RNA–Protein interactions for RNA: ENST00000457047.6

CD58-203, Transcript of CD58 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD58, Length 1,328 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD58-203ENST00000457047 DDR1Q08345 913 aa27.79■■■□□ 2.04
CD58-203ENST00000457047 USPL1Q5W0Q7 1092 aa27.79■■■□□ 2.04
CD58-203ENST00000457047 DDX10Q13206 875 aaKnown RBP27.78■■■□□ 2.04
CD58-203ENST00000457047 BTBD11A6QL63 1104 aa27.77■■■□□ 2.04
CD58-203ENST00000457047 DCTN1Q14203 1278 aa27.77■■■□□ 2.04
CD58-203ENST00000457047 DLG5Q8TDM6 1919 aa27.76■■■□□ 2.03
CD58-203ENST00000457047 CANXP27824 592 aaKnown RBP27.76■■■□□ 2.03
CD58-203ENST00000457047 ZPR1O75312 459 aa27.75■■■□□ 2.03
CD58-203ENST00000457047 RTF1Q92541 710 aaKnown RBP27.75■■■□□ 2.03
CD58-203ENST00000457047 FMNL2Q96PY5 1086 aa27.75■■■□□ 2.03
CD58-203ENST00000457047 NARFQ9UHQ1 456 aa27.75■■■□□ 2.03
CD58-203ENST00000457047 STARD3NLO95772 234 aa27.74■■■□□ 2.03
CD58-203ENST00000457047 TM4SF1P30408 202 aa27.74■■■□□ 2.03
CD58-203ENST00000457047 TGFB2P61812 414 aa27.74■■■□□ 2.03
CD58-203ENST00000457047 PLEKHF1Q96S99 279 aa27.74■■■□□ 2.03
CD58-203ENST00000457047 A0A0G2JLW4 131 aa27.73■■■□□ 2.03
CD58-203ENST00000457047 RALBP1Q15311 655 aa27.73■■■□□ 2.03
CD58-203ENST00000457047 BCL2L12Q9HB09 334 aa27.73■■■□□ 2.03
CD58-203ENST00000457047 BRCA1P38398 1863 aaKnown RBP27.72■■■□□ 2.03
CD58-203ENST00000457047 POLRMTO00411 1230 aaKnown RBP27.72■■■□□ 2.03
CD58-203ENST00000457047 HTATSF1O43719 755 aaKnown RBP27.72■■■□□ 2.03
CD58-203ENST00000457047 EIF5P55010 431 aaKnown RBP27.72■■■□□ 2.03
CD58-203ENST00000457047 DPEP1P16444 411 aa27.71■■■□□ 2.03
CD58-203ENST00000457047 TEX13AQ9BXU3 409 aaPredicted RBP27.71■■■□□ 2.03
CD58-203ENST00000457047 AFDNP55196 1824 aaKnown RBP27.7■■■□□ 2.03
CD58-203ENST00000457047 NFIXQ14938 502 aa27.69■■■□□ 2.02
CD58-203ENST00000457047 SCN7AQ01118 1682 aa27.69■■■□□ 2.02
CD58-203ENST00000457047 PRAMEF22A3QJZ6 481 aa27.68■■■□□ 2.02
CD58-203ENST00000457047 NRXN2Q9P2S2 1712 aa27.68■■■□□ 2.02
CD58-203ENST00000457047 A1BGP04217 495 aa27.67■■■□□ 2.02
CD58-203ENST00000457047 KCNA3P22001 575 aa27.67■■■□□ 2.02
CD58-203ENST00000457047 USP16Q9Y5T5 823 aa27.67■■■□□ 2.02
CD58-203ENST00000457047 NEFMP07197 916 aa27.66■■■□□ 2.02
CD58-203ENST00000457047 BCS1LQ9Y276 419 aa27.66■■■□□ 2.02
CD58-203ENST00000457047 A0A087WZG4 1122 aa27.65■■■□□ 2.02
CD58-203ENST00000457047 IL6STP40189 918 aaPredicted RBP27.65■■■□□ 2.02
CD58-203ENST00000457047 NFE2L2Q16236 605 aa27.65■■■□□ 2.02
CD58-203ENST00000457047 ZNF330Q9Y3S2 320 aaPredicted RBP27.65■■■□□ 2.02
CD58-203ENST00000457047 KDM3BQ7LBC6 1761 aa27.64■■■□□ 2.02
CD58-203ENST00000457047 TAF7Q15545 349 aaPredicted RBP27.64■■■□□ 2.01
CD58-203ENST00000457047 MIS18AQ9NYP9 233 aa27.64■■■□□ 2.01
CD58-203ENST00000457047 TBC1D2BQ9UPU7 963 aa27.64■■■□□ 2.01
CD58-203ENST00000457047 ADCY9O60503 1353 aa27.63■■■□□ 2.01
CD58-203ENST00000457047 MYBBP1AQ9BQG0 1328 aaKnown RBP27.63■■■□□ 2.01
CD58-203ENST00000457047 PIP4K2AP48426 406 aaPredicted RBP27.63■■■□□ 2.01
CD58-203ENST00000457047 THUMPD2Q9BTF0 503 aaKnown RBP27.63■■■□□ 2.01
CD58-203ENST00000457047 MAPK8IP3Q9UPT6 1336 aa27.62■■■□□ 2.01
CD58-203ENST00000457047 ATP10DQ9P241 1426 aa27.62■■■□□ 2.01
CD58-203ENST00000457047 SNRPA1P09661 255 aaKnown RBP27.62■■■□□ 2.01
CD58-203ENST00000457047 CHRNA5P30532 468 aa27.62■■■□□ 2.01
CD58-203ENST00000457047 BCORQ6W2J9 1755 aa27.61■■■□□ 2.01
CD58-203ENST00000457047 SERPINB2P05120 415 aa27.61■■■□□ 2.01
CD58-203ENST00000457047 BICDL1Q6ZP65 573 aa27.61■■■□□ 2.01
CD58-203ENST00000457047 ARFGEF1Q9Y6D6 1849 aa27.6■■■□□ 2.01
CD58-203ENST00000457047 TBC1D9BQ66K14 1250 aa27.6■■■□□ 2.01
CD58-203ENST00000457047 PNNQ9H307 717 aaKnown RBP27.6■■■□□ 2.01
CD58-203ENST00000457047 LAMB4A4D0S4 1761 aa27.59■■■□□ 2.01
CD58-203ENST00000457047 CARMIL3Q8ND23 1372 aa27.58■■■□□ 2.01
CD58-203ENST00000457047 CAMTA2O94983 1202 aa27.57■■■□□ 2
CD58-203ENST00000457047 PIM2Q9P1W9 311 aa27.57■■■□□ 2
CD58-203ENST00000457047 DLEC1Q9Y238 1755 aa27.55■■■□□ 2
CD58-203ENST00000457047 NBPF26B4DH59 902 aa27.55■■■□□ 2
CD58-203ENST00000457047 NBPF10Q6P3W6 841 aaKnown RBP27.55■■■□□ 2
CD58-203ENST00000457047 DZIP3Q86Y13 1208 aaKnown RBP27.55■■■□□ 2
CD58-203ENST00000457047 NBPF15Q8N660 670 aa27.55■■■□□ 2
CD58-203ENST00000457047 ANKRD31Q8N7Z5 1873 aa27.54■■■□□ 2
CD58-203ENST00000457047 PNISRQ8TF01 805 aaKnown RBP27.54■■■□□ 2
CD58-203ENST00000457047 DALRD3Q5D0E6 543 aaKnown RBP27.53■■■□□ 2
CD58-203ENST00000457047 ARHGAP27Q6ZUM4 889 aa27.53■■■□□ 2
CD58-203ENST00000457047 NPM2Q86SE8 214 aaKnown RBP27.53■■■□□ 2
CD58-203ENST00000457047 EIF4A1P60842 406 aaKnown RBP27.52■■■□□ 2
CD58-203ENST00000457047 GIGYF1O75420 1035 aaPredicted RBP27.51■■□□□ 1.99
CD58-203ENST00000457047 RIPK4P57078 832 aa27.51■■□□□ 1.99
CD58-203ENST00000457047 CCDC146Q8IYE0 955 aa27.51■■□□□ 1.99
CD58-203ENST00000457047 PRKRIP1Q9H875 184 aaPredicted RBP27.51■■□□□ 1.99
CD58-203ENST00000457047 TMPOP42166 694 aaKnown RBP27.49■■□□□ 1.99
CD58-203ENST00000457047 PRR5LQ6MZQ0 368 aa27.49■■□□□ 1.99
CD58-203ENST00000457047 CCDC24Q8N4L8 307 aa27.49■■□□□ 1.99
CD58-203ENST00000457047 ZNF526Q8TF50 670 aaPredicted RBP27.49■■□□□ 1.99
CD58-203ENST00000457047 C1QTNF8P60827 252 aa27.48■■□□□ 1.99
CD58-203ENST00000457047 COL11A2P13942 1736 aaPredicted RBP27.48■■□□□ 1.99
CD58-203ENST00000457047 C2CD5Q86YS7 1000 aa27.47■■□□□ 1.99
CD58-203ENST00000457047 RRP7AQ9Y3A4 280 aaKnown RBP27.47■■□□□ 1.99
CD58-203ENST00000457047 SETDB2Q96T68 719 aa27.46■■□□□ 1.99
CD58-203ENST00000457047 GPBP1L1Q9HC44 474 aaPredicted RBP27.46■■□□□ 1.99
CD58-203ENST00000457047 WDR43Q15061 677 aaKnown RBP eCLIP27.44■■□□□ 1.98
CD58-203ENST00000457047 TSPYL4Q9UJ04 414 aa27.44■■□□□ 1.98
CD58-203ENST00000457047 ADAMTS8Q9UP79 889 aa27.44■■□□□ 1.98
CD58-203ENST00000457047 CLEC4GQ6UXB4 293 aa27.43■■□□□ 1.98
CD58-203ENST00000457047 BRIP1Q9BX63 1249 aa27.43■■□□□ 1.98
CD58-203ENST00000457047 H0YIN7 160 aa27.42■■□□□ 1.98
CD58-203ENST00000457047 NEUROD2Q15784 382 aa27.42■■□□□ 1.98
CD58-203ENST00000457047 CNBD1Q8NA66 436 aa27.42■■□□□ 1.98
CD58-203ENST00000457047 RUNDC1Q96C34 613 aa27.42■■□□□ 1.98
CD58-203ENST00000457047 LMOD3Q0VAK6 560 aa27.41■■□□□ 1.98
CD58-203ENST00000457047 ZNF652Q9Y2D9 606 aa27.41■■□□□ 1.98
CD58-203ENST00000457047 HLFQ16534 295 aa27.41■■□□□ 1.98
CD58-203ENST00000457047 C9orf131Q5VYM1 1079 aa27.41■■□□□ 1.98
CD58-203ENST00000457047 TTLL6Q8N841 843 aa27.41■■□□□ 1.98
CD58-203ENST00000457047 SBF1O95248 1867 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms