RNA–Protein interactions for RNA: ENST00000449174.1

COPS7B-213, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-213ENST00000449174 COL3A1P02461 1466 aaPredicted RBP15.68■□□□□ 0.1
COPS7B-213ENST00000449174 TOMM70O94826 608 aa15.68■□□□□ 0.1
COPS7B-213ENST00000449174 SLC39A6Q13433 755 aa15.68■□□□□ 0.1
COPS7B-213ENST00000449174 TTC5Q8N0Z6 440 aa15.68■□□□□ 0.1
COPS7B-213ENST00000449174 GAS2L2Q8NHY3 880 aa15.68■□□□□ 0.1
COPS7B-213ENST00000449174 STARD3NLO95772 234 aa15.67■□□□□ 0.1
COPS7B-213ENST00000449174 NRXN2Q9P2S2 1712 aa15.67■□□□□ 0.1
COPS7B-213ENST00000449174 TEX13AQ9BXU3 409 aaPredicted RBP15.66■□□□□ 0.1
COPS7B-213ENST00000449174 ZBTB1Q9Y2K1 713 aa15.66■□□□□ 0.1
COPS7B-213ENST00000449174 A0A087WZG4 1122 aa15.65■□□□□ 0.1
COPS7B-213ENST00000449174 GNAT3A8MTJ3 354 aa15.65■□□□□ 0.1
COPS7B-213ENST00000449174 TEFQ10587 303 aa15.65■□□□□ 0.1
COPS7B-213ENST00000449174 NFIXQ14938 502 aa15.65■□□□□ 0.1
COPS7B-213ENST00000449174 C9orf131Q5VYM1 1079 aa15.65■□□□□ 0.1
COPS7B-213ENST00000449174 KDM2BQ8NHM5 1336 aa15.65■□□□□ 0.1
COPS7B-213ENST00000449174 AFDNP55196 1824 aaKnown RBP15.64■□□□□ 0.09
COPS7B-213ENST00000449174 U2SURPO15042 1029 aaKnown RBP15.64■□□□□ 0.09
COPS7B-213ENST00000449174 APLP1P51693 650 aa15.64■□□□□ 0.09
COPS7B-213ENST00000449174 SIPA1L3O60292 1781 aaPredicted RBP15.64■□□□□ 0.09
COPS7B-213ENST00000449174 DLEC1Q9Y238 1755 aa15.64■□□□□ 0.09
COPS7B-213ENST00000449174 ZC3H4Q9UPT8 1303 aaKnown RBP15.64■□□□□ 0.09
COPS7B-213ENST00000449174 CEP350Q5VT06 3117 aa15.63■□□□□ 0.09
COPS7B-213ENST00000449174 CHRNA5P30532 468 aa15.63■□□□□ 0.09
COPS7B-213ENST00000449174 ZNF790Q6PG37 636 aa15.63■□□□□ 0.09
COPS7B-213ENST00000449174 CFAP53Q96M91 514 aa15.63■□□□□ 0.09
COPS7B-213ENST00000449174 HEG1Q9ULI3 1381 aa15.62■□□□□ 0.09
COPS7B-213ENST00000449174 SERPINB2P05120 415 aa15.62■□□□□ 0.09
COPS7B-213ENST00000449174 EIF5P55010 431 aaKnown RBP15.62■□□□□ 0.09
COPS7B-213ENST00000449174 RBM46Q8TBY0 533 aaKnown RBP15.62■□□□□ 0.09
COPS7B-213ENST00000449174 RNF181Q9P0P0 153 aa15.62■□□□□ 0.09
COPS7B-213ENST00000449174 PDZRN3Q9UPQ7 1066 aa15.62■□□□□ 0.09
COPS7B-213ENST00000449174 TNRC6CQ9HCJ0 1690 aaKnown RBP15.62■□□□□ 0.09
COPS7B-213ENST00000449174 SCN7AQ01118 1682 aa15.61■□□□□ 0.09
COPS7B-213ENST00000449174 CANXP27824 592 aaKnown RBP15.61■□□□□ 0.09
COPS7B-213ENST00000449174 C16orf71Q8IYS4 520 aaPredicted RBP15.61■□□□□ 0.09
COPS7B-213ENST00000449174 BCL2L12Q9HB09 334 aa15.61■□□□□ 0.09
COPS7B-213ENST00000449174 NMRK2Q9NPI5 230 aa15.61■□□□□ 0.09
COPS7B-213ENST00000449174 CEMIPQ8WUJ3 1361 aa15.61■□□□□ 0.09
COPS7B-213ENST00000449174 NPM2Q86SE8 214 aaKnown RBP15.6■□□□□ 0.09
COPS7B-213ENST00000449174 IL17REQ8NFR9 667 aa15.6■□□□□ 0.09
COPS7B-213ENST00000449174 ZNF496Q96IT1 587 aaPredicted RBP15.6■□□□□ 0.09
COPS7B-213ENST00000449174 FMNL2Q96PY5 1086 aa15.6■□□□□ 0.09
COPS7B-213ENST00000449174 NUDCQ9Y266 331 aa15.6■□□□□ 0.09
COPS7B-213ENST00000449174 SBF1O95248 1867 aa15.59■□□□□ 0.09
COPS7B-213ENST00000449174 H0YIN7 160 aa15.59■□□□□ 0.09
COPS7B-213ENST00000449174 IL6STP40189 918 aaPredicted RBP15.59■□□□□ 0.09
COPS7B-213ENST00000449174 TTLL6Q8N841 843 aa15.59■□□□□ 0.09
COPS7B-213ENST00000449174 FSTL1Q12841 308 aa15.58■□□□□ 0.08
COPS7B-213ENST00000449174 IFFO2Q5TF58 517 aa15.58■□□□□ 0.08
COPS7B-213ENST00000449174 CARMIL3Q8ND23 1372 aa15.58■□□□□ 0.08
COPS7B-213ENST00000449174 LMNB1P20700 586 aa15.57■□□□□ 0.08
COPS7B-213ENST00000449174 PDE6BP35913 854 aa15.57■□□□□ 0.08
COPS7B-213ENST00000449174 C2CD5Q86YS7 1000 aa15.57■□□□□ 0.08
COPS7B-213ENST00000449174 RSPH6AQ9H0K4 717 aa15.57■□□□□ 0.08
COPS7B-213ENST00000449174 BTBD11A6QL63 1104 aa15.56■□□□□ 0.08
COPS7B-213ENST00000449174 PRKAR2BP31323 418 aa15.56■□□□□ 0.08
COPS7B-213ENST00000449174 BRIP1Q9BX63 1249 aa15.56■□□□□ 0.08
COPS7B-213ENST00000449174 WDR90Q96KV7 1748 aa15.56■□□□□ 0.08
COPS7B-213ENST00000449174 CNGB1Q14028 1251 aaPredicted RBP15.55■□□□□ 0.08
COPS7B-213ENST00000449174 TBC1D9BQ66K14 1250 aa15.55■□□□□ 0.08
COPS7B-213ENST00000449174 BICDL1Q6ZP65 573 aa15.55■□□□□ 0.08
COPS7B-213ENST00000449174 BCORQ6W2J9 1755 aa15.54■□□□□ 0.08
COPS7B-213ENST00000449174 RTF1Q92541 710 aaKnown RBP15.54■□□□□ 0.08
COPS7B-213ENST00000449174 PHACTR3Q96KR7 559 aa15.54■□□□□ 0.08
COPS7B-213ENST00000449174 SETDB2Q96T68 719 aa15.54■□□□□ 0.08
COPS7B-213ENST00000449174 ZNF330Q9Y3S2 320 aaPredicted RBP15.54■□□□□ 0.08
COPS7B-213ENST00000449174 TIAM2Q8IVF5 1701 aa15.54■□□□□ 0.08
COPS7B-213ENST00000449174 ANKRD31Q8N7Z5 1873 aa15.53■□□□□ 0.08
COPS7B-213ENST00000449174 GLTPD2A6NH11 291 aa15.53■□□□□ 0.08
COPS7B-213ENST00000449174 HTATSF1O43719 755 aaKnown RBP15.53■□□□□ 0.08
COPS7B-213ENST00000449174 RASSF7Q02833 373 aa15.53■□□□□ 0.08
COPS7B-213ENST00000449174 RRAGCQ9HB90 399 aa15.53■□□□□ 0.08
COPS7B-213ENST00000449174 TBC1D2BQ9UPU7 963 aa15.53■□□□□ 0.08
COPS7B-213ENST00000449174 RGL2O15211 777 aa15.52■□□□□ 0.08
COPS7B-213ENST00000449174 U2AF1L5P0DN76 240 aaPredicted RBP15.52■□□□□ 0.08
COPS7B-213ENST00000449174 PPP2R1AP30153 589 aa15.52■□□□□ 0.08
COPS7B-213ENST00000449174 ST5P78524 1137 aa15.52■□□□□ 0.08
COPS7B-213ENST00000449174 U2AF1Q01081 240 aaKnown RBP eCLIP15.52■□□□□ 0.08
COPS7B-213ENST00000449174 PRR5LQ6MZQ0 368 aa15.52■□□□□ 0.08
COPS7B-213ENST00000449174 DNAJC5GQ8N7S2 189 aa15.52■□□□□ 0.08
COPS7B-213ENST00000449174 CNBD1Q8NA66 436 aa15.52■□□□□ 0.08
COPS7B-213ENST00000449174 SMC1BQ8NDV3 1235 aa15.52■□□□□ 0.08
COPS7B-213ENST00000449174 NPHP1O15259 732 aa15.51■□□□□ 0.07
COPS7B-213ENST00000449174 CAMTA2O94983 1202 aa15.51■□□□□ 0.07
COPS7B-213ENST00000449174 A1BGP04217 495 aa15.51■□□□□ 0.07
COPS7B-213ENST00000449174 SNRPA1P09661 255 aaKnown RBP15.51■□□□□ 0.07
COPS7B-213ENST00000449174 VEGFAP15692 232 aaPredicted RBP15.51■□□□□ 0.07
COPS7B-213ENST00000449174 CLEC4GQ6UXB4 293 aa15.51■□□□□ 0.07
COPS7B-213ENST00000449174 DZIP3Q86Y13 1208 aaKnown RBP15.51■□□□□ 0.07
COPS7B-213ENST00000449174 CNKSR1Q969H4 720 aa15.51■□□□□ 0.07
COPS7B-213ENST00000449174 ZNF652Q9Y2D9 606 aa15.51■□□□□ 0.07
COPS7B-213ENST00000449174 SOGA3Q5TF21 947 aa15.5■□□□□ 0.07
COPS7B-213ENST00000449174 ZNF622Q969S3 477 aaKnown RBP eCLIP15.5■□□□□ 0.07
COPS7B-213ENST00000449174 COL11A2P13942 1736 aaPredicted RBP15.5■□□□□ 0.07
COPS7B-213ENST00000449174 ARFGEF2Q9Y6D5 1785 aa15.49■□□□□ 0.07
COPS7B-213ENST00000449174 LTBP3Q9NS15 1303 aa15.49■□□□□ 0.07
COPS7B-213ENST00000449174 NFKBIEO00221 500 aa15.49■□□□□ 0.07
COPS7B-213ENST00000449174 KCNQ3O43525 872 aa15.49■□□□□ 0.07
COPS7B-213ENST00000449174 STYK1Q6J9G0 422 aa15.49■□□□□ 0.07
COPS7B-213ENST00000449174 DPY19L2Q6NUT2 758 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms