RNA–Protein interactions for RNA: ENST00000457408.6

TMED4-203, Transcript of transmembrane p24 trafficking protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED4, Length 2,322 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-203ENST00000457408 BTG4Q9NY30 223 aa25.46■■□□□ 1.67
TMED4-203ENST00000457408 ATP8B2P98198 1209 aa25.46■■□□□ 1.67
TMED4-203ENST00000457408 CARD10Q9BWT7 1032 aa25.46■■□□□ 1.67
TMED4-203ENST00000457408 HYPKQ9NX55 129 aa25.45■■□□□ 1.66
TMED4-203ENST00000457408 ADAMTS7Q9UKP4 1686 aa25.45■■□□□ 1.66
TMED4-203ENST00000457408 USP16Q9Y5T5 823 aa25.45■■□□□ 1.66
TMED4-203ENST00000457408 PCDH11XQ9BZA7 1347 aa25.44■■□□□ 1.66
TMED4-203ENST00000457408 PCDH11YQ9BZA8 1340 aa25.44■■□□□ 1.66
TMED4-203ENST00000457408 TBC1D32Q96NH3 1257 aa25.44■■□□□ 1.66
TMED4-203ENST00000457408 PXDNLA1KZ92 1463 aa25.44■■□□□ 1.66
TMED4-203ENST00000457408 DDX21Q9NR30 783 aaKnown RBP eCLIP25.43■■□□□ 1.66
TMED4-203ENST00000457408 NHSL1Q5SYE7 1610 aa25.43■■□□□ 1.66
TMED4-203ENST00000457408 PDIA6Q15084 440 aa25.43■■□□□ 1.66
TMED4-203ENST00000457408 KSR2Q6VAB6 950 aa25.43■■□□□ 1.66
TMED4-203ENST00000457408 CWF19L2Q2TBE0 894 aaKnown RBP25.42■■□□□ 1.66
TMED4-203ENST00000457408 ABCA3Q99758 1704 aa25.42■■□□□ 1.66
TMED4-203ENST00000457408 GSPT1P15170 499 aaKnown RBP25.41■■□□□ 1.66
TMED4-203ENST00000457408 FMNL2Q96PY5 1086 aa25.41■■□□□ 1.66
TMED4-203ENST00000457408 C22orf23Q9BZE7 217 aa25.41■■□□□ 1.66
TMED4-203ENST00000457408 SNRPA1P09661 255 aaKnown RBP25.41■■□□□ 1.66
TMED4-203ENST00000457408 RTL5Q5HYW3 569 aaPredicted RBP25.41■■□□□ 1.66
TMED4-203ENST00000457408 C9orf78Q9NZ63 289 aaPredicted RBP25.41■■□□□ 1.66
TMED4-203ENST00000457408 PKD1L3Q7Z443 1732 aa25.4■■□□□ 1.66
TMED4-203ENST00000457408 PPP1R42Q7Z4L9 355 aa25.4■■□□□ 1.66
TMED4-203ENST00000457408 RIC3Q7Z5B4 369 aa25.39■■□□□ 1.66
TMED4-203ENST00000457408 DDX58O95786 925 aaKnown RBP25.38■■□□□ 1.65
TMED4-203ENST00000457408 XAGE3Q8WTP9 111 aa25.38■■□□□ 1.65
TMED4-203ENST00000457408 TTC22Q5TAA0 569 aa25.38■■□□□ 1.65
TMED4-203ENST00000457408 TBC1D9Q6ZT07 1266 aa25.38■■□□□ 1.65
TMED4-203ENST00000457408 SRGAP3O43295 1099 aa25.37■■□□□ 1.65
TMED4-203ENST00000457408 COPS6Q7L5N1 327 aa25.37■■□□□ 1.65
TMED4-203ENST00000457408 LRRCC1Q9C099 1032 aa25.37■■□□□ 1.65
TMED4-203ENST00000457408 ROBO1Q9Y6N7 1651 aa25.37■■□□□ 1.65
TMED4-203ENST00000457408 PTCD1O75127 700 aaKnown RBP25.36■■□□□ 1.65
TMED4-203ENST00000457408 TSHZ3Q63HK5 1081 aa25.36■■□□□ 1.65
TMED4-203ENST00000457408 C5P01031 1676 aa25.35■■□□□ 1.65
TMED4-203ENST00000457408 PARP4Q9UKK3 1724 aaKnown RBP25.35■■□□□ 1.65
TMED4-203ENST00000457408 SURF6O75683 361 aaKnown RBP25.35■■□□□ 1.65
TMED4-203ENST00000457408 PLEKHG2Q9H7P9 1386 aa25.34■■□□□ 1.65
TMED4-203ENST00000457408 SSH3Q8TE77 659 aa25.34■■□□□ 1.65
TMED4-203ENST00000457408 IL1RAPL2Q9NP60 686 aa25.34■■□□□ 1.65
TMED4-203ENST00000457408 MRC1P22897 1456 aa25.33■■□□□ 1.65
TMED4-203ENST00000457408 ADAMTS2O95450 1211 aa25.33■■□□□ 1.65
TMED4-203ENST00000457408 PIP4K2BP78356 416 aa25.33■■□□□ 1.65
TMED4-203ENST00000457408 N4BP2Q86UW6 1770 aaPredicted RBP25.32■■□□□ 1.64
TMED4-203ENST00000457408 ERVV-2B6SEH9 535 aa25.32■■□□□ 1.64
TMED4-203ENST00000457408 CDC45O75419 566 aa25.32■■□□□ 1.64
TMED4-203ENST00000457408 ALDH1L1O75891 902 aa25.32■■□□□ 1.64
TMED4-203ENST00000457408 LINS1Q8NG48 757 aa25.31■■□□□ 1.64
TMED4-203ENST00000457408 IBTKQ9P2D0 1353 aaPredicted RBP25.31■■□□□ 1.64
TMED4-203ENST00000457408 SDSP20132 328 aa25.31■■□□□ 1.64
TMED4-203ENST00000457408 PDE1AP54750 535 aa25.31■■□□□ 1.64
TMED4-203ENST00000457408 MYD88Q99836 296 aa25.31■■□□□ 1.64
TMED4-203ENST00000457408 BECN1Q14457 450 aa25.3■■□□□ 1.64
TMED4-203ENST00000457408 NEXNQ0ZGT2 675 aa25.3■■□□□ 1.64
TMED4-203ENST00000457408 ANKRD13DQ6ZTN6 518 aa25.3■■□□□ 1.64
TMED4-203ENST00000457408 IGKV5-2P06315 115 aa25.29■■□□□ 1.64
TMED4-203ENST00000457408 PRKCSHP14314 528 aaPredicted RBP25.29■■□□□ 1.64
TMED4-203ENST00000457408 NKX1-1Q15270 411 aaPredicted RBP25.29■■□□□ 1.64
TMED4-203ENST00000457408 NUTM2BA6NNL0 878 aaPredicted RBP25.28■■□□□ 1.64
TMED4-203ENST00000457408 NUTM2EB1AL46 878 aaPredicted RBP25.28■■□□□ 1.64
TMED4-203ENST00000457408 GRM8O00222 908 aa25.28■■□□□ 1.64
TMED4-203ENST00000457408 POLA2Q14181 598 aa25.28■■□□□ 1.64
TMED4-203ENST00000457408 NUTM2AQ8IVF1 878 aaPredicted RBP25.28■■□□□ 1.64
TMED4-203ENST00000457408 JARID2Q92833 1246 aaPredicted RBP25.28■■□□□ 1.64
TMED4-203ENST00000457408 OS9Q13438 667 aaPredicted RBP25.27■■□□□ 1.64
TMED4-203ENST00000457408 NUTM1Q86Y26 1132 aa25.27■■□□□ 1.64
TMED4-203ENST00000457408 TMOD3Q9NYL9 352 aa25.27■■□□□ 1.64
TMED4-203ENST00000457408 MX1P20591 662 aa25.26■■□□□ 1.63
TMED4-203ENST00000457408 A1BGP04217 495 aa25.26■■□□□ 1.63
TMED4-203ENST00000457408 SUCLG2Q96I99 432 aa25.26■■□□□ 1.63
TMED4-203ENST00000457408 LRP10Q7Z4F1 713 aa25.25■■□□□ 1.63
TMED4-203ENST00000457408 ATP5J2-PTCD1G3V325 749 aa25.25■■□□□ 1.63
TMED4-203ENST00000457408 SPRYD3Q8NCJ5 442 aa25.25■■□□□ 1.63
TMED4-203ENST00000457408 METTL22Q9BUU2 404 aaPredicted RBP25.25■■□□□ 1.63
TMED4-203ENST00000457408 RHPN1Q8TCX5 695 aa25.24■■□□□ 1.63
TMED4-203ENST00000457408 TBC1D2Q9BYX2 928 aa25.24■■□□□ 1.63
TMED4-203ENST00000457408 PA2G4Q9UQ80 394 aaKnown RBP25.24■■□□□ 1.63
TMED4-203ENST00000457408 LTBP4Q8N2S1 1624 aa25.24■■□□□ 1.63
TMED4-203ENST00000457408 NEURL1BA8MQ27 555 aa25.24■■□□□ 1.63
TMED4-203ENST00000457408 NBPF26B4DH59 902 aa25.24■■□□□ 1.63
TMED4-203ENST00000457408 NBPF14Q5TI25 921 aa25.24■■□□□ 1.63
TMED4-203ENST00000457408 NBPF10Q6P3W6 841 aaKnown RBP25.24■■□□□ 1.63
TMED4-203ENST00000457408 NBPF15Q8N660 670 aa25.24■■□□□ 1.63
TMED4-203ENST00000457408 BICC1Q9H694 974 aaKnown RBP25.24■■□□□ 1.63
TMED4-203ENST00000457408 KAT6BQ8WYB5 2073 aa25.23■■□□□ 1.63
TMED4-203ENST00000457408 ZNF330Q9Y3S2 320 aaPredicted RBP25.23■■□□□ 1.63
TMED4-203ENST00000457408 RAB11FIP3O75154 756 aa25.22■■□□□ 1.63
TMED4-203ENST00000457408 SLKQ9H2G2 1235 aaPredicted RBP25.22■■□□□ 1.63
TMED4-203ENST00000457408 OSBPL3Q9H4L5 887 aa25.22■■□□□ 1.63
TMED4-203ENST00000457408 TRIM6-TRIM34B2RNG4 842 aa25.21■■□□□ 1.63
TMED4-203ENST00000457408 GCKRQ14397 625 aa25.21■■□□□ 1.63
TMED4-203ENST00000457408 RILPL2Q969X0 211 aa25.21■■□□□ 1.63
TMED4-203ENST00000457408 SYTL4Q96C24 671 aaPredicted RBP25.21■■□□□ 1.63
TMED4-203ENST00000457408 KAZALD1Q96I82 304 aa25.21■■□□□ 1.63
TMED4-203ENST00000457408 ASAP1Q9ULH1 1129 aa25.21■■□□□ 1.63
TMED4-203ENST00000457408 CASC1Q6TDU7 716 aa25.21■■□□□ 1.63
TMED4-203ENST00000457408 PIGBQ92521 554 aa25.21■■□□□ 1.63
TMED4-203ENST00000457408 SHANK3Q9BYB0 1731 aa25.21■■□□□ 1.63
TMED4-203ENST00000457408 RBM25P49756 843 aaKnown RBP25.2■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms