□□□□ 0.21
GPHN-202ENST00000459628 CNTNAP4Q9C0A0 1308 aa16.38■□□□□ 0.21
GPHN-202ENST00000459628 PHF14O94880 888 aa16.38■□□□□ 0.21
GPHN-202ENST00000459628 INTS5Q6P9B9 1019 aaKnown RBP16.38■□□□□ 0.21
GPHN-202ENST00000459628 STK32BQ9NY57 414 aa16.38■□□□□ 0.21
GPHN-202ENST00000459628 C4AP0C0L4 1744 aa16.37■□□□□ 0.21
GPHN-202ENST00000459628 HOXB7P09629 217 aa16.37■□□□□ 0.21
GPHN-202ENST00000459628 TFCP2L1Q9NZI6 479 aa16.37■□□□□ 0.21
GPHN-202ENST00000459628 QSER1Q2KHR3 1735 aa16.37■□□□□ 0.21
GPHN-202ENST00000459628 ANXA1P04083 346 aa16.36■□□□□ 0.21
GPHN-202ENST00000459628 MYL6BP14649 208 aa16.36■□□□□ 0.21
GPHN-202ENST00000459628 NBPF14Q5TI25 921 aa16.36■□□□□ 0.21
GPHN-202ENST00000459628 AMIGO3Q86WK7 504 aa16.36■□□□□ 0.21
GPHN-202ENST00000459628 AKT1S1Q96B36 256 aa16.36■□□□□ 0.21
GPHN-202ENST00000459628 VAMP4O75379 141 aa16.36■□□□□ 0.21
GPHN-202ENST00000459628 RNF216Q9NWF9 866 aaPredicted RBP16.36■□□□□ 0.21
GPHN-202ENST00000459628 CHPF2Q9P2E5 772 aa16.36■□□□□ 0.21
GPHN-202ENST00000459628 NBPF26B4DH59 902 aa16.35■□□□□ 0.21
GPHN-202ENST00000459628 SLC15A2Q16348 729 aa16.35■□□□□ 0.21
GPHN-202ENST00000459628 PROSER3Q2NL68 480 aa16.35■□□□□ 0.21
GPHN-202ENST00000459628 RC3H1Q5TC82 1133 aaKnown RBP16.35■□□□□ 0.21
GPHN-202ENST00000459628 NBPF10Q6P3W6 841 aaKnown RBP16.35■□□□□ 0.21
GPHN-202ENST00000459628 NBPF15Q8N660 670 aa16.35■□□□□ 0.21
GPHN-202ENST00000459628 CACNA1FO60840 1977 aa16.34■□□□□ 0.21
GPHN-202ENST00000459628 RTCBQ9Y3I0 505 aaKnown RBP16.34■□□□□ 0.21
GPHN-202ENST00000459628 SOS1Q07889 1333 aaPredicted RBP16.34■□□□□ 0.21
GPHN-202ENST00000459628 HMGB2P26583 209 aaKnown RBP16.33■□□□□ 0.21
GPHN-202ENST00000459628 CCDC30Q5VVM6 783 aa16.33■□□□□ 0.21
GPHN-202ENST00000459628 ARXQ96QS3 562 aa16.33■□□□□ 0.21
GPHN-202ENST00000459628 COL15A1P39059 1388 aa16.33■□□□□ 0.21
GPHN-202ENST00000459628 PSDA5PKW4 1024 aaPredicted RBP16.33■□□□□ 0.2
GPHN-202ENST00000459628 RPS6KA4O75676 772 aa16.33■□□□□ 0.2
GPHN-202ENST00000459628 R3HDM1Q15032 1099 aaKnown RBP16.33■□□□□ 0.2
GPHN-202ENST00000459628 STK31Q9BXU1 1019 aa16.33■□□□□ 0.2
GPHN-202ENST00000459628 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.32■□□□□ 0.2
GPHN-202ENST00000459628 PDIA6Q15084 440 aa16.32■□□□□ 0.2
GPHN-202ENST00000459628 BCL2L13Q9BXK5 485 aa16.32■□□□□ 0.2
GPHN-202ENST00000459628 ERBB4Q15303 1308 aa16.32■□□□□ 0.2
GPHN-202ENST00000459628 NPM2Q86SE8 214 aaKnown RBP16.31■□□□□ 0.2
GPHN-202ENST00000459628 DDX21Q9NR30 783 aaKnown RBP eCLIP16.31■□□□□ 0.2
GPHN-202ENST00000459628 DBF4Q9UBU7 674 aaPredicted RBP16.31■□□□□ 0.2
GPHN-202ENST00000459628 PNPLA7Q6ZV29 1317 aa16.31■□□□□ 0.2
GPHN-202ENST00000459628 IL6STP40189 918 aaPredicted RBP16.31■□□□□ 0.2
GPHN-202ENST00000459628 AIMP1Q12904 312 aaKnown RBP16.31■□□□□ 0.2
GPHN-202ENST00000459628 POTEDQ86YR6 584 aa16.31■□□□□ 0.2
GPHN-202ENST00000459628 BCORQ6W2J9 1755 aa16.3■□□□□ 0.2
GPHN-202ENST00000459628 SCN7AQ01118 1682 aa16.3■□□□□ 0.2
GPHN-202ENST00000459628 SSFA2P28290 1259 aa16.3■□□□□ 0.2
GPHN-202ENST00000459628 EIF5P55010 431 aaKnown RBP16.3■□□□□ 0.2
GPHN-202ENST00000459628 CASZ1Q86V15 1759 aa16.29■□□□□ 0.2
GPHN-202ENST00000459628 SLC4A2P04920 1241 aa16.29■□□□□ 0.2
GPHN-202ENST00000459628 TRAPPC3LQ5T215 181 aa16.29■□□□□ 0.2
GPHN-202ENST00000459628 COL23A1Q86Y22 540 aaPredicted RBP16.29■□□□□ 0.2
GPHN-202ENST00000459628 ARHGEF1Q92888 912 aaKnown RBP16.29■□□□□ 0.2
GPHN-202ENST00000459628 CHMP4AQ9BY43 222 aa16.29■□□□□ 0.2
GPHN-202ENST00000459628 PDGFDQ9GZP0 370 aaPredicted RBP16.29■□□□□ 0.2
GPHN-202ENST00000459628 PHAXQ9H814 394 aaKnown RBP16.29■□□□□ 0.2
GPHN-202ENST00000459628 TBC1D2BQ9UPU7 963 aa16.29■□□□□ 0.2
GPHN-202ENST00000459628 CT47B1P0C2W7 299 aaPredicted RBP16.28■□□□□ 0.2
GPHN-202ENST00000459628 XAGE3Q8WTP9 111 aa16.28■□□□□ 0.2
GPHN-202ENST00000459628 SSH1Q8WYL5 1049 aa16.28■□□□□ 0.2
GPHN-202ENST00000459628 SMC4Q9NTJ3 1288 aa16.28■□□□□ 0.2
GPHN-202ENST00000459628 SRP68Q9UHB9 627 aaKnown RBP16.28■□□□□ 0.2
GPHN-202ENST00000459628 ARFGEF2Q9Y6D5 1785 aa16.28■□□□□ 0.2
GPHN-202ENST00000459628 NUP98P52948 1817 aa16.28■□□□□ 0.2
GPHN-202ENST00000459628 HOXD11P31277 338 aaPredicted RBP16.28■□□□□ 0.2
GPHN-202ENST00000459628 RFC4P35249 363 aa16.28■□□□□ 0.2
GPHN-202ENST00000459628 TTLL7Q6ZT98 887 aa16.28■□□□□ 0.2
GPHN-202ENST00000459628 LRP10Q7Z4F1 713 aa16.28■□□□□ 0.2
GPHN-202ENST00000459628 DZIP3Q86Y13 1208 aaKnown RBP16.28■□□□□ 0.2
GPHN-202ENST00000459628 HYPKQ9NX55 129 aa16.28■□□□□ 0.2
GPHN-202ENST00000459628 COPS6Q7L5N1 327 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms