RNA–Protein interactions for RNA: ENST00000452104.5

PRKD3-205, Transcript of protein kinase D3, humanhuman

TSL 4

Gene PRKD3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-205ENST00000452104 CCDC85AQ96PX6 553 aaPredicted RBP7.33□□□□□ -1.24
PRKD3-205ENST00000452104 GAS2L1Q99501 681 aaPredicted RBP7.33□□□□□ -1.24
PRKD3-205ENST00000452104 DNMBPQ6XZF7 1577 aa7.33□□□□□ -1.24
PRKD3-205ENST00000452104 A0A1W2PRU2 124 aa7.32□□□□□ -1.24
PRKD3-205ENST00000452104 MYCP01106 439 aaPredicted RBP7.32□□□□□ -1.24
PRKD3-205ENST00000452104 USP4Q13107 963 aa7.32□□□□□ -1.24
PRKD3-205ENST00000452104 WDR44Q5JSH3 913 aa7.32□□□□□ -1.24
PRKD3-205ENST00000452104 SIRT1Q96EB6 747 aa7.32□□□□□ -1.24
PRKD3-205ENST00000452104 MKRN1Q9UHC7 482 aaKnown RBP7.32□□□□□ -1.24
PRKD3-205ENST00000452104 NOD1Q9Y239 953 aa7.32□□□□□ -1.24
PRKD3-205ENST00000452104 CEP164Q9UPV0 1460 aa7.31□□□□□ -1.24
PRKD3-205ENST00000452104 POU4F2Q12837 409 aa7.31□□□□□ -1.24
PRKD3-205ENST00000452104 XP32Q5T750 250 aa7.31□□□□□ -1.24
PRKD3-205ENST00000452104 CC2D2BQ6DHV5 1058 aa7.31□□□□□ -1.24
PRKD3-205ENST00000452104 LARP1Q6PKG0 1096 aaKnown RBP7.31□□□□□ -1.24
PRKD3-205ENST00000452104 TRIM50Q86XT4 487 aa7.31□□□□□ -1.24
PRKD3-205ENST00000452104 CHIC2Q9UKJ5 165 aa7.31□□□□□ -1.24
PRKD3-205ENST00000452104 URB2Q14146 1524 aaKnown RBP7.31□□□□□ -1.24
PRKD3-205ENST00000452104 OIP5O43482 229 aa7.3□□□□□ -1.24
PRKD3-205ENST00000452104 PROCP04070 461 aa7.3□□□□□ -1.24
PRKD3-205ENST00000452104 CSB-PGBD3P0DP91 1061 aa7.3□□□□□ -1.24
PRKD3-205ENST00000452104 RASA1P20936 1047 aa7.3□□□□□ -1.24
PRKD3-205ENST00000452104 MAP2K3P46734 347 aa7.3□□□□□ -1.24
PRKD3-205ENST00000452104 ERVK-9P63128 1117 aa7.3□□□□□ -1.24
PRKD3-205ENST00000452104 PSME1Q06323 249 aa7.3□□□□□ -1.24
PRKD3-205ENST00000452104 NBPF10Q6P3W6 841 aaKnown RBP7.3□□□□□ -1.24
PRKD3-205ENST00000452104 CYP2U1Q7Z449 544 aa7.3□□□□□ -1.24
PRKD3-205ENST00000452104 NBPF15Q8N660 670 aa7.3□□□□□ -1.24
PRKD3-205ENST00000452104 CDCA7Q9BWT1 371 aaPredicted RBP7.3□□□□□ -1.24
PRKD3-205ENST00000452104 WDR62O43379 1518 aa7.3□□□□□ -1.24
PRKD3-205ENST00000452104 WRNQ14191 1432 aaPredicted RBP eCLIP7.29□□□□□ -1.24
PRKD3-205ENST00000452104 SPATA31C2B4DYI2 1134 aa7.29□□□□□ -1.24
PRKD3-205ENST00000452104 ITGB2P05107 769 aa7.29□□□□□ -1.24
PRKD3-205ENST00000452104 ATP1A2P50993 1020 aa7.29□□□□□ -1.24
PRKD3-205ENST00000452104 CLN3Q13286 438 aa7.29□□□□□ -1.24
PRKD3-205ENST00000452104 KANK4Q5T7N3 995 aaPredicted RBP7.29□□□□□ -1.24
PRKD3-205ENST00000452104 ALYREFQ86V81 257 aaKnown RBP7.29□□□□□ -1.24
PRKD3-205ENST00000452104 GRIP2Q9C0E4 1043 aa7.29□□□□□ -1.24
PRKD3-205ENST00000452104 NUCKS1Q9H1E3 243 aaKnown RBP7.29□□□□□ -1.24
PRKD3-205ENST00000452104 RBM19Q9Y4C8 960 aaKnown RBP7.29□□□□□ -1.24
PRKD3-205ENST00000452104 F11P03951 625 aa7.28□□□□□ -1.24
PRKD3-205ENST00000452104 TAS1R3Q7RTX0 852 aa7.28□□□□□ -1.24
PRKD3-205ENST00000452104 OGFOD1Q8N543 542 aa7.28□□□□□ -1.24
PRKD3-205ENST00000452104 OXCT2Q9BYC2 517 aaPredicted RBP7.28□□□□□ -1.24
PRKD3-205ENST00000452104 TIMMDC1Q9NPL8 285 aa7.28□□□□□ -1.24
PRKD3-205ENST00000452104 TOPBP1Q92547 1522 aa7.27□□□□□ -1.25
PRKD3-205ENST00000452104 K7ELQ4 463 aaPredicted RBP7.27□□□□□ -1.25
PRKD3-205ENST00000452104 ATG7O95352 703 aa7.27□□□□□ -1.25
PRKD3-205ENST00000452104 PDIA4P13667 645 aaKnown RBP7.27□□□□□ -1.25
PRKD3-205ENST00000452104 GTF2IP78347 998 aa7.27□□□□□ -1.25
PRKD3-205ENST00000452104 SRPK2P78362 688 aaKnown RBP7.27□□□□□ -1.25
PRKD3-205ENST00000452104 PDE4CQ08493 712 aa7.27□□□□□ -1.25
PRKD3-205ENST00000452104 ZNF594Q96JF6 807 aaPredicted RBP7.27□□□□□ -1.25
PRKD3-205ENST00000452104 CFHR5Q9BXR6 569 aa7.27□□□□□ -1.25
PRKD3-205ENST00000452104 DNAAF2Q9NVR5 837 aaKnown RBP7.27□□□□□ -1.25
PRKD3-205ENST00000452104 MKL2Q9ULH7 1088 aa7.27□□□□□ -1.25
PRKD3-205ENST00000452104 PHF24Q9UPV7 400 aa7.27□□□□□ -1.25
PRKD3-205ENST00000452104 MRC2Q9UBG0 1479 aa7.27□□□□□ -1.25
PRKD3-205ENST00000452104 WASLO00401 505 aaPredicted RBP7.26□□□□□ -1.25
PRKD3-205ENST00000452104 RETREG2Q8NC44 543 aa7.26□□□□□ -1.25
PRKD3-205ENST00000452104 PDS5BQ9NTI5 1447 aa7.26□□□□□ -1.25
PRKD3-205ENST00000452104 FAM196BA6NMK8 535 aa7.25□□□□□ -1.25
PRKD3-205ENST00000452104 USP17L15C9J2P7 530 aa7.25□□□□□ -1.25
PRKD3-205ENST00000452104 USP17L10C9JJH3 530 aa7.25□□□□□ -1.25
PRKD3-205ENST00000452104 USP17L13C9JLJ4 530 aa7.25□□□□□ -1.25
PRKD3-205ENST00000452104 USP17L12C9JPN9 530 aa7.25□□□□□ -1.25
PRKD3-205ENST00000452104 USP17L11C9JVI0 530 aa7.25□□□□□ -1.25
PRKD3-205ENST00000452104 USP17L21D6R901 530 aa7.25□□□□□ -1.25
PRKD3-205ENST00000452104 USP17L18D6R9N7 530 aa7.25□□□□□ -1.25
PRKD3-205ENST00000452104 USP17L22D6RA61 530 aa7.25□□□□□ -1.25
PRKD3-205ENST00000452104 USP17L17D6RBQ6 530 aa7.25□□□□□ -1.25
PRKD3-205ENST00000452104 USP17L19D6RCP7 530 aa7.25□□□□□ -1.25
PRKD3-205ENST00000452104 USP17L20D6RJB6 530 aa7.25□□□□□ -1.25
PRKD3-205ENST00000452104 SCTRP47872 440 aa7.25□□□□□ -1.25
PRKD3-205ENST00000452104 USP17L24Q0WX57 530 aa7.25□□□□□ -1.25
PRKD3-205ENST00000452104 CRTC2Q53ET0 693 aaPredicted RBP7.25□□□□□ -1.25
PRKD3-205ENST00000452104 GDF2Q9UK05 429 aaPredicted RBP7.25□□□□□ -1.25
PRKD3-205ENST00000452104 NOVA2Q9UNW9 492 aaKnown RBP7.25□□□□□ -1.25
PRKD3-205ENST00000452104 TARBP1Q13395 1621 aaKnown RBP7.25□□□□□ -1.25
PRKD3-205ENST00000452104 FGD5Q6ZNL6 1462 aa7.24□□□□□ -1.25
PRKD3-205ENST00000452104 CLDN10P78369 228 aa7.24□□□□□ -1.25
PRKD3-205ENST00000452104 LARGE2Q8N3Y3 721 aa7.24□□□□□ -1.25
PRKD3-205ENST00000452104 FAM200AQ8TCP9 573 aa7.24□□□□□ -1.25
PRKD3-205ENST00000452104 ARHGEF10LQ9HCE6 1279 aa7.24□□□□□ -1.25
PRKD3-205ENST00000452104 POLA1P09884 1462 aaPredicted RBP7.24□□□□□ -1.25
PRKD3-205ENST00000452104 ABCA5Q8WWZ7 1642 aa7.23□□□□□ -1.25
PRKD3-205ENST00000452104 BAG6P46379 1132 aa7.23□□□□□ -1.25
PRKD3-205ENST00000452104 SNRPNP63162 240 aaKnown RBP7.23□□□□□ -1.25
PRKD3-205ENST00000452104 PTK7Q13308 1070 aa7.23□□□□□ -1.25
PRKD3-205ENST00000452104 CCDC102BQ68D86 513 aa7.23□□□□□ -1.25
PRKD3-205ENST00000452104 A0A1B0GTH6 734 aa7.22□□□□□ -1.25
PRKD3-205ENST00000452104 PIK3R2O00459 728 aa7.22□□□□□ -1.25
PRKD3-205ENST00000452104 GNRH1P01148 92 aa7.22□□□□□ -1.25
PRKD3-205ENST00000452104 DPYDQ12882 1025 aa7.22□□□□□ -1.25
PRKD3-205ENST00000452104 ELOAQ14241 798 aaKnown RBP7.22□□□□□ -1.25
PRKD3-205ENST00000452104 LBRQ14739 615 aaKnown RBP7.22□□□□□ -1.25
PRKD3-205ENST00000452104 ANKMY2Q8IV38 441 aa7.22□□□□□ -1.25
PRKD3-205ENST00000452104 GOLGA6L1Q8N7Z2 621 aa7.22□□□□□ -1.25
PRKD3-205ENST00000452104 TPCN2Q8NHX9 752 aa7.22□□□□□ -1.25
PRKD3-205ENST00000452104 OSBPL3Q9H4L5 887 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms