RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 UBR2Q8IWV8 1755 aa31.68■■■□□ 2.66
RFFL-206ENST00000447669 FLIIQ13045 1269 aa31.68■■■□□ 2.66
RFFL-206ENST00000447669 SNRPA1P09661 255 aaKnown RBP31.67■■■□□ 2.66
RFFL-206ENST00000447669 FBXO41Q8TF61 875 aa31.67■■■□□ 2.66
RFFL-206ENST00000447669 KCNQ2O43526 872 aa31.66■■■□□ 2.66
RFFL-206ENST00000447669 CACNA1FO60840 1977 aa31.66■■■□□ 2.66
RFFL-206ENST00000447669 API5Q9BZZ5 524 aaKnown RBP31.66■■■□□ 2.66
RFFL-206ENST00000447669 MS4A1P11836 297 aa31.65■■■□□ 2.66
RFFL-206ENST00000447669 ABCC4O15439 1325 aa31.65■■■□□ 2.66
RFFL-206ENST00000447669 FKBP5Q13451 457 aaPredicted RBP31.64■■■□□ 2.66
RFFL-206ENST00000447669 PDIA6Q15084 440 aa31.63■■■□□ 2.65
RFFL-206ENST00000447669 SEPT12Q8IYM1 358 aa31.63■■■□□ 2.65
RFFL-206ENST00000447669 PTPRCP08575 1304 aa31.63■■■□□ 2.65
RFFL-206ENST00000447669 PTF1AQ7RTS3 328 aa31.62■■■□□ 2.65
RFFL-206ENST00000447669 RBM42Q9BTD8 480 aaKnown RBP31.62■■■□□ 2.65
RFFL-206ENST00000447669 DBF4Q9UBU7 674 aaPredicted RBP31.62■■■□□ 2.65
RFFL-206ENST00000447669 MYL6BP14649 208 aa31.61■■■□□ 2.65
RFFL-206ENST00000447669 SLC4A10Q6U841 1118 aa31.61■■■□□ 2.65
RFFL-206ENST00000447669 EP400Q96L91 3159 aa31.6■■■□□ 2.65
RFFL-206ENST00000447669 ONECUT3O60422 494 aaPredicted RBP31.6■■■□□ 2.65
RFFL-206ENST00000447669 SLC4A9Q96Q91 983 aa31.58■■■□□ 2.65
RFFL-206ENST00000447669 DDX19BQ9UMR2 479 aa31.57■■■□□ 2.64
RFFL-206ENST00000447669 AIMP1Q12904 312 aaKnown RBP31.56■■■□□ 2.64
RFFL-206ENST00000447669 DDX21Q9NR30 783 aaKnown RBP eCLIP31.56■■■□□ 2.64
RFFL-206ENST00000447669 A1BGP04217 495 aa31.55■■■□□ 2.64
RFFL-206ENST00000447669 PCDHB15Q9Y5E8 787 aa31.55■■■□□ 2.64
RFFL-206ENST00000447669 DNAJC10Q8IXB1 793 aa31.54■■■□□ 2.64
RFFL-206ENST00000447669 LAMB4A4D0S4 1761 aa31.54■■■□□ 2.64
RFFL-206ENST00000447669 ZBTB7BO15156 539 aaPredicted RBP31.53■■■□□ 2.64
RFFL-206ENST00000447669 INTS3Q68E01 1043 aaKnown RBP31.53■■■□□ 2.64
RFFL-206ENST00000447669 PI4KAP2A4QPH2 592 aa31.53■■■□□ 2.64
RFFL-206ENST00000447669 PI4KAP1Q8N8J0 262 aa31.53■■■□□ 2.64
RFFL-206ENST00000447669 CHMP4AQ9BY43 222 aa31.53■■■□□ 2.64
RFFL-206ENST00000447669 NBPF26B4DH59 902 aa31.52■■■□□ 2.64
RFFL-206ENST00000447669 NBPF14Q5TI25 921 aa31.52■■■□□ 2.64
RFFL-206ENST00000447669 NBPF10Q6P3W6 841 aaKnown RBP31.52■■■□□ 2.64
RFFL-206ENST00000447669 NBPF15Q8N660 670 aa31.52■■■□□ 2.64
RFFL-206ENST00000447669 LRP10Q7Z4F1 713 aa31.51■■■□□ 2.64
RFFL-206ENST00000447669 C1orf115Q9H7X2 142 aa31.51■■■□□ 2.64
RFFL-206ENST00000447669 ZBTB40Q9NUA8 1239 aa31.51■■■□□ 2.64
RFFL-206ENST00000447669 HYPKQ9NX55 129 aa31.51■■■□□ 2.64
RFFL-206ENST00000447669 ZNF772Q68DY9 489 aaPredicted RBP31.51■■■□□ 2.63
RFFL-206ENST00000447669 BRWD3Q6RI45 1802 aa31.5■■■□□ 2.63
RFFL-206ENST00000447669 XAGE3Q8WTP9 111 aa31.49■■■□□ 2.63
RFFL-206ENST00000447669 ADCY9O60503 1353 aa31.49■■■□□ 2.63
RFFL-206ENST00000447669 IGHDP01880 384 aa31.49■■■□□ 2.63
RFFL-206ENST00000447669 COPS6Q7L5N1 327 aa31.48■■■□□ 2.63
RFFL-206ENST00000447669 RGS17Q9UGC6 210 aaPredicted RBP31.47■■■□□ 2.63
RFFL-206ENST00000447669 VSIG10Q8N0Z9 540 aa31.46■■■□□ 2.63
RFFL-206ENST00000447669 MAP3K2Q9Y2U5 619 aa31.46■■■□□ 2.63
RFFL-206ENST00000447669 MEIS3Q99687 375 aa31.45■■■□□ 2.63
RFFL-206ENST00000447669 KCNQ4P56696 695 aa31.44■■■□□ 2.62
RFFL-206ENST00000447669 RBM6P78332 1123 aaKnown RBP31.44■■■□□ 2.62
RFFL-206ENST00000447669 PALLDQ8WX93 1383 aa31.44■■■□□ 2.62
RFFL-206ENST00000447669 DNAAF4Q8WXU2 420 aa31.44■■■□□ 2.62
RFFL-206ENST00000447669 CCT4P50991 539 aaKnown RBP31.42■■■□□ 2.62
RFFL-206ENST00000447669 SKAP1Q86WV1 359 aa31.42■■■□□ 2.62
RFFL-206ENST00000447669 ZNF330Q9Y3S2 320 aaPredicted RBP31.42■■■□□ 2.62
RFFL-206ENST00000447669 SBF2Q86WG5 1849 aa31.42■■■□□ 2.62
RFFL-206ENST00000447669 LOC102724428A0A0B4J2F2 783 aa31.42■■■□□ 2.62
RFFL-206ENST00000447669 SIK1P57059 783 aa31.42■■■□□ 2.62
RFFL-206ENST00000447669 KSR2Q6VAB6 950 aa31.42■■■□□ 2.62
RFFL-206ENST00000447669 TJP1Q07157 1748 aa31.41■■■□□ 2.62
RFFL-206ENST00000447669 ATP6V1AP38606 617 aa31.41■■■□□ 2.62
RFFL-206ENST00000447669 KDM2BQ8NHM5 1336 aa31.41■■■□□ 2.62
RFFL-206ENST00000447669 CYP19A1P11511 503 aaPredicted RBP31.41■■■□□ 2.62
RFFL-206ENST00000447669 KRT27Q7Z3Y8 459 aa31.41■■■□□ 2.62
RFFL-206ENST00000447669 BTAF1O14981 1849 aa31.4■■■□□ 2.62
RFFL-206ENST00000447669 TTLL7Q6ZT98 887 aa31.4■■■□□ 2.62
RFFL-206ENST00000447669 ITPK1Q13572 414 aa31.39■■■□□ 2.62
RFFL-206ENST00000447669 BEND3Q5T5X7 828 aa31.39■■■□□ 2.62
RFFL-206ENST00000447669 RIC3Q7Z5B4 369 aa31.39■■■□□ 2.62
RFFL-206ENST00000447669 TEX13AQ9BXU3 409 aaPredicted RBP31.39■■■□□ 2.62
RFFL-206ENST00000447669 STARD3NLO95772 234 aa31.38■■■□□ 2.61
RFFL-206ENST00000447669 AAMPQ13685 434 aa31.38■■■□□ 2.61
RFFL-206ENST00000447669 POTEAQ6S8J7 498 aa31.38■■■□□ 2.61
RFFL-206ENST00000447669 NHSQ6T4R5 1651 aa31.38■■■□□ 2.61
RFFL-206ENST00000447669 CWF19L2Q2TBE0 894 aaKnown RBP31.37■■■□□ 2.61
RFFL-206ENST00000447669 RXRBP28702 533 aa31.36■■■□□ 2.61
RFFL-206ENST00000447669 ANKRD13DQ6ZTN6 518 aa31.36■■■□□ 2.61
RFFL-206ENST00000447669 SRCIN1Q9C0H9 1055 aa31.36■■■□□ 2.61
RFFL-206ENST00000447669 ZBTB1Q9Y2K1 713 aa31.36■■■□□ 2.61
RFFL-206ENST00000447669 ERBB4Q15303 1308 aa31.36■■■□□ 2.61
RFFL-206ENST00000447669 DDX58O95786 925 aaKnown RBP31.36■■■□□ 2.61
RFFL-206ENST00000447669 PXDNLA1KZ92 1463 aa31.34■■■□□ 2.61
RFFL-206ENST00000447669 SMARCC1Q92922 1105 aaPredicted RBP31.34■■■□□ 2.61
RFFL-206ENST00000447669 N4BP2Q86UW6 1770 aaPredicted RBP31.34■■■□□ 2.61
RFFL-206ENST00000447669 USP44Q9H0E7 712 aa31.34■■■□□ 2.61
RFFL-206ENST00000447669 CENPQQ7L2Z9 268 aaPredicted RBP31.32■■■□□ 2.6
RFFL-206ENST00000447669 SIRT2Q8IXJ6 389 aa31.32■■■□□ 2.6
RFFL-206ENST00000447669 ARXQ96QS3 562 aa31.32■■■□□ 2.6
RFFL-206ENST00000447669 MYD88Q99836 296 aa31.32■■■□□ 2.6
RFFL-206ENST00000447669 ZBTB3Q9H5J0 574 aa31.32■■■□□ 2.6
RFFL-206ENST00000447669 IGKV5-2P06315 115 aa31.31■■■□□ 2.6
RFFL-206ENST00000447669 CHMP4BQ9H444 224 aaKnown RBP31.31■■■□□ 2.6
RFFL-206ENST00000447669 MYH14Q7Z406 1995 aaKnown RBP31.3■■■□□ 2.6
RFFL-206ENST00000447669 TRIM37O94972 964 aa31.3■■■□□ 2.6
RFFL-206ENST00000447669 ARFGEF2Q9Y6D5 1785 aa31.3■■■□□ 2.6
RFFL-206ENST00000447669 NBPF7P0C2Y1 421 aaPredicted RBP31.29■■■□□ 2.6
RFFL-206ENST00000447669 CRKLP46109 303 aaKnown RBP31.29■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms