RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 CD33P20138 364 aa5.88□□□□□ -1.47
LINC02540-201ENST00000455554 USP4Q13107 963 aa5.88□□□□□ -1.47
LINC02540-201ENST00000455554 NLRP8Q86W28 1048 aa5.88□□□□□ -1.47
LINC02540-201ENST00000455554 C1orf216Q8TAB5 229 aa5.88□□□□□ -1.47
LINC02540-201ENST00000455554 SNRKQ9NRH2 765 aa5.88□□□□□ -1.47
LINC02540-201ENST00000455554 DOLKQ9UPQ8 538 aa5.88□□□□□ -1.47
LINC02540-201ENST00000455554 USP3Q9Y6I4 520 aa5.88□□□□□ -1.47
LINC02540-201ENST00000455554 DCDC2BA2VCK2 349 aa5.87□□□□□ -1.47
LINC02540-201ENST00000455554 ADH6P28332 368 aa5.87□□□□□ -1.47
LINC02540-201ENST00000455554 SCNN1DP51172 638 aa5.87□□□□□ -1.47
LINC02540-201ENST00000455554 ZNF295-AS1Q8N0V1 137 aa5.87□□□□□ -1.47
LINC02540-201ENST00000455554 STRN4Q9NRL3 753 aa5.87□□□□□ -1.47
LINC02540-201ENST00000455554 ATXN7O15265 892 aaPredicted RBP5.86□□□□□ -1.47
LINC02540-201ENST00000455554 RSPO4Q2I0M5 234 aaPredicted RBP5.86□□□□□ -1.47
LINC02540-201ENST00000455554 ZMYM1Q5SVZ6 1142 aa5.86□□□□□ -1.47
LINC02540-201ENST00000455554 FAM182BQ5T319 152 aa5.86□□□□□ -1.47
LINC02540-201ENST00000455554 PHTF2Q8N3S3 785 aa5.86□□□□□ -1.47
LINC02540-201ENST00000455554 IL27Q8NEV9 243 aa5.86□□□□□ -1.47
LINC02540-201ENST00000455554 KRTAP4-12Q9BQ66 201 aa5.86□□□□□ -1.47
LINC02540-201ENST00000455554 AVENQ9NQS1 362 aaPredicted RBP5.86□□□□□ -1.47
LINC02540-201ENST00000455554 MAPTP10636 758 aaKnown RBP5.85□□□□□ -1.47
LINC02540-201ENST00000455554 PCBP4P57723 403 aaKnown RBP5.85□□□□□ -1.47
LINC02540-201ENST00000455554 TNP2Q05952 138 aa5.85□□□□□ -1.47
LINC02540-201ENST00000455554 OXLD1Q5BKU9 147 aa5.85□□□□□ -1.47
LINC02540-201ENST00000455554 AIDAQ96BJ3 306 aa5.85□□□□□ -1.47
LINC02540-201ENST00000455554 SIRT1Q96EB6 747 aa5.85□□□□□ -1.47
LINC02540-201ENST00000455554 PLVAPQ9BX97 442 aa5.85□□□□□ -1.47
LINC02540-201ENST00000455554 NIFKQ9BYG3 293 aaKnown RBP5.85□□□□□ -1.47
LINC02540-201ENST00000455554 INHAP05111 366 aa5.84□□□□□ -1.47
LINC02540-201ENST00000455554 SPATA31C1P0DKV0 1188 aa5.84□□□□□ -1.47
LINC02540-201ENST00000455554 GATA4P43694 442 aa5.84□□□□□ -1.47
LINC02540-201ENST00000455554 GDF10P55107 478 aa5.84□□□□□ -1.47
LINC02540-201ENST00000455554 EIF4G2P78344 907 aaKnown RBP eCLIP5.84□□□□□ -1.47
LINC02540-201ENST00000455554 SLFNL1Q499Z3 407 aa5.84□□□□□ -1.47
LINC02540-201ENST00000455554 ARSJQ5FYB0 599 aaPredicted RBP5.84□□□□□ -1.47
LINC02540-201ENST00000455554 NKAPLQ5M9Q1 402 aa5.84□□□□□ -1.47
LINC02540-201ENST00000455554 A0A1W2PNR3 127 aa5.83□□□□□ -1.48
LINC02540-201ENST00000455554 FAM229AH3BQW9 127 aa5.83□□□□□ -1.48
LINC02540-201ENST00000455554 KHNYNO15037 678 aaKnown RBP5.83□□□□□ -1.48
LINC02540-201ENST00000455554 COL9A3Q14050 684 aaPredicted RBP5.83□□□□□ -1.48
LINC02540-201ENST00000455554 NEUROD2Q15784 382 aa5.83□□□□□ -1.48
LINC02540-201ENST00000455554 NBPF1Q3BBV0 1214 aa5.83□□□□□ -1.48
LINC02540-201ENST00000455554 TPSG1Q9NRR2 321 aa5.83□□□□□ -1.48
LINC02540-201ENST00000455554 FAM157BP0CG42 384 aa5.82□□□□□ -1.48
LINC02540-201ENST00000455554 SMTNP53814 917 aa5.82□□□□□ -1.48
LINC02540-201ENST00000455554 ZNF468Q5VIY5 522 aaPredicted RBP5.82□□□□□ -1.48
LINC02540-201ENST00000455554 CHIC2Q9UKJ5 165 aa5.82□□□□□ -1.48
LINC02540-201ENST00000455554 PRR12Q9ULL5 1215 aa5.82□□□□□ -1.48
LINC02540-201ENST00000455554 TATP17735 454 aaPredicted RBP5.81□□□□□ -1.48
LINC02540-201ENST00000455554 IRF5Q13568 498 aa5.81□□□□□ -1.48
LINC02540-201ENST00000455554 LCE3BQ5TA77 95 aa5.81□□□□□ -1.48
LINC02540-201ENST00000455554 C8orf86Q6ZUL3 223 aa5.81□□□□□ -1.48
LINC02540-201ENST00000455554 ZIC5Q96T25 663 aa5.81□□□□□ -1.48
LINC02540-201ENST00000455554 MDFIQ99750 246 aa5.81□□□□□ -1.48
LINC02540-201ENST00000455554 ZDHHC3Q9NYG2 299 aa5.81□□□□□ -1.48
LINC02540-201ENST00000455554 TBC1D2BQ9UPU7 963 aa5.81□□□□□ -1.48
LINC02540-201ENST00000455554 GJA3Q9Y6H8 435 aa5.81□□□□□ -1.48
LINC02540-201ENST00000455554 SPDYE3A6NKU9 549 aa5.8□□□□□ -1.48
LINC02540-201ENST00000455554 SERTAD1Q9UHV2 236 aa5.8□□□□□ -1.48
LINC02540-201ENST00000455554 IQSEC3Q9UPP2 1182 aaPredicted RBP5.8□□□□□ -1.48
LINC02540-201ENST00000455554 PARP3Q9Y6F1 533 aa5.8□□□□□ -1.48
LINC02540-201ENST00000455554 ELOA3CA0A087WX78 387 aaPredicted RBP5.79□□□□□ -1.48
LINC02540-201ENST00000455554 SCO2A0A1W2PP80 73 aa5.79□□□□□ -1.48
LINC02540-201ENST00000455554 ELOA3DA6NLF2 546 aaPredicted RBP5.79□□□□□ -1.48
LINC02540-201ENST00000455554 TMEM229AB2RXF0 380 aa5.79□□□□□ -1.48
LINC02540-201ENST00000455554 ALAS2P22557 587 aa5.79□□□□□ -1.48
LINC02540-201ENST00000455554 ELOA3BQ3SY89 546 aa5.79□□□□□ -1.48
LINC02540-201ENST00000455554 PRRT3Q5FWE3 981 aa5.79□□□□□ -1.48
LINC02540-201ENST00000455554 SAMD5Q5TGI4 173 aa5.79□□□□□ -1.48
LINC02540-201ENST00000455554 ELOA3Q8NG57 546 aa5.79□□□□□ -1.48
LINC02540-201ENST00000455554 PRM3Q9NNZ6 103 aa5.79□□□□□ -1.48
LINC02540-201ENST00000455554 MARK1Q9P0L2 795 aa5.79□□□□□ -1.48
LINC02540-201ENST00000455554 CDK2AP1O14519 115 aa5.78□□□□□ -1.48
LINC02540-201ENST00000455554 EFSO43281 561 aa5.78□□□□□ -1.48
LINC02540-201ENST00000455554 DYRK3O43781 588 aa5.78□□□□□ -1.48
LINC02540-201ENST00000455554 APBA3O96018 575 aa5.78□□□□□ -1.48
LINC02540-201ENST00000455554 TXLNAP40222 546 aa5.78□□□□□ -1.48
LINC02540-201ENST00000455554 LAMC2Q13753 1193 aa5.78□□□□□ -1.48
LINC02540-201ENST00000455554 MTFR1Q15390 333 aa5.78□□□□□ -1.48
LINC02540-201ENST00000455554 MAP7D1Q3KQU3 841 aa5.78□□□□□ -1.48
LINC02540-201ENST00000455554 SLC4A9Q96Q91 983 aa5.78□□□□□ -1.48
LINC02540-201ENST00000455554 STARD13Q9Y3M8 1113 aa5.78□□□□□ -1.48
LINC02540-201ENST00000455554 A6NJY4 79 aa5.77□□□□□ -1.49
LINC02540-201ENST00000455554 BICDL1Q6ZP65 573 aa5.77□□□□□ -1.49
LINC02540-201ENST00000455554 ZDHHC1Q8WTX9 485 aa5.77□□□□□ -1.49
LINC02540-201ENST00000455554 KRTAP9-9Q9BYP9 154 aa5.77□□□□□ -1.49
LINC02540-201ENST00000455554 KRTAP9-4Q9BYQ2 154 aa5.77□□□□□ -1.49
LINC02540-201ENST00000455554 CABP1Q9NZU7 370 aa5.77□□□□□ -1.49
LINC02540-201ENST00000455554 VAC14Q08AM6 782 aa5.76□□□□□ -1.49
LINC02540-201ENST00000455554 GRIK4Q16099 956 aa5.76□□□□□ -1.49
LINC02540-201ENST00000455554 SYT9Q86SS6 491 aa5.76□□□□□ -1.49
LINC02540-201ENST00000455554 KRTAP19-1Q8IUB9 90 aa5.76□□□□□ -1.49
LINC02540-201ENST00000455554 PLPP7Q8NBV4 271 aa5.76□□□□□ -1.49
LINC02540-201ENST00000455554 SLC30A3Q99726 388 aa5.76□□□□□ -1.49
LINC02540-201ENST00000455554 SIN3BO75182 1162 aa5.75□□□□□ -1.49
LINC02540-201ENST00000455554 ALBP02768 609 aa5.75□□□□□ -1.49
LINC02540-201ENST00000455554 PRSS36Q5K4E3 855 aa5.75□□□□□ -1.49
LINC02540-201ENST00000455554 SH3PXD2AQ5TCZ1 1133 aa5.75□□□□□ -1.49
LINC02540-201ENST00000455554 RAB44Q7Z6P3 723 aaPredicted RBP5.75□□□□□ -1.49
LINC02540-201ENST00000455554 BCANQ96GW7 911 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms