RNA–Protein interactions for RNA: ENST00000453022.6

DEPDC1B-202, Transcript of DEP domain containing 1B, humanhuman

TSL 2 BASIC

Gene DEPDC1B, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-202ENST00000453022 HMOX1P09601 288 aa12.03□□□□□ -0.48
DEPDC1B-202ENST00000453022 HOXD11P31277 338 aaPredicted RBP12.03□□□□□ -0.48
DEPDC1B-202ENST00000453022 CCER1Q8TC90 406 aaPredicted RBP12.03□□□□□ -0.48
DEPDC1B-202ENST00000453022 ANKRD31Q8N7Z5 1873 aa12.03□□□□□ -0.48
DEPDC1B-202ENST00000453022 SOS1Q07889 1333 aaPredicted RBP12.03□□□□□ -0.48
DEPDC1B-202ENST00000453022 POLRMTO00411 1230 aaKnown RBP12.02□□□□□ -0.49
DEPDC1B-202ENST00000453022 TIAM2Q8IVF5 1701 aa12.02□□□□□ -0.49
DEPDC1B-202ENST00000453022 PCNTO95613 3336 aa12.02□□□□□ -0.49
DEPDC1B-202ENST00000453022 PER1O15534 1290 aaPredicted RBP12.01□□□□□ -0.49
DEPDC1B-202ENST00000453022 RNMTO43148 476 aaKnown RBP12.01□□□□□ -0.49
DEPDC1B-202ENST00000453022 CYP19A1P11511 503 aaPredicted RBP12.01□□□□□ -0.49
DEPDC1B-202ENST00000453022 TM4SF1P30408 202 aa12.01□□□□□ -0.49
DEPDC1B-202ENST00000453022 SLC39A6Q13433 755 aa12.01□□□□□ -0.49
DEPDC1B-202ENST00000453022 NMRK2Q9NPI5 230 aa12.01□□□□□ -0.49
DEPDC1B-202ENST00000453022 COL15A1P39059 1388 aa12.01□□□□□ -0.49
DEPDC1B-202ENST00000453022 CHRNA5P30532 468 aa12.01□□□□□ -0.49
DEPDC1B-202ENST00000453022 MTHFSDQ2M296 383 aaKnown RBP12.01□□□□□ -0.49
DEPDC1B-202ENST00000453022 USPL1Q5W0Q7 1092 aa12.01□□□□□ -0.49
DEPDC1B-202ENST00000453022 PIM2Q9P1W9 311 aa12.01□□□□□ -0.49
DEPDC1B-202ENST00000453022 COL11A2P13942 1736 aaPredicted RBP12□□□□□ -0.49
DEPDC1B-202ENST00000453022 DALRD3Q5D0E6 543 aaKnown RBP12□□□□□ -0.49
DEPDC1B-202ENST00000453022 IFFO2Q5TF58 517 aa12□□□□□ -0.49
DEPDC1B-202ENST00000453022 C9orf131Q5VYM1 1079 aa12□□□□□ -0.49
DEPDC1B-202ENST00000453022 ZBTB1Q9Y2K1 713 aa12□□□□□ -0.49
DEPDC1B-202ENST00000453022 CACNA1SQ13698 1873 aa11.99□□□□□ -0.49
DEPDC1B-202ENST00000453022 BCORQ6W2J9 1755 aa11.99□□□□□ -0.49
DEPDC1B-202ENST00000453022 TOMM70O94826 608 aa11.99□□□□□ -0.49
DEPDC1B-202ENST00000453022 CC2D1BQ5T0F9 858 aaKnown RBP11.99□□□□□ -0.49
DEPDC1B-202ENST00000453022 BCL2L12Q9HB09 334 aa11.99□□□□□ -0.49
DEPDC1B-202ENST00000453022 DIAPH1O60610 1272 aaKnown RBP11.98□□□□□ -0.49
DEPDC1B-202ENST00000453022 ZPR1O75312 459 aa11.98□□□□□ -0.49
DEPDC1B-202ENST00000453022 NFIXQ14938 502 aa11.98□□□□□ -0.49
DEPDC1B-202ENST00000453022 NARFQ9UHQ1 456 aa11.98□□□□□ -0.49
DEPDC1B-202ENST00000453022 CARMIL3Q8ND23 1372 aa11.97□□□□□ -0.49
DEPDC1B-202ENST00000453022 DICER1Q9UPY3 1922 aaKnown RBP11.97□□□□□ -0.49
DEPDC1B-202ENST00000453022 APLP1P51693 650 aa11.96□□□□□ -0.49
DEPDC1B-202ENST00000453022 VSIG10Q8N0Z9 540 aa11.96□□□□□ -0.49
DEPDC1B-202ENST00000453022 RNF216Q9NWF9 866 aaPredicted RBP11.96□□□□□ -0.49
DEPDC1B-202ENST00000453022 RNF181Q9P0P0 153 aa11.96□□□□□ -0.49
DEPDC1B-202ENST00000453022 FER1L6Q2WGJ9 1857 aa11.96□□□□□ -0.49
DEPDC1B-202ENST00000453022 ARFGEF2Q9Y6D5 1785 aa11.96□□□□□ -0.49
DEPDC1B-202ENST00000453022 NPC1L1Q9UHC9 1359 aa11.96□□□□□ -0.5
DEPDC1B-202ENST00000453022 RASSF7Q02833 373 aa11.95□□□□□ -0.5
DEPDC1B-202ENST00000453022 DNAJC5GQ8N7S2 189 aa11.95□□□□□ -0.5
DEPDC1B-202ENST00000453022 SERPINB2P05120 415 aa11.94□□□□□ -0.5
DEPDC1B-202ENST00000453022 CANXP27824 592 aaKnown RBP11.94□□□□□ -0.5
DEPDC1B-202ENST00000453022 PRELPP51888 382 aa11.94□□□□□ -0.5
DEPDC1B-202ENST00000453022 RBM46Q8TBY0 533 aaKnown RBP11.94□□□□□ -0.5
DEPDC1B-202ENST00000453022 HEG1Q9ULI3 1381 aa11.94□□□□□ -0.5
DEPDC1B-202ENST00000453022 KDM2BQ8NHM5 1336 aa11.93□□□□□ -0.5
DEPDC1B-202ENST00000453022 EIF5P55010 431 aaKnown RBP11.93□□□□□ -0.5
DEPDC1B-202ENST00000453022 IL17REQ8NFR9 667 aa11.93□□□□□ -0.5
DEPDC1B-202ENST00000453022 ZNF496Q96IT1 587 aaPredicted RBP11.93□□□□□ -0.5
DEPDC1B-202ENST00000453022 CNGB1Q14028 1251 aaPredicted RBP11.92□□□□□ -0.5
DEPDC1B-202ENST00000453022 TTC5Q8N0Z6 440 aa11.92□□□□□ -0.5
DEPDC1B-202ENST00000453022 CEMIPQ8WUJ3 1361 aa11.92□□□□□ -0.5
DEPDC1B-202ENST00000453022 SLX4Q8IY92 1834 aa11.92□□□□□ -0.5
DEPDC1B-202ENST00000453022 GNAT3A8MTJ3 354 aa11.92□□□□□ -0.5
DEPDC1B-202ENST00000453022 U2SURPO15042 1029 aaKnown RBP11.92□□□□□ -0.5
DEPDC1B-202ENST00000453022 HTRA3P83110 453 aa11.92□□□□□ -0.5
DEPDC1B-202ENST00000453022 ZNF790Q6PG37 636 aa11.92□□□□□ -0.5
DEPDC1B-202ENST00000453022 RRAGCQ9HB90 399 aa11.92□□□□□ -0.5
DEPDC1B-202ENST00000453022 ZC3H4Q9UPT8 1303 aaKnown RBP11.91□□□□□ -0.5
DEPDC1B-202ENST00000453022 LAMB4A4D0S4 1761 aa11.91□□□□□ -0.5
DEPDC1B-202ENST00000453022 DLG5Q8TDM6 1919 aa11.91□□□□□ -0.5
DEPDC1B-202ENST00000453022 STARD3NLO95772 234 aa11.91□□□□□ -0.5
DEPDC1B-202ENST00000453022 TEFQ10587 303 aa11.91□□□□□ -0.5
DEPDC1B-202ENST00000453022 TBC1D9BQ66K14 1250 aa11.91□□□□□ -0.5
DEPDC1B-202ENST00000453022 BICDL1Q6ZP65 573 aa11.91□□□□□ -0.5
DEPDC1B-202ENST00000453022 C2CD5Q86YS7 1000 aa11.91□□□□□ -0.5
DEPDC1B-202ENST00000453022 C16orf71Q8IYS4 520 aaPredicted RBP11.91□□□□□ -0.5
DEPDC1B-202ENST00000453022 GAS2L2Q8NHY3 880 aa11.91□□□□□ -0.5
DEPDC1B-202ENST00000453022 NFKBIEO00221 500 aa11.9□□□□□ -0.5
DEPDC1B-202ENST00000453022 LMNB1P20700 586 aa11.9□□□□□ -0.5
DEPDC1B-202ENST00000453022 FSTL1Q12841 308 aa11.9□□□□□ -0.5
DEPDC1B-202ENST00000453022 TTLL6Q8N841 843 aa11.9□□□□□ -0.5
DEPDC1B-202ENST00000453022 KCNQ3O43525 872 aa11.89□□□□□ -0.51
DEPDC1B-202ENST00000453022 PHACTR3Q96KR7 559 aa11.89□□□□□ -0.51
DEPDC1B-202ENST00000453022 RSPH6AQ9H0K4 717 aa11.89□□□□□ -0.51
DEPDC1B-202ENST00000453022 TBC1D2BQ9UPU7 963 aa11.89□□□□□ -0.51
DEPDC1B-202ENST00000453022 A0A087WZG4 1122 aa11.88□□□□□ -0.51
DEPDC1B-202ENST00000453022 H0YIN7 160 aa11.88□□□□□ -0.51
DEPDC1B-202ENST00000453022 IL6STP40189 918 aaPredicted RBP11.88□□□□□ -0.51
DEPDC1B-202ENST00000453022 PRR5LQ6MZQ0 368 aa11.88□□□□□ -0.51
DEPDC1B-202ENST00000453022 CCDC24Q8N4L8 307 aa11.88□□□□□ -0.51
DEPDC1B-202ENST00000453022 ZNF330Q9Y3S2 320 aaPredicted RBP11.88□□□□□ -0.51
DEPDC1B-202ENST00000453022 GLTPD2A6NH11 291 aa11.88□□□□□ -0.51
DEPDC1B-202ENST00000453022 CAMTA2O94983 1202 aa11.88□□□□□ -0.51
DEPDC1B-202ENST00000453022 A1BGP04217 495 aa11.88□□□□□ -0.51
DEPDC1B-202ENST00000453022 PRKAR2BP31323 418 aa11.88□□□□□ -0.51
DEPDC1B-202ENST00000453022 KLRG1Q96E93 195 aa11.88□□□□□ -0.51
DEPDC1B-202ENST00000453022 FMNL2Q96PY5 1086 aa11.88□□□□□ -0.51
DEPDC1B-202ENST00000453022 TEX13AQ9BXU3 409 aaPredicted RBP11.88□□□□□ -0.51
DEPDC1B-202ENST00000453022 KDM3BQ7LBC6 1761 aa11.87□□□□□ -0.51
DEPDC1B-202ENST00000453022 BRIP1Q9BX63 1249 aa11.87□□□□□ -0.51
DEPDC1B-202ENST00000453022 PRAMEF22A3QJZ6 481 aa11.86□□□□□ -0.51
DEPDC1B-202ENST00000453022 BTBD11A6QL63 1104 aa11.86□□□□□ -0.51
DEPDC1B-202ENST00000453022 JMYQ8N9B5 988 aa11.86□□□□□ -0.51
DEPDC1B-202ENST00000453022 SMC1BQ8NDV3 1235 aa11.86□□□□□ -0.51
DEPDC1B-202ENST00000453022 POTECB2RU33 542 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms