RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 MYL6BP14649 208 aa16.52■□□□□ 0.23
TOP3B-213ENST00000457179 K7ELQ4 463 aaPredicted RBP16.51■□□□□ 0.23
TOP3B-213ENST00000457179 CADPS2Q86UW7 1296 aa16.51■□□□□ 0.23
TOP3B-213ENST00000457179 ZNF330Q9Y3S2 320 aaPredicted RBP16.51■□□□□ 0.23
TOP3B-213ENST00000457179 KDRP35968 1356 aa16.51■□□□□ 0.23
TOP3B-213ENST00000457179 RBM25P49756 843 aaKnown RBP16.51■□□□□ 0.23
TOP3B-213ENST00000457179 PRDM11Q9NQV5 511 aa16.51■□□□□ 0.23
TOP3B-213ENST00000457179 AK9Q5TCS8 1911 aa16.51■□□□□ 0.23
TOP3B-213ENST00000457179 PI4KAP2A4QPH2 592 aa16.51■□□□□ 0.23
TOP3B-213ENST00000457179 PI4KAP1Q8N8J0 262 aa16.51■□□□□ 0.23
TOP3B-213ENST00000457179 NFATC2IPQ8NCF5 419 aa16.51■□□□□ 0.23
TOP3B-213ENST00000457179 PIK3C2AO00443 1686 aa16.5■□□□□ 0.23
TOP3B-213ENST00000457179 HS1BP3Q53T59 392 aa16.5■□□□□ 0.23
TOP3B-213ENST00000457179 PPP4R3BQ5MIZ7 849 aa16.5■□□□□ 0.23
TOP3B-213ENST00000457179 IGSF3O75054 1194 aa16.5■□□□□ 0.23
TOP3B-213ENST00000457179 PLEKHM2Q8IWE5 1019 aa16.5■□□□□ 0.23
TOP3B-213ENST00000457179 DDX54Q8TDD1 881 aaKnown RBP16.5■□□□□ 0.23
TOP3B-213ENST00000457179 UTP14CQ5TAP6 766 aaKnown RBP16.49■□□□□ 0.23
TOP3B-213ENST00000457179 BCL11BQ9C0K0 894 aaPredicted RBP16.49■□□□□ 0.23
TOP3B-213ENST00000457179 LRRFIP2Q9Y608 721 aaKnown RBP16.49■□□□□ 0.23
TOP3B-213ENST00000457179 DLG5Q8TDM6 1919 aa16.49■□□□□ 0.23
TOP3B-213ENST00000457179 CEP85Q6P2H3 762 aa16.49■□□□□ 0.23
TOP3B-213ENST00000457179 IL1RAPL2Q9NP60 686 aa16.49■□□□□ 0.23
TOP3B-213ENST00000457179 GTF2E1P29083 439 aaPredicted RBP16.48■□□□□ 0.23
TOP3B-213ENST00000457179 ZNF445P59923 1031 aa16.48■□□□□ 0.23
TOP3B-213ENST00000457179 PROSER3Q2NL68 480 aa16.48■□□□□ 0.23
TOP3B-213ENST00000457179 INTS3Q68E01 1043 aaKnown RBP16.48■□□□□ 0.23
TOP3B-213ENST00000457179 TOM1L2Q6ZVM7 507 aa16.48■□□□□ 0.23
TOP3B-213ENST00000457179 KAT6BQ8WYB5 2073 aa16.47■□□□□ 0.23
TOP3B-213ENST00000457179 CDC45O75419 566 aa16.47■□□□□ 0.23
TOP3B-213ENST00000457179 PNMA6EA0A0J9YXQ4 647 aa16.47■□□□□ 0.23
TOP3B-213ENST00000457179 SPDYE4A6NLX3 237 aa16.47■□□□□ 0.23
TOP3B-213ENST00000457179 PRPF40AO75400 957 aaKnown RBP16.47■□□□□ 0.23
TOP3B-213ENST00000457179 CHAMP1Q96JM3 812 aa16.47■□□□□ 0.23
TOP3B-213ENST00000457179 PDLIM2Q96JY6 352 aa16.47■□□□□ 0.23
TOP3B-213ENST00000457179 KIF2CQ99661 725 aa16.47■□□□□ 0.23
TOP3B-213ENST00000457179 C1orf167Q5SNV9 1468 aa16.47■□□□□ 0.23
TOP3B-213ENST00000457179 DCTPP1Q9H773 170 aa16.47■□□□□ 0.23
TOP3B-213ENST00000457179 ERBB3P21860 1342 aa16.46■□□□□ 0.23
TOP3B-213ENST00000457179 SYCE3A1L190 88 aa16.46■□□□□ 0.23
TOP3B-213ENST00000457179 EIF4A1P60842 406 aaKnown RBP16.46■□□□□ 0.23
TOP3B-213ENST00000457179 PKP1Q13835 747 aa16.46■□□□□ 0.23
TOP3B-213ENST00000457179 AKAP4Q5JQC9 854 aa16.46■□□□□ 0.23
TOP3B-213ENST00000457179 FOXD4L5Q5VV16 416 aaPredicted RBP16.46■□□□□ 0.23
TOP3B-213ENST00000457179 FOXD4L4Q8WXT5 416 aaPredicted RBP16.46■□□□□ 0.23
TOP3B-213ENST00000457179 CCDC39Q9UFE4 941 aa16.46■□□□□ 0.23
TOP3B-213ENST00000457179 XRN1Q8IZH2 1706 aaKnown RBP16.46■□□□□ 0.23
TOP3B-213ENST00000457179 PTPRCP08575 1304 aa16.46■□□□□ 0.23
TOP3B-213ENST00000457179 NPHP3Q7Z494 1330 aa16.46■□□□□ 0.23
TOP3B-213ENST00000457179 NALCNQ8IZF0 1738 aa16.46■□□□□ 0.23
TOP3B-213ENST00000457179 KDM4FA0A1W2PPD8 638 aa16.46■□□□□ 0.23
TOP3B-213ENST00000457179 RNMTO43148 476 aaKnown RBP16.46■□□□□ 0.23
TOP3B-213ENST00000457179 GNAI2P04899 355 aa16.46■□□□□ 0.23
TOP3B-213ENST00000457179 UBTFL1P0CB47 393 aaPredicted RBP16.45■□□□□ 0.22
TOP3B-213ENST00000457179 ANKRD44Q8N8A2 993 aa16.45■□□□□ 0.22
TOP3B-213ENST00000457179 IBTKQ9P2D0 1353 aaPredicted RBP16.45■□□□□ 0.22
TOP3B-213ENST00000457179 TATP17735 454 aaPredicted RBP16.45■□□□□ 0.22
TOP3B-213ENST00000457179 CWF19L2Q2TBE0 894 aaKnown RBP16.45■□□□□ 0.22
TOP3B-213ENST00000457179 PTCD1O75127 700 aaKnown RBP16.44■□□□□ 0.22
TOP3B-213ENST00000457179 MAP4K4O95819 1239 aaPredicted RBP16.44■□□□□ 0.22
TOP3B-213ENST00000457179 NBPF7P0C2Y1 421 aaPredicted RBP16.44■□□□□ 0.22
TOP3B-213ENST00000457179 EVA1CP58658 441 aa16.44■□□□□ 0.22
TOP3B-213ENST00000457179 SLAIN2Q9P270 581 aa16.44■□□□□ 0.22
TOP3B-213ENST00000457179 KIAA0232Q92628 1395 aa16.44■□□□□ 0.22
TOP3B-213ENST00000457179 TOPAZ1Q8N9V7 1692 aa16.44■□□□□ 0.22
TOP3B-213ENST00000457179 NRKQ7Z2Y5 1582 aa16.44■□□□□ 0.22
TOP3B-213ENST00000457179 CCT4P50991 539 aaKnown RBP16.44■□□□□ 0.22
TOP3B-213ENST00000457179 BRINP3Q76B58 766 aa16.44■□□□□ 0.22
TOP3B-213ENST00000457179 OS9Q13438 667 aaPredicted RBP16.44■□□□□ 0.22
TOP3B-213ENST00000457179 VGLL3A8MV65 326 aa16.43■□□□□ 0.22
TOP3B-213ENST00000457179 KIAA2012Q0VF49 1180 aa16.43■□□□□ 0.22
TOP3B-213ENST00000457179 ATP2B3Q16720 1220 aa16.43■□□□□ 0.22
TOP3B-213ENST00000457179 TTC22Q5TAA0 569 aa16.43■□□□□ 0.22
TOP3B-213ENST00000457179 ZNF830Q96NB3 372 aaPredicted RBP16.43■□□□□ 0.22
TOP3B-213ENST00000457179 LMBRD1Q9NUN5 540 aa16.43■□□□□ 0.22
TOP3B-213ENST00000457179 RTL1A6NKG5 1358 aa16.43■□□□□ 0.22
TOP3B-213ENST00000457179 TRIM6-TRIM34B2RNG4 842 aa16.43■□□□□ 0.22
TOP3B-213ENST00000457179 SDSP20132 328 aa16.43■□□□□ 0.22
TOP3B-213ENST00000457179 AMOTQ4VCS5 1084 aa16.43■□□□□ 0.22
TOP3B-213ENST00000457179 RILPL2Q969X0 211 aa16.43■□□□□ 0.22
TOP3B-213ENST00000457179 HTATSF1O43719 755 aaKnown RBP16.42■□□□□ 0.22
TOP3B-213ENST00000457179 HMMRO75330 724 aa16.42■□□□□ 0.22
TOP3B-213ENST00000457179 SURF6O75683 361 aaKnown RBP16.42■□□□□ 0.22
TOP3B-213ENST00000457179 ZNF710Q8N1W2 664 aa16.42■□□□□ 0.22
TOP3B-213ENST00000457179 C9orf78Q9NZ63 289 aaPredicted RBP16.42■□□□□ 0.22
TOP3B-213ENST00000457179 RPAP2Q8IXW5 612 aaPredicted RBP16.42■□□□□ 0.22
TOP3B-213ENST00000457179 SRCIN1Q9C0H9 1055 aa16.42■□□□□ 0.22
TOP3B-213ENST00000457179 C17orf53Q8N3J3 647 aaPredicted RBP16.42■□□□□ 0.22
TOP3B-213ENST00000457179 MYRIPQ8NFW9 859 aa16.42■□□□□ 0.22
TOP3B-213ENST00000457179 NAP1L2Q9ULW6 460 aaPredicted RBP16.42■□□□□ 0.22
TOP3B-213ENST00000457179 SRGAP3O43295 1099 aa16.41■□□□□ 0.22
TOP3B-213ENST00000457179 USP44Q9H0E7 712 aa16.41■□□□□ 0.22
TOP3B-213ENST00000457179 CCDC9Q9Y3X0 531 aaKnown RBP16.41■□□□□ 0.22
TOP3B-213ENST00000457179 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.41■□□□□ 0.22
TOP3B-213ENST00000457179 NUTM1Q86Y26 1132 aa16.41■□□□□ 0.22
TOP3B-213ENST00000457179 GPT2Q8TD30 523 aa16.41■□□□□ 0.22
TOP3B-213ENST00000457179 MAP3K2Q9Y2U5 619 aa16.41■□□□□ 0.22
TOP3B-213ENST00000457179 MCM5P33992 734 aa16.4■□□□□ 0.22
TOP3B-213ENST00000457179 TTC5Q8N0Z6 440 aa16.4■□□□□ 0.22
TOP3B-213ENST00000457179 ADAMTSL3P82987 1691 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms