RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 SETSIPP0DME0 302 aa5.8□□□□□ -1.48
PCDH9-203ENST00000456367 PRKAR2BP31323 418 aa5.8□□□□□ -1.48
PCDH9-203ENST00000456367 TYRO3Q06418 890 aa5.8□□□□□ -1.48
PCDH9-203ENST00000456367 SMC1AQ14683 1233 aaKnown RBP5.8□□□□□ -1.48
PCDH9-203ENST00000456367 ATL3Q6DD88 541 aa5.8□□□□□ -1.48
PCDH9-203ENST00000456367 BANK1Q8NDB2 785 aa5.8□□□□□ -1.48
PCDH9-203ENST00000456367 PCDHB15Q9Y5E8 787 aa5.8□□□□□ -1.48
PCDH9-203ENST00000456367 YEATS4O95619 227 aa5.79□□□□□ -1.48
PCDH9-203ENST00000456367 SLC3A2P08195 630 aaKnown RBP5.79□□□□□ -1.48
PCDH9-203ENST00000456367 ARHGAP25P42331 645 aa5.79□□□□□ -1.48
PCDH9-203ENST00000456367 MAP2K1Q02750 393 aaPredicted RBP5.79□□□□□ -1.48
PCDH9-203ENST00000456367 SPA17Q15506 151 aa5.79□□□□□ -1.48
PCDH9-203ENST00000456367 GIMAP6Q6P9H5 292 aa5.79□□□□□ -1.48
PCDH9-203ENST00000456367 GOLGA5Q8TBA6 731 aa5.79□□□□□ -1.48
PCDH9-203ENST00000456367 CCDC12Q8WUD4 166 aaPredicted RBP5.79□□□□□ -1.48
PCDH9-203ENST00000456367 KIF1BPQ96EK5 621 aa5.79□□□□□ -1.48
PCDH9-203ENST00000456367 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.79□□□□□ -1.48
PCDH9-203ENST00000456367 F13A1P00488 732 aa5.79□□□□□ -1.48
PCDH9-203ENST00000456367 ANO6Q4KMQ2 910 aa5.79□□□□□ -1.48
PCDH9-203ENST00000456367 KANK3Q6NY19 840 aa5.79□□□□□ -1.48
PCDH9-203ENST00000456367 CKAP2LQ8IYA6 745 aa5.79□□□□□ -1.48
PCDH9-203ENST00000456367 TRIM22Q8IYM9 498 aa5.79□□□□□ -1.48
PCDH9-203ENST00000456367 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.79□□□□□ -1.48
PCDH9-203ENST00000456367 PIK3C2GO75747 1445 aa5.79□□□□□ -1.48
PCDH9-203ENST00000456367 PTPRCP08575 1304 aa5.79□□□□□ -1.48
PCDH9-203ENST00000456367 ZMYM4Q5VZL5 1548 aa5.79□□□□□ -1.48
PCDH9-203ENST00000456367 CCDC69A6NI79 296 aa5.79□□□□□ -1.48
PCDH9-203ENST00000456367 GCOM1H8Y6P7 765 aaPredicted RBP5.79□□□□□ -1.48
PCDH9-203ENST00000456367 MYZAPP0CAP1 466 aa5.79□□□□□ -1.48
PCDH9-203ENST00000456367 PTGS1P23219 599 aa5.79□□□□□ -1.48
PCDH9-203ENST00000456367 EPS15P42566 896 aa5.79□□□□□ -1.48
PCDH9-203ENST00000456367 CEBPZQ03701 1054 aaKnown RBP5.79□□□□□ -1.48
PCDH9-203ENST00000456367 NFE2L2Q16236 605 aa5.79□□□□□ -1.48
PCDH9-203ENST00000456367 C9orf84Q5VXU9 1444 aa5.79□□□□□ -1.48
PCDH9-203ENST00000456367 ZSCAN26Q16670 478 aa5.79□□□□□ -1.48
PCDH9-203ENST00000456367 PYM1Q9BRP8 204 aaKnown RBP5.79□□□□□ -1.48
PCDH9-203ENST00000456367 LMBRD1Q9NUN5 540 aa5.79□□□□□ -1.48
PCDH9-203ENST00000456367 ANKRD36BQ8N2N9 1353 aa5.78□□□□□ -1.48
PCDH9-203ENST00000456367 GJB2P29033 226 aa5.78□□□□□ -1.48
PCDH9-203ENST00000456367 BRPF1P55201 1214 aaPredicted RBP5.78□□□□□ -1.48
PCDH9-203ENST00000456367 GGT6Q6P531 493 aa5.78□□□□□ -1.48
PCDH9-203ENST00000456367 CCAR1Q8IX12 1150 aaKnown RBP5.78□□□□□ -1.48
PCDH9-203ENST00000456367 NSRP1Q9H0G5 558 aaKnown RBP5.78□□□□□ -1.48
PCDH9-203ENST00000456367 HMG20BQ9P0W2 317 aa5.78□□□□□ -1.48
PCDH9-203ENST00000456367 VPS18Q9P253 973 aa5.78□□□□□ -1.48
PCDH9-203ENST00000456367 RAD50Q92878 1312 aa5.78□□□□□ -1.48
PCDH9-203ENST00000456367 SH3BGRP55822 239 aaPredicted RBP5.78□□□□□ -1.48
PCDH9-203ENST00000456367 CCDC121Q6ZUS5 278 aa5.78□□□□□ -1.48
PCDH9-203ENST00000456367 CNPY4Q8N129 248 aa5.78□□□□□ -1.48
PCDH9-203ENST00000456367 CTAGE1Q96RT6 745 aa5.78□□□□□ -1.48
PCDH9-203ENST00000456367 MPHOSPH8Q99549 860 aa5.78□□□□□ -1.48
PCDH9-203ENST00000456367 MYO1BO43795 1136 aa5.78□□□□□ -1.48
PCDH9-203ENST00000456367 IGSF3O75054 1194 aa5.78□□□□□ -1.48
PCDH9-203ENST00000456367 MCM6Q14566 821 aa5.78□□□□□ -1.48
PCDH9-203ENST00000456367 HSP90AB2PQ58FF8 381 aa5.78□□□□□ -1.48
PCDH9-203ENST00000456367 FSIP1Q8NA03 581 aa5.78□□□□□ -1.48
PCDH9-203ENST00000456367 FAM76AQ8TAV0 307 aa5.78□□□□□ -1.48
PCDH9-203ENST00000456367 ALS2CR12Q96Q35 445 aa5.78□□□□□ -1.48
PCDH9-203ENST00000456367 PHAXQ9H814 394 aaKnown RBP5.78□□□□□ -1.48
PCDH9-203ENST00000456367 BRD3Q15059 726 aa5.78□□□□□ -1.48
PCDH9-203ENST00000456367 NUP160Q12769 1436 aa5.77□□□□□ -1.48
PCDH9-203ENST00000456367 CTAGE9A4FU28 777 aa5.77□□□□□ -1.49
PCDH9-203ENST00000456367 VGLL3A8MV65 326 aa5.77□□□□□ -1.49
PCDH9-203ENST00000456367 SOX12O15370 315 aa5.77□□□□□ -1.49
PCDH9-203ENST00000456367 SLC4A2P04920 1241 aa5.77□□□□□ -1.49
PCDH9-203ENST00000456367 INPP5BP32019 993 aa5.77□□□□□ -1.49
PCDH9-203ENST00000456367 FOSBP53539 338 aa5.77□□□□□ -1.49
PCDH9-203ENST00000456367 C1orf141Q5JVX7 400 aa5.77□□□□□ -1.49
PCDH9-203ENST00000456367 AFAP1L1Q8TED9 768 aa5.77□□□□□ -1.49
PCDH9-203ENST00000456367 PUS7Q96PZ0 661 aaKnown RBP5.77□□□□□ -1.49
PCDH9-203ENST00000456367 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.77□□□□□ -1.49
PCDH9-203ENST00000456367 GAPVD1Q14C86 1478 aa5.77□□□□□ -1.49
PCDH9-203ENST00000456367 PCF11O94913 1555 aaKnown RBP5.77□□□□□ -1.49
PCDH9-203ENST00000456367 GOLIM4O00461 696 aa5.77□□□□□ -1.49
PCDH9-203ENST00000456367 SEC24BO95487 1268 aa5.77□□□□□ -1.49
PCDH9-203ENST00000456367 SPAG1Q07617 926 aa5.77□□□□□ -1.49
PCDH9-203ENST00000456367 ANKS4BQ8N8V4 417 aa5.77□□□□□ -1.49
PCDH9-203ENST00000456367 GDPD2Q9HCC8 539 aa5.77□□□□□ -1.49
PCDH9-203ENST00000456367 ZNF644Q9H582 1327 aaPredicted RBP5.77□□□□□ -1.49
PCDH9-203ENST00000456367 KIF5BP33176 963 aa5.77□□□□□ -1.49
PCDH9-203ENST00000456367 EVCP57679 992 aa5.77□□□□□ -1.49
PCDH9-203ENST00000456367 SEPT7Q16181 437 aaKnown RBP5.77□□□□□ -1.49
PCDH9-203ENST00000456367 MSL1Q68DK7 614 aa5.77□□□□□ -1.49
PCDH9-203ENST00000456367 FERMT3Q86UX7 667 aa5.77□□□□□ -1.49
PCDH9-203ENST00000456367 GPR161Q8N6U8 529 aaKnown RBP5.77□□□□□ -1.49
PCDH9-203ENST00000456367 ANTXR1Q9H6X2 564 aa5.77□□□□□ -1.49
PCDH9-203ENST00000456367 TROQ12816 1431 aaPredicted RBP5.77□□□□□ -1.49
PCDH9-203ENST00000456367 UBASH3AP57075 661 aa5.77□□□□□ -1.49
PCDH9-203ENST00000456367 AMOTL1Q8IY63 956 aa5.77□□□□□ -1.49
PCDH9-203ENST00000456367 KCNG4Q8TDN1 519 aa5.77□□□□□ -1.49
PCDH9-203ENST00000456367 GTF3C6Q969F1 213 aa5.77□□□□□ -1.49
PCDH9-203ENST00000456367 DRC1Q96MC2 740 aa5.77□□□□□ -1.49
PCDH9-203ENST00000456367 GGNBP2Q9H3C7 697 aa5.77□□□□□ -1.49
PCDH9-203ENST00000456367 ASXL1Q8IXJ9 1541 aa5.76□□□□□ -1.49
PCDH9-203ENST00000456367 FANCD2Q9BXW9 1451 aa5.76□□□□□ -1.49
PCDH9-203ENST00000456367 BLMP54132 1417 aaPredicted RBP5.76□□□□□ -1.49
PCDH9-203ENST00000456367 POLR3AO14802 1390 aaPredicted RBP5.76□□□□□ -1.49
PCDH9-203ENST00000456367 RPGRIP1LQ68CZ1 1315 aa5.76□□□□□ -1.49
PCDH9-203ENST00000456367 CCDC196A0A1B0GTZ2 297 aa5.76□□□□□ -1.49
PCDH9-203ENST00000456367 SRGAP3O43295 1099 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms