RNA–Protein interactions for RNA: ENST00000447103.5

FSCN1-204, Transcript of fascin actin-bundling protein 1, humanhuman

TSL 4

Gene FSCN1, Length 713 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FSCN1-204ENST00000447103 COL15A1P39059 1388 aa25.94■■□□□ 1.74
FSCN1-204ENST00000447103 CC2D1BQ5T0F9 858 aaKnown RBP25.93■■□□□ 1.74
FSCN1-204ENST00000447103 VSIG10Q8N0Z9 540 aa25.93■■□□□ 1.74
FSCN1-204ENST00000447103 NARFQ9UHQ1 456 aa25.93■■□□□ 1.74
FSCN1-204ENST00000447103 NRXN2Q9P2S2 1712 aa25.92■■□□□ 1.74
FSCN1-204ENST00000447103 PER1O15534 1290 aaPredicted RBP25.92■■□□□ 1.74
FSCN1-204ENST00000447103 CHRNA5P30532 468 aa25.91■■□□□ 1.74
FSCN1-204ENST00000447103 APLP1P51693 650 aa25.91■■□□□ 1.74
FSCN1-204ENST00000447103 DLEC1Q9Y238 1755 aa25.91■■□□□ 1.74
FSCN1-204ENST00000447103 NMRK2Q9NPI5 230 aa25.9■■□□□ 1.74
FSCN1-204ENST00000447103 IFFO2Q5TF58 517 aa25.89■■□□□ 1.74
FSCN1-204ENST00000447103 TTC5Q8N0Z6 440 aa25.89■■□□□ 1.74
FSCN1-204ENST00000447103 ZBTB1Q9Y2K1 713 aa25.89■■□□□ 1.74
FSCN1-204ENST00000447103 KDM2BQ8NHM5 1336 aa25.88■■□□□ 1.73
FSCN1-204ENST00000447103 C16orf71Q8IYS4 520 aaPredicted RBP25.88■■□□□ 1.73
FSCN1-204ENST00000447103 RNF181Q9P0P0 153 aa25.88■■□□□ 1.73
FSCN1-204ENST00000447103 TNRC6CQ9HCJ0 1690 aaKnown RBP25.87■■□□□ 1.73
FSCN1-204ENST00000447103 NFIXQ14938 502 aa25.87■■□□□ 1.73
FSCN1-204ENST00000447103 SIPA1L3O60292 1781 aaPredicted RBP25.87■■□□□ 1.73
FSCN1-204ENST00000447103 NPC1L1Q9UHC9 1359 aa25.86■■□□□ 1.73
FSCN1-204ENST00000447103 STARD3NLO95772 234 aa25.86■■□□□ 1.73
FSCN1-204ENST00000447103 COL3A1P02461 1466 aaPredicted RBP25.85■■□□□ 1.73
FSCN1-204ENST00000447103 U2SURPO15042 1029 aaKnown RBP25.85■■□□□ 1.73
FSCN1-204ENST00000447103 A0A087WZG4 1122 aa25.84■■□□□ 1.73
FSCN1-204ENST00000447103 SERPINB2P05120 415 aa25.84■■□□□ 1.73
FSCN1-204ENST00000447103 CANXP27824 592 aaKnown RBP25.84■■□□□ 1.73
FSCN1-204ENST00000447103 TEFQ10587 303 aa25.84■■□□□ 1.73
FSCN1-204ENST00000447103 GAS2L2Q8NHY3 880 aa25.84■■□□□ 1.73
FSCN1-204ENST00000447103 RBM46Q8TBY0 533 aaKnown RBP25.84■■□□□ 1.73
FSCN1-204ENST00000447103 WDR90Q96KV7 1748 aa25.83■■□□□ 1.73
FSCN1-204ENST00000447103 GNAT3A8MTJ3 354 aa25.83■■□□□ 1.73
FSCN1-204ENST00000447103 BCL2L12Q9HB09 334 aa25.83■■□□□ 1.73
FSCN1-204ENST00000447103 CCDC88AQ3V6T2 1871 aa25.83■■□□□ 1.72
FSCN1-204ENST00000447103 TEX13AQ9BXU3 409 aaPredicted RBP25.82■■□□□ 1.72
FSCN1-204ENST00000447103 SCN7AQ01118 1682 aa25.8■■□□□ 1.72
FSCN1-204ENST00000447103 CNGB1Q14028 1251 aaPredicted RBP25.8■■□□□ 1.72
FSCN1-204ENST00000447103 ZC3H4Q9UPT8 1303 aaKnown RBP25.8■■□□□ 1.72
FSCN1-204ENST00000447103 HEG1Q9ULI3 1381 aa25.8■■□□□ 1.72
FSCN1-204ENST00000447103 EIF5P55010 431 aaKnown RBP25.79■■□□□ 1.72
FSCN1-204ENST00000447103 FSTL1Q12841 308 aa25.79■■□□□ 1.72
FSCN1-204ENST00000447103 ZNF790Q6PG37 636 aa25.79■■□□□ 1.72
FSCN1-204ENST00000447103 TTLL6Q8N841 843 aa25.79■■□□□ 1.72
FSCN1-204ENST00000447103 H0YIN7 160 aa25.78■■□□□ 1.72
FSCN1-204ENST00000447103 C2CD5Q86YS7 1000 aa25.78■■□□□ 1.72
FSCN1-204ENST00000447103 ZNF496Q96IT1 587 aaPredicted RBP25.78■■□□□ 1.72
FSCN1-204ENST00000447103 BICDL1Q6ZP65 573 aa25.77■■□□□ 1.72
FSCN1-204ENST00000447103 IL17REQ8NFR9 667 aa25.77■■□□□ 1.72
FSCN1-204ENST00000447103 RRAGCQ9HB90 399 aa25.77■■□□□ 1.72
FSCN1-204ENST00000447103 TIAM2Q8IVF5 1701 aa25.77■■□□□ 1.72
FSCN1-204ENST00000447103 ANKRD31Q8N7Z5 1873 aa25.77■■□□□ 1.72
FSCN1-204ENST00000447103 LMNB1P20700 586 aa25.76■■□□□ 1.71
FSCN1-204ENST00000447103 RASSF7Q02833 373 aa25.76■■□□□ 1.71
FSCN1-204ENST00000447103 NPM2Q86SE8 214 aaKnown RBP25.76■■□□□ 1.71
FSCN1-204ENST00000447103 CFAP53Q96M91 514 aa25.75■■□□□ 1.71
FSCN1-204ENST00000447103 FMNL2Q96PY5 1086 aa25.75■■□□□ 1.71
FSCN1-204ENST00000447103 PDZRN3Q9UPQ7 1066 aa25.75■■□□□ 1.71
FSCN1-204ENST00000447103 ZNF330Q9Y3S2 320 aaPredicted RBP25.75■■□□□ 1.71
FSCN1-204ENST00000447103 CARMIL3Q8ND23 1372 aa25.74■■□□□ 1.71
FSCN1-204ENST00000447103 IL6STP40189 918 aaPredicted RBP25.74■■□□□ 1.71
FSCN1-204ENST00000447103 DNAJC5GQ8N7S2 189 aa25.74■■□□□ 1.71
FSCN1-204ENST00000447103 CEMIPQ8WUJ3 1361 aa25.72■■□□□ 1.71
FSCN1-204ENST00000447103 TBC1D9BQ66K14 1250 aa25.72■■□□□ 1.71
FSCN1-204ENST00000447103 DICER1Q9UPY3 1922 aaKnown RBP25.71■■□□□ 1.71
FSCN1-204ENST00000447103 PDE6BP35913 854 aa25.71■■□□□ 1.71
FSCN1-204ENST00000447103 TBC1D2BQ9UPU7 963 aa25.71■■□□□ 1.71
FSCN1-204ENST00000447103 BCORQ6W2J9 1755 aa25.71■■□□□ 1.71
FSCN1-204ENST00000447103 BTBD11A6QL63 1104 aa25.7■■□□□ 1.7
FSCN1-204ENST00000447103 PRKAR2BP31323 418 aa25.7■■□□□ 1.7
FSCN1-204ENST00000447103 SMC1BQ8NDV3 1235 aa25.7■■□□□ 1.7
FSCN1-204ENST00000447103 BRIP1Q9BX63 1249 aa25.7■■□□□ 1.7
FSCN1-204ENST00000447103 NUDCQ9Y266 331 aa25.7■■□□□ 1.7
FSCN1-204ENST00000447103 COL11A2P13942 1736 aaPredicted RBP25.7■■□□□ 1.7
FSCN1-204ENST00000447103 CACNA1SQ13698 1873 aa25.69■■□□□ 1.7
FSCN1-204ENST00000447103 FER1L6Q2WGJ9 1857 aa25.69■■□□□ 1.7
FSCN1-204ENST00000447103 GLTPD2A6NH11 291 aa25.68■■□□□ 1.7
FSCN1-204ENST00000447103 ZNF622Q969S3 477 aaKnown RBP eCLIP25.68■■□□□ 1.7
FSCN1-204ENST00000447103 RSPH6AQ9H0K4 717 aa25.68■■□□□ 1.7
FSCN1-204ENST00000447103 NPHP1O15259 732 aa25.67■■□□□ 1.7
FSCN1-204ENST00000447103 A1BGP04217 495 aa25.67■■□□□ 1.7
FSCN1-204ENST00000447103 PRR5LQ6MZQ0 368 aa25.67■■□□□ 1.7
FSCN1-204ENST00000447103 PHACTR3Q96KR7 559 aa25.67■■□□□ 1.7
FSCN1-204ENST00000447103 SETDB2Q96T68 719 aa25.67■■□□□ 1.7
FSCN1-204ENST00000447103 NFKBIEO00221 500 aa25.66■■□□□ 1.7
FSCN1-204ENST00000447103 VEGFAP15692 232 aaPredicted RBP25.66■■□□□ 1.7
FSCN1-204ENST00000447103 KLRG1Q96E93 195 aa25.66■■□□□ 1.7
FSCN1-204ENST00000447103 ARFGEF2Q9Y6D5 1785 aa25.65■■□□□ 1.7
FSCN1-204ENST00000447103 PRELPP51888 382 aa25.65■■□□□ 1.7
FSCN1-204ENST00000447103 CNBD1Q8NA66 436 aa25.65■■□□□ 1.7
FSCN1-204ENST00000447103 RTF1Q92541 710 aaKnown RBP25.65■■□□□ 1.7
FSCN1-204ENST00000447103 ST5P78524 1137 aa25.64■■□□□ 1.7
FSCN1-204ENST00000447103 CAMTA2O94983 1202 aa25.63■■□□□ 1.69
FSCN1-204ENST00000447103 HTRA3P83110 453 aa25.63■■□□□ 1.69
FSCN1-204ENST00000447103 DPY19L2Q6NUT2 758 aa25.63■■□□□ 1.69
FSCN1-204ENST00000447103 DZIP3Q86Y13 1208 aaKnown RBP25.63■■□□□ 1.69
FSCN1-204ENST00000447103 KCNQ3O43525 872 aa25.62■■□□□ 1.69
FSCN1-204ENST00000447103 C21orf2O43822 256 aa25.62■■□□□ 1.69
FSCN1-204ENST00000447103 U2AF1L5P0DN76 240 aaPredicted RBP25.62■■□□□ 1.69
FSCN1-204ENST00000447103 U2AF1Q01081 240 aaKnown RBP eCLIP25.62■■□□□ 1.69
FSCN1-204ENST00000447103 CCDC24Q8N4L8 307 aa25.62■■□□□ 1.69
FSCN1-204ENST00000447103 CNKSR1Q969H4 720 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms