RNA–Protein interactions for RNA: ENST00000446921.6

SIK3-205, Transcript of SIK family kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIK3, Length 3,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-205ENST00000446921 ZSWIM4Q9H7M6 989 aa18.61■□□□□ 0.57
SIK3-205ENST00000446921 PAIP2Q9BPZ3 127 aaKnown RBP18.6■□□□□ 0.57
SIK3-205ENST00000446921 LRRC8AQ8IWT6 810 aa18.6■□□□□ 0.57
SIK3-205ENST00000446921 TERF2IPQ9NYB0 399 aa18.6■□□□□ 0.57
SIK3-205ENST00000446921 PTPRCP08575 1304 aa18.59■□□□□ 0.57
SIK3-205ENST00000446921 CT47B1P0C2W7 299 aaPredicted RBP18.59■□□□□ 0.57
SIK3-205ENST00000446921 DHX8Q14562 1220 aaKnown RBP18.59■□□□□ 0.57
SIK3-205ENST00000446921 TSHZ3Q63HK5 1081 aa18.59■□□□□ 0.57
SIK3-205ENST00000446921 CARD6Q9BX69 1037 aa18.59■□□□□ 0.57
SIK3-205ENST00000446921 DACT1Q9NYF0 836 aa18.59■□□□□ 0.57
SIK3-205ENST00000446921 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.59■□□□□ 0.575e-9■■□□□ 11.4
SIK3-205ENST00000446921 KIAA0586Q9BVV6 1533 aa18.59■□□□□ 0.57
SIK3-205ENST00000446921 MAGI2Q86UL8 1455 aa18.59■□□□□ 0.57
SIK3-205ENST00000446921 TCOF1Q13428 1488 aaKnown RBP18.59■□□□□ 0.57
SIK3-205ENST00000446921 ISM2Q6H9L7 571 aa18.59■□□□□ 0.57
SIK3-205ENST00000446921 CPSF2Q9P2I0 782 aaKnown RBP18.59■□□□□ 0.57
SIK3-205ENST00000446921 EVCP57679 992 aa18.58■□□□□ 0.57
SIK3-205ENST00000446921 SNAPC4Q5SXM2 1469 aa18.58■□□□□ 0.57
SIK3-205ENST00000446921 NEMFO60524 1076 aa18.58■□□□□ 0.56
SIK3-205ENST00000446921 LIG1P18858 919 aa18.58■□□□□ 0.56
SIK3-205ENST00000446921 FMNL2Q96PY5 1086 aa18.58■□□□□ 0.56
SIK3-205ENST00000446921 CTTNBP2Q8WZ74 1663 aa18.58■□□□□ 0.56
SIK3-205ENST00000446921 LRRN4CLQ8ND94 238 aa18.58■□□□□ 0.56
SIK3-205ENST00000446921 SRRTQ9BXP5 876 aaKnown RBP18.58■□□□□ 0.56
SIK3-205ENST00000446921 TFIP11Q9UBB9 837 aaKnown RBP18.58■□□□□ 0.56
SIK3-205ENST00000446921 IRAK4Q9NWZ3 460 aa18.57■□□□□ 0.56
SIK3-205ENST00000446921 INTS4Q96HW7 963 aaKnown RBP18.57■□□□□ 0.56
SIK3-205ENST00000446921 RAI14Q9P0K7 980 aa18.57■□□□□ 0.56
SIK3-205ENST00000446921 TAOK2Q9UL54 1235 aa18.57■□□□□ 0.56
SIK3-205ENST00000446921 SYT1P21579 422 aa18.57■□□□□ 0.56
SIK3-205ENST00000446921 TTC19Q6DKK2 380 aaPredicted RBP18.57■□□□□ 0.56
SIK3-205ENST00000446921 GBP6Q6ZN66 633 aa18.57■□□□□ 0.56
SIK3-205ENST00000446921 F13A1P00488 732 aa18.56■□□□□ 0.56
SIK3-205ENST00000446921 MMS22LQ6ZRQ5 1243 aa18.56■□□□□ 0.56
SIK3-205ENST00000446921 NFATC2IPQ8NCF5 419 aa18.56■□□□□ 0.56
SIK3-205ENST00000446921 PPP1R12AO14974 1030 aaPredicted RBP18.56■□□□□ 0.56
SIK3-205ENST00000446921 KRT85P78386 507 aa18.56■□□□□ 0.56
SIK3-205ENST00000446921 CWC27Q6UX04 472 aaKnown RBP18.56■□□□□ 0.56
SIK3-205ENST00000446921 RAD50Q92878 1312 aa18.55■□□□□ 0.56
SIK3-205ENST00000446921 H2AFXP16104 143 aaPredicted RBP18.55■□□□□ 0.56
SIK3-205ENST00000446921 FAM173BQ6P4H8 233 aa18.55■□□□□ 0.56
SIK3-205ENST00000446921 PALD1Q9ULE6 856 aa18.55■□□□□ 0.56
SIK3-205ENST00000446921 LIG3P49916 1009 aa18.55■□□□□ 0.56
SIK3-205ENST00000446921 CCDC83Q8IWF9 413 aa18.55■□□□□ 0.56
SIK3-205ENST00000446921 MED4Q9NPJ6 270 aa18.55■□□□□ 0.56
SIK3-205ENST00000446921 PRAG1Q86YV5 1406 aa18.54■□□□□ 0.56
SIK3-205ENST00000446921 ZBTB7BO15156 539 aaPredicted RBP18.54■□□□□ 0.56
SIK3-205ENST00000446921 EXOC4Q96A65 974 aa18.54■□□□□ 0.56
SIK3-205ENST00000446921 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.53■□□□□ 0.56
SIK3-205ENST00000446921 STAG3Q9UJ98 1225 aa18.53■□□□□ 0.56
SIK3-205ENST00000446921 CEBPZQ03701 1054 aaKnown RBP18.53■□□□□ 0.56
SIK3-205ENST00000446921 FOXR1Q6PIV2 292 aa18.53■□□□□ 0.56
SIK3-205ENST00000446921 SFPQP23246 707 aaKnown RBP eCLIP18.53■□□□□ 0.563e-7■■■□□ 17.4
SIK3-205ENST00000446921 ASXL1Q8IXJ9 1541 aa18.52■□□□□ 0.56
SIK3-205ENST00000446921 ATAD2Q6PL18 1390 aa18.52■□□□□ 0.56
SIK3-205ENST00000446921 ANAPC15P60006 121 aa18.52■□□□□ 0.56
SIK3-205ENST00000446921 ORC3Q9UBD5 711 aaPredicted RBP18.52■□□□□ 0.56
SIK3-205ENST00000446921 CENPHQ9H3R5 247 aa18.52■□□□□ 0.55
SIK3-205ENST00000446921 NBPF6Q5VWK0 638 aa18.51■□□□□ 0.55
SIK3-205ENST00000446921 AP1ARQ63HQ0 302 aa18.51■□□□□ 0.55
SIK3-205ENST00000446921 NBPF5PQ86XG9 351 aaPredicted RBP18.51■□□□□ 0.55
SIK3-205ENST00000446921 NBPF4Q96M43 638 aa18.51■□□□□ 0.55
SIK3-205ENST00000446921 EIF3JO75822 258 aaKnown RBP18.51■□□□□ 0.55
SIK3-205ENST00000446921 SPATA32Q96LK8 384 aa18.51■□□□□ 0.55
SIK3-205ENST00000446921 CCDC196A0A1B0GTZ2 297 aa18.51■□□□□ 0.55
SIK3-205ENST00000446921 ERLIN2O94905 339 aa18.51■□□□□ 0.55
SIK3-205ENST00000446921 TMPOP42166 694 aaKnown RBP18.51■□□□□ 0.55
SIK3-205ENST00000446921 ARHGAP31Q2M1Z3 1444 aa18.51■□□□□ 0.55
SIK3-205ENST00000446921 PPIP5K1Q6PFW1 1433 aa18.51■□□□□ 0.55
SIK3-205ENST00000446921 CDK13Q14004 1512 aaKnown RBP18.51■□□□□ 0.55
SIK3-205ENST00000446921 ECM2O94769 699 aaPredicted RBP18.5■□□□□ 0.55
SIK3-205ENST00000446921 CUL4AQ13619 759 aa18.5■□□□□ 0.55
SIK3-205ENST00000446921 DDX54Q8TDD1 881 aaKnown RBP18.5■□□□□ 0.55
SIK3-205ENST00000446921 RABEP2Q9H5N1 569 aa18.5■□□□□ 0.55
SIK3-205ENST00000446921 HNRNPMP52272 730 aaKnown RBP eCLIP18.5■□□□□ 0.559e-7■■■■■ 27.5
SIK3-205ENST00000446921 POLA1P09884 1462 aaPredicted RBP18.5■□□□□ 0.55
SIK3-205ENST00000446921 CCDC141Q6ZP82 1450 aa18.5■□□□□ 0.55
SIK3-205ENST00000446921 NF2P35240 595 aa18.5■□□□□ 0.55
SIK3-205ENST00000446921 TMC6Q7Z403 805 aa18.5■□□□□ 0.55
SIK3-205ENST00000446921 FAM53CQ9NYF3 392 aa18.5■□□□□ 0.55
SIK3-205ENST00000446921 CCDC30Q5VVM6 783 aa18.49■□□□□ 0.55
SIK3-205ENST00000446921 LARP1BQ659C4 914 aaKnown RBP18.49■□□□□ 0.55
SIK3-205ENST00000446921 SIRT2Q8IXJ6 389 aa18.49■□□□□ 0.55
SIK3-205ENST00000446921 JPH2Q9BR39 696 aaPredicted RBP18.49■□□□□ 0.55
SIK3-205ENST00000446921 CARD14Q9BXL6 1004 aa18.49■□□□□ 0.55
SIK3-205ENST00000446921 GJB2P29033 226 aa18.49■□□□□ 0.55
SIK3-205ENST00000446921 ACBD3Q9H3P7 528 aa18.49■□□□□ 0.55
SIK3-205ENST00000446921 PDE11AQ9HCR9 933 aa18.49■□□□□ 0.55
SIK3-205ENST00000446921 HMGB1P09429 215 aaKnown RBP18.49■□□□□ 0.55
SIK3-205ENST00000446921 NBPF9Q3BBW0 867 aa18.48■□□□□ 0.55
SIK3-205ENST00000446921 ABCC2Q92887 1545 aa18.48■□□□□ 0.55
SIK3-205ENST00000446921 SCP2P22307 547 aa18.48■□□□□ 0.55
SIK3-205ENST00000446921 FUCA2Q9BTY2 467 aa18.48■□□□□ 0.55
SIK3-205ENST00000446921 NUCKS1Q9H1E3 243 aaKnown RBP18.48■□□□□ 0.55
SIK3-205ENST00000446921 ELP1O95163 1332 aa18.48■□□□□ 0.55
SIK3-205ENST00000446921 NAIF1Q69YI7 327 aaPredicted RBP18.48■□□□□ 0.55
SIK3-205ENST00000446921 NYAP1Q6ZVC0 841 aa18.47■□□□□ 0.55
SIK3-205ENST00000446921 PLEKHG2Q9H7P9 1386 aa18.47■□□□□ 0.55
SIK3-205ENST00000446921 PRDM2Q13029 1718 aa18.47■□□□□ 0.55
SIK3-205ENST00000446921 GRIN2BQ13224 1484 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms