RNA–Protein interactions for RNA: ENST00000454350.5

UBE2D4-208, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-208ENST00000454350 CFAP53Q96M91 514 aa24.86■■□□□ 1.57
UBE2D4-208ENST00000454350 COL15A1P39059 1388 aa24.85■■□□□ 1.57
UBE2D4-208ENST00000454350 POLRMTO00411 1230 aaKnown RBP24.85■■□□□ 1.57
UBE2D4-208ENST00000454350 USPL1Q5W0Q7 1092 aa24.85■■□□□ 1.57
UBE2D4-208ENST00000454350 ZNF496Q96IT1 587 aaPredicted RBP24.85■■□□□ 1.57
UBE2D4-208ENST00000454350 ZNF790Q6PG37 636 aa24.84■■□□□ 1.57
UBE2D4-208ENST00000454350 BCL2L12Q9HB09 334 aa24.84■■□□□ 1.57
UBE2D4-208ENST00000454350 NARFQ9UHQ1 456 aa24.84■■□□□ 1.57
UBE2D4-208ENST00000454350 DLG5Q8TDM6 1919 aa24.84■■□□□ 1.57
UBE2D4-208ENST00000454350 HEG1Q9ULI3 1381 aa24.83■■□□□ 1.57
UBE2D4-208ENST00000454350 TEFQ10587 303 aa24.83■■□□□ 1.57
UBE2D4-208ENST00000454350 GIGYF1O75420 1035 aaPredicted RBP24.82■■□□□ 1.56
UBE2D4-208ENST00000454350 DLEC1Q9Y238 1755 aa24.81■■□□□ 1.56
UBE2D4-208ENST00000454350 ZPR1O75312 459 aa24.81■■□□□ 1.56
UBE2D4-208ENST00000454350 EIF5P55010 431 aaKnown RBP24.81■■□□□ 1.56
UBE2D4-208ENST00000454350 TTC5Q8N0Z6 440 aa24.81■■□□□ 1.56
UBE2D4-208ENST00000454350 NUDCQ9Y266 331 aa24.81■■□□□ 1.56
UBE2D4-208ENST00000454350 BCS1LQ9Y276 419 aa24.81■■□□□ 1.56
UBE2D4-208ENST00000454350 SCN7AQ01118 1682 aa24.81■■□□□ 1.56
UBE2D4-208ENST00000454350 KCNQ3O43525 872 aa24.8■■□□□ 1.56
UBE2D4-208ENST00000454350 U2AF1L5P0DN76 240 aaPredicted RBP24.8■■□□□ 1.56
UBE2D4-208ENST00000454350 U2AF1Q01081 240 aaKnown RBP eCLIP24.8■■□□□ 1.56
UBE2D4-208ENST00000454350 NFIXQ14938 502 aa24.8■■□□□ 1.56
UBE2D4-208ENST00000454350 FCHSD2O94868 740 aa24.79■■□□□ 1.56
UBE2D4-208ENST00000454350 SBF1O95248 1867 aa24.79■■□□□ 1.56
UBE2D4-208ENST00000454350 STARD3NLO95772 234 aa24.78■■□□□ 1.56
UBE2D4-208ENST00000454350 CANXP27824 592 aaKnown RBP24.78■■□□□ 1.56
UBE2D4-208ENST00000454350 ANKRD31Q8N7Z5 1873 aa24.77■■□□□ 1.56
UBE2D4-208ENST00000454350 BCORQ6W2J9 1755 aa24.75■■□□□ 1.55
UBE2D4-208ENST00000454350 CHRNA5P30532 468 aa24.75■■□□□ 1.55
UBE2D4-208ENST00000454350 FMNL2Q96PY5 1086 aa24.75■■□□□ 1.55
UBE2D4-208ENST00000454350 BTBD11A6QL63 1104 aa24.74■■□□□ 1.55
UBE2D4-208ENST00000454350 TEX13AQ9BXU3 409 aaPredicted RBP24.74■■□□□ 1.55
UBE2D4-208ENST00000454350 PIM2Q9P1W9 311 aa24.74■■□□□ 1.55
UBE2D4-208ENST00000454350 MCM10Q7L590 875 aa24.73■■□□□ 1.55
UBE2D4-208ENST00000454350 GPBP1L1Q9HC44 474 aaPredicted RBP24.73■■□□□ 1.55
UBE2D4-208ENST00000454350 A1BGP04217 495 aa24.72■■□□□ 1.55
UBE2D4-208ENST00000454350 ARHGAP27Q6ZUM4 889 aa24.72■■□□□ 1.55
UBE2D4-208ENST00000454350 ZNF526Q8TF50 670 aaPredicted RBP24.72■■□□□ 1.55
UBE2D4-208ENST00000454350 SENP3-EIF4A1A0A087X0R7 540 aa24.71■■□□□ 1.55
UBE2D4-208ENST00000454350 SERPINB2P05120 415 aa24.71■■□□□ 1.55
UBE2D4-208ENST00000454350 IL6STP40189 918 aaPredicted RBP24.71■■□□□ 1.55
UBE2D4-208ENST00000454350 DCTN1Q14203 1278 aa24.71■■□□□ 1.55
UBE2D4-208ENST00000454350 KDM3BQ7LBC6 1761 aa24.7■■□□□ 1.55
UBE2D4-208ENST00000454350 CARMIL3Q8ND23 1372 aa24.7■■□□□ 1.55
UBE2D4-208ENST00000454350 PRAMEF22A3QJZ6 481 aa24.7■■□□□ 1.54
UBE2D4-208ENST00000454350 HTATSF1O43719 755 aaKnown RBP24.7■■□□□ 1.54
UBE2D4-208ENST00000454350 USP16Q9Y5T5 823 aa24.7■■□□□ 1.54
UBE2D4-208ENST00000454350 A0A087WZG4 1122 aa24.69■■□□□ 1.54
UBE2D4-208ENST00000454350 DALRD3Q5D0E6 543 aaKnown RBP24.69■■□□□ 1.54
UBE2D4-208ENST00000454350 CCDC88AQ3V6T2 1871 aa24.68■■□□□ 1.54
UBE2D4-208ENST00000454350 TBC1D9BQ66K14 1250 aa24.68■■□□□ 1.54
UBE2D4-208ENST00000454350 RTF1Q92541 710 aaKnown RBP24.68■■□□□ 1.54
UBE2D4-208ENST00000454350 PLEKHF1Q96S99 279 aa24.68■■□□□ 1.54
UBE2D4-208ENST00000454350 TBC1D2BQ9UPU7 963 aa24.68■■□□□ 1.54
UBE2D4-208ENST00000454350 CEP350Q5VT06 3117 aa24.68■■□□□ 1.54
UBE2D4-208ENST00000454350 COL11A2P13942 1736 aaPredicted RBP24.68■■□□□ 1.54
UBE2D4-208ENST00000454350 KIF3CO14782 793 aa24.67■■□□□ 1.54
UBE2D4-208ENST00000454350 LAMB4A4D0S4 1761 aa24.67■■□□□ 1.54
UBE2D4-208ENST00000454350 CAMTA2O94983 1202 aa24.66■■□□□ 1.54
UBE2D4-208ENST00000454350 BICDL1Q6ZP65 573 aa24.65■■□□□ 1.54
UBE2D4-208ENST00000454350 PIP4K2AP48426 406 aaPredicted RBP24.64■■□□□ 1.54
UBE2D4-208ENST00000454350 SNRPA1P09661 255 aaKnown RBP24.63■■□□□ 1.53
UBE2D4-208ENST00000454350 ZNF330Q9Y3S2 320 aaPredicted RBP24.63■■□□□ 1.53
UBE2D4-208ENST00000454350 TAF7Q15545 349 aaPredicted RBP24.62■■□□□ 1.53
UBE2D4-208ENST00000454350 C9orf131Q5VYM1 1079 aa24.62■■□□□ 1.53
UBE2D4-208ENST00000454350 NBPF26B4DH59 902 aa24.61■■□□□ 1.53
UBE2D4-208ENST00000454350 NBPF10Q6P3W6 841 aaKnown RBP24.61■■□□□ 1.53
UBE2D4-208ENST00000454350 NBPF15Q8N660 670 aa24.61■■□□□ 1.53
UBE2D4-208ENST00000454350 CACNA1SQ13698 1873 aa24.61■■□□□ 1.53
UBE2D4-208ENST00000454350 PRR5LQ6MZQ0 368 aa24.6■■□□□ 1.53
UBE2D4-208ENST00000454350 MIS18AQ9NYP9 233 aa24.6■■□□□ 1.53
UBE2D4-208ENST00000454350 DZIP3Q86Y13 1208 aaKnown RBP24.59■■□□□ 1.53
UBE2D4-208ENST00000454350 C2CD5Q86YS7 1000 aa24.59■■□□□ 1.53
UBE2D4-208ENST00000454350 FER1L6Q2WGJ9 1857 aa24.59■■□□□ 1.53
UBE2D4-208ENST00000454350 ARFGEF2Q9Y6D5 1785 aa24.59■■□□□ 1.53
UBE2D4-208ENST00000454350 PRELPP51888 382 aa24.58■■□□□ 1.53
UBE2D4-208ENST00000454350 NFE2L2Q16236 605 aa24.58■■□□□ 1.53
UBE2D4-208ENST00000454350 SLX4Q8IY92 1834 aa24.57■■□□□ 1.52
UBE2D4-208ENST00000454350 CCDC24Q8N4L8 307 aa24.57■■□□□ 1.52
UBE2D4-208ENST00000454350 TTLL6Q8N841 843 aa24.57■■□□□ 1.52
UBE2D4-208ENST00000454350 BRIP1Q9BX63 1249 aa24.57■■□□□ 1.52
UBE2D4-208ENST00000454350 DICER1Q9UPY3 1922 aaKnown RBP24.57■■□□□ 1.52
UBE2D4-208ENST00000454350 NUP98P52948 1817 aa24.56■■□□□ 1.52
UBE2D4-208ENST00000454350 H0YIN7 160 aa24.56■■□□□ 1.52
UBE2D4-208ENST00000454350 THUMPD2Q9BTF0 503 aaKnown RBP24.56■■□□□ 1.52
UBE2D4-208ENST00000454350 NMRK2Q9NPI5 230 aa24.56■■□□□ 1.52
UBE2D4-208ENST00000454350 RASSF7Q02833 373 aa24.55■■□□□ 1.52
UBE2D4-208ENST00000454350 SETDB2Q96T68 719 aa24.55■■□□□ 1.52
UBE2D4-208ENST00000454350 RNF181Q9P0P0 153 aa24.55■■□□□ 1.52
UBE2D4-208ENST00000454350 TIAM2Q8IVF5 1701 aa24.55■■□□□ 1.52
UBE2D4-208ENST00000454350 RALBP1Q15311 655 aa24.54■■□□□ 1.52
UBE2D4-208ENST00000454350 CLEC4GQ6UXB4 293 aa24.54■■□□□ 1.52
UBE2D4-208ENST00000454350 TNRC6CQ9HCJ0 1690 aaKnown RBP24.53■■□□□ 1.52
UBE2D4-208ENST00000454350 NFKBIEO00221 500 aa24.52■■□□□ 1.52
UBE2D4-208ENST00000454350 HSPA6P17066 643 aa24.52■■□□□ 1.52
UBE2D4-208ENST00000454350 PDE6BP35913 854 aa24.52■■□□□ 1.52
UBE2D4-208ENST00000454350 EIF4A1P60842 406 aaKnown RBP24.52■■□□□ 1.52
UBE2D4-208ENST00000454350 DDX10Q13206 875 aaKnown RBP24.52■■□□□ 1.52
UBE2D4-208ENST00000454350 NPM2Q86SE8 214 aaKnown RBP24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms