RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 GOLGA2Q08379 1002 aa6.56□□□□□ -1.36
RIF1-207ENST00000454583 AKT1S1Q96B36 256 aa6.56□□□□□ -1.36
RIF1-207ENST00000454583 SSUH2Q9Y2M2 353 aa6.56□□□□□ -1.36
RIF1-207ENST00000454583 FAM9BQ8IZU0 186 aa6.55□□□□□ -1.36
RIF1-207ENST00000454583 ZCRB1Q8TBF4 217 aaKnown RBP6.55□□□□□ -1.36
RIF1-207ENST00000454583 KAZALD1Q96I82 304 aa6.55□□□□□ -1.36
RIF1-207ENST00000454583 SALL3Q9BXA9 1300 aa6.55□□□□□ -1.36
RIF1-207ENST00000454583 CNTNAP4Q9C0A0 1308 aa6.55□□□□□ -1.36
RIF1-207ENST00000454583 LOC285556D6RIA3 1793 aa6.55□□□□□ -1.36
RIF1-207ENST00000454583 POLA2Q14181 598 aa6.55□□□□□ -1.36
RIF1-207ENST00000454583 C20orf194Q5TEA3 1177 aa6.55□□□□□ -1.36
RIF1-207ENST00000454583 IFNL2Q8IZJ0 200 aa6.55□□□□□ -1.36
RIF1-207ENST00000454583 PRDM11Q9NQV5 511 aa6.55□□□□□ -1.36
RIF1-207ENST00000454583 ERBB4Q15303 1308 aa6.54□□□□□ -1.36
RIF1-207ENST00000454583 ITPK1Q13572 414 aa6.54□□□□□ -1.36
RIF1-207ENST00000454583 ZNF790Q6PG37 636 aa6.54□□□□□ -1.36
RIF1-207ENST00000454583 TSR2Q969E8 191 aaKnown RBP6.54□□□□□ -1.36
RIF1-207ENST00000454583 LRRC4BQ9NT99 713 aa6.54□□□□□ -1.36
RIF1-207ENST00000454583 RRP7AQ9Y3A4 280 aaKnown RBP6.54□□□□□ -1.36
RIF1-207ENST00000454583 FKBP8Q14318 412 aa6.54□□□□□ -1.36
RIF1-207ENST00000454583 CYP19A1P11511 503 aaPredicted RBP6.54□□□□□ -1.36
RIF1-207ENST00000454583 PIP4K2BP78356 416 aa6.54□□□□□ -1.36
RIF1-207ENST00000454583 TAF7Q15545 349 aaPredicted RBP6.54□□□□□ -1.36
RIF1-207ENST00000454583 C14orf37Q86TY3 774 aa6.54□□□□□ -1.36
RIF1-207ENST00000454583 PNNQ9H307 717 aaKnown RBP6.54□□□□□ -1.36
RIF1-207ENST00000454583 BCL2L12Q9HB09 334 aa6.54□□□□□ -1.36
RIF1-207ENST00000454583 USP21Q9UK80 565 aa6.54□□□□□ -1.36
RIF1-207ENST00000454583 COL4A5P29400 1685 aa6.54□□□□□ -1.36
RIF1-207ENST00000454583 HNRNPUQ00839 825 aaKnown RBP eCLIP6.53□□□□□ -1.36
RIF1-207ENST00000454583 INTS3Q68E01 1043 aaKnown RBP6.53□□□□□ -1.36
RIF1-207ENST00000454583 SSH1Q8WYL5 1049 aa6.53□□□□□ -1.36
RIF1-207ENST00000454583 FBXO3Q9UK99 471 aa6.53□□□□□ -1.36
RIF1-207ENST00000454583 CCDC88AQ3V6T2 1871 aa6.53□□□□□ -1.36
RIF1-207ENST00000454583 SLX4Q8IY92 1834 aa6.53□□□□□ -1.36
RIF1-207ENST00000454583 GOLGB1Q14789 3259 aaKnown RBP6.53□□□□□ -1.36
RIF1-207ENST00000454583 PROSER3Q2NL68 480 aa6.53□□□□□ -1.36
RIF1-207ENST00000454583 PLEKHO1Q53GL0 409 aaPredicted RBP6.53□□□□□ -1.36
RIF1-207ENST00000454583 ILDR1Q86SU0 546 aaPredicted RBP6.53□□□□□ -1.36
RIF1-207ENST00000454583 TRPC5Q9UL62 973 aaPredicted RBP6.53□□□□□ -1.36
RIF1-207ENST00000454583 SCN9AQ15858 1988 aa6.53□□□□□ -1.36
RIF1-207ENST00000454583 UTRNP46939 3433 aa6.53□□□□□ -1.36
RIF1-207ENST00000454583 RRP1P56182 461 aaKnown RBP6.53□□□□□ -1.36
RIF1-207ENST00000454583 SIRT2Q8IXJ6 389 aa6.53□□□□□ -1.36
RIF1-207ENST00000454583 CAMKK2Q96RR4 588 aa6.53□□□□□ -1.36
RIF1-207ENST00000454583 BCAR3O75815 825 aa6.52□□□□□ -1.37
RIF1-207ENST00000454583 EXOSC9Q06265 439 aaKnown RBP6.52□□□□□ -1.37
RIF1-207ENST00000454583 SPDYE4A6NLX3 237 aa6.52□□□□□ -1.37
RIF1-207ENST00000454583 PLSCR1O15162 318 aa6.52□□□□□ -1.37
RIF1-207ENST00000454583 CAPN15O75808 1086 aa6.52□□□□□ -1.37
RIF1-207ENST00000454583 GNAI1P63096 354 aa6.52□□□□□ -1.37
RIF1-207ENST00000454583 POLR3GLQ9BT43 218 aa6.52□□□□□ -1.37
RIF1-207ENST00000454583 PARP14Q460N5 1801 aa6.52□□□□□ -1.37
RIF1-207ENST00000454583 SPDYE2BA6NHP3 402 aa6.52□□□□□ -1.37
RIF1-207ENST00000454583 KCNQ2O43526 872 aa6.52□□□□□ -1.37
RIF1-207ENST00000454583 SPDYE6P0CI01 402 aa6.52□□□□□ -1.37
RIF1-207ENST00000454583 SPDYE2Q495Y8 402 aa6.52□□□□□ -1.37
RIF1-207ENST00000454583 MPRIPQ6WCQ1 1025 aa6.52□□□□□ -1.37
RIF1-207ENST00000454583 G2E3Q7L622 706 aa6.52□□□□□ -1.37
RIF1-207ENST00000454583 LINC00116Q8NCU8 138 aa6.52□□□□□ -1.37
RIF1-207ENST00000454583 ZNF496Q96IT1 587 aaPredicted RBP6.52□□□□□ -1.37
RIF1-207ENST00000454583 ZBTB7BO15156 539 aaPredicted RBP6.51□□□□□ -1.37
RIF1-207ENST00000454583 WDR43Q15061 677 aaKnown RBP eCLIP6.51□□□□□ -1.37
RIF1-207ENST00000454583 SGIP1Q9BQI5 828 aa6.51□□□□□ -1.37
RIF1-207ENST00000454583 SPG7Q9UQ90 795 aa6.51□□□□□ -1.37
RIF1-207ENST00000454583 NFATC2IPQ8NCF5 419 aa6.51□□□□□ -1.37
RIF1-207ENST00000454583 BCL11BQ9C0K0 894 aaPredicted RBP6.51□□□□□ -1.37
RIF1-207ENST00000454583 PALLDQ8WX93 1383 aa6.51□□□□□ -1.37
RIF1-207ENST00000454583 TRIM27P14373 513 aa6.51□□□□□ -1.37
RIF1-207ENST00000454583 TATP17735 454 aaPredicted RBP6.51□□□□□ -1.37
RIF1-207ENST00000454583 EIF5P55010 431 aaKnown RBP6.51□□□□□ -1.37
RIF1-207ENST00000454583 RBM6P78332 1123 aaKnown RBP6.51□□□□□ -1.37
RIF1-207ENST00000454583 LMOD3Q0VAK6 560 aa6.51□□□□□ -1.37
RIF1-207ENST00000454583 ASAP1Q9ULH1 1129 aa6.51□□□□□ -1.37
RIF1-207ENST00000454583 RTL9Q8NET4 1388 aa6.5□□□□□ -1.37
RIF1-207ENST00000454583 C10orf71Q711Q0 1435 aa6.5□□□□□ -1.37
RIF1-207ENST00000454583 IGKV5-2P06315 115 aa6.5□□□□□ -1.37
RIF1-207ENST00000454583 BEND3Q5T5X7 828 aa6.5□□□□□ -1.37
RIF1-207ENST00000454583 RC3H1Q5TC82 1133 aaKnown RBP6.5□□□□□ -1.37
RIF1-207ENST00000454583 ZNF530Q6P9A1 599 aaPredicted RBP6.5□□□□□ -1.37
RIF1-207ENST00000454583 ZBTB40Q9NUA8 1239 aa6.5□□□□□ -1.37
RIF1-207ENST00000454583 PHIPQ8WWQ0 1821 aa6.5□□□□□ -1.37
RIF1-207ENST00000454583 PTPRCP08575 1304 aa6.5□□□□□ -1.37
RIF1-207ENST00000454583 KLRG2A4D1S0 409 aaPredicted RBP6.5□□□□□ -1.37
RIF1-207ENST00000454583 MTX1Q13505 466 aa6.49□□□□□ -1.37
RIF1-207ENST00000454583 PDE3AQ14432 1141 aa6.49□□□□□ -1.37
RIF1-207ENST00000454583 SEPT12Q8IYM1 358 aa6.49□□□□□ -1.37
RIF1-207ENST00000454583 U2SURPO15042 1029 aaKnown RBP6.49□□□□□ -1.37
RIF1-207ENST00000454583 ZNF772Q68DY9 489 aaPredicted RBP6.49□□□□□ -1.37
RIF1-207ENST00000454583 ISCA1Q9BUE6 129 aa6.49□□□□□ -1.37
RIF1-207ENST00000454583 USP16Q9Y5T5 823 aa6.49□□□□□ -1.37
RIF1-207ENST00000454583 ZNF609O15014 1411 aa6.49□□□□□ -1.37
RIF1-207ENST00000454583 RFX5P48382 616 aaPredicted RBP6.49□□□□□ -1.37
RIF1-207ENST00000454583 C8orf37Q96NL8 207 aa6.49□□□□□ -1.37
RIF1-207ENST00000454583 MIS18AQ9NYP9 233 aa6.49□□□□□ -1.37
RIF1-207ENST00000454583 UBN2Q6ZU65 1347 aa6.49□□□□□ -1.37
RIF1-207ENST00000454583 HSP90AB1P08238 724 aaKnown RBP6.48□□□□□ -1.37
RIF1-207ENST00000454583 RABL6Q3YEC7 729 aaPredicted RBP6.48□□□□□ -1.37
RIF1-207ENST00000454583 TOM1L2Q6ZVM7 507 aa6.48□□□□□ -1.37
RIF1-207ENST00000454583 TRIM28Q13263 835 aaKnown RBP6.48□□□□□ -1.37
RIF1-207ENST00000454583 FAM98CQ17RN3 349 aaKnown RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms