RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 TJP1Q07157 1748 aa33.04■■■□□ 2.88
PMS1-214ENST00000446877 ARFGEF1Q9Y6D6 1849 aa33.03■■■□□ 2.88
PMS1-214ENST00000446877 VSIG10Q8N0Z9 540 aa33.03■■■□□ 2.88
PMS1-214ENST00000446877 ZBTB1Q9Y2K1 713 aa33.03■■■□□ 2.88
PMS1-214ENST00000446877 COL15A1P39059 1388 aa33.02■■■□□ 2.88
PMS1-214ENST00000446877 SERPINB2P05120 415 aa33.02■■■□□ 2.88
PMS1-214ENST00000446877 MTHFSDQ2M296 383 aaKnown RBP33.02■■■□□ 2.88
PMS1-214ENST00000446877 DIAPH1O60610 1272 aaKnown RBP33■■■□□ 2.87
PMS1-214ENST00000446877 SCN11AQ9UI33 1791 aa32.99■■■□□ 2.87
PMS1-214ENST00000446877 CANXP27824 592 aaKnown RBP32.99■■■□□ 2.87
PMS1-214ENST00000446877 HTRA3P83110 453 aa32.99■■■□□ 2.87
PMS1-214ENST00000446877 CCER1Q8TC90 406 aaPredicted RBP32.99■■■□□ 2.87
PMS1-214ENST00000446877 KLRG1Q96E93 195 aa32.99■■■□□ 2.87
PMS1-214ENST00000446877 ZC3H4Q9UPT8 1303 aaKnown RBP32.99■■■□□ 2.87
PMS1-214ENST00000446877 STARD3NLO95772 234 aa32.98■■■□□ 2.87
PMS1-214ENST00000446877 LMNB1P20700 586 aa32.98■■■□□ 2.87
PMS1-214ENST00000446877 RASSF7Q02833 373 aa32.98■■■□□ 2.87
PMS1-214ENST00000446877 TTC5Q8N0Z6 440 aa32.98■■■□□ 2.87
PMS1-214ENST00000446877 TTLL6Q8N841 843 aa32.98■■■□□ 2.87
PMS1-214ENST00000446877 H0YIN7 160 aa32.97■■■□□ 2.87
PMS1-214ENST00000446877 C2CD5Q86YS7 1000 aa32.97■■■□□ 2.87
PMS1-214ENST00000446877 SMC1BQ8NDV3 1235 aa32.97■■■□□ 2.87
PMS1-214ENST00000446877 BCL2L12Q9HB09 334 aa32.97■■■□□ 2.87
PMS1-214ENST00000446877 MRC1P22897 1456 aa32.95■■■□□ 2.87
PMS1-214ENST00000446877 A0A087WZG4 1122 aa32.95■■■□□ 2.87
PMS1-214ENST00000446877 BICDL1Q6ZP65 573 aa32.94■■■□□ 2.86
PMS1-214ENST00000446877 ADAMTS7Q9UKP4 1686 aa32.93■■■□□ 2.86
PMS1-214ENST00000446877 VEGFAP15692 232 aaPredicted RBP32.92■■■□□ 2.86
PMS1-214ENST00000446877 CC2D1BQ5T0F9 858 aaKnown RBP32.92■■■□□ 2.86
PMS1-214ENST00000446877 KIF7Q2M1P5 1343 aa32.92■■■□□ 2.86
PMS1-214ENST00000446877 GLTPD2A6NH11 291 aa32.91■■■□□ 2.86
PMS1-214ENST00000446877 EIF5P55010 431 aaKnown RBP32.9■■■□□ 2.86
PMS1-214ENST00000446877 TEFQ10587 303 aa32.9■■■□□ 2.86
PMS1-214ENST00000446877 JMYQ8N9B5 988 aa32.9■■■□□ 2.86
PMS1-214ENST00000446877 TEX13AQ9BXU3 409 aaPredicted RBP32.89■■■□□ 2.86
PMS1-214ENST00000446877 WDR90Q96KV7 1748 aa32.88■■■□□ 2.85
PMS1-214ENST00000446877 PDZRN3Q9UPQ7 1066 aa32.87■■■□□ 2.85
PMS1-214ENST00000446877 U2SURPO15042 1029 aaKnown RBP32.86■■■□□ 2.85
PMS1-214ENST00000446877 PER1O15534 1290 aaPredicted RBP32.86■■■□□ 2.85
PMS1-214ENST00000446877 NPM2Q86SE8 214 aaKnown RBP32.86■■■□□ 2.85
PMS1-214ENST00000446877 ZNF622Q969S3 477 aaKnown RBP eCLIP32.86■■■□□ 2.85
PMS1-214ENST00000446877 ZNF330Q9Y3S2 320 aaPredicted RBP32.86■■■□□ 2.85
PMS1-214ENST00000446877 GNAT3A8MTJ3 354 aa32.85■■■□□ 2.85
PMS1-214ENST00000446877 PRELPP51888 382 aa32.85■■■□□ 2.85
PMS1-214ENST00000446877 GAS2L2Q8NHY3 880 aa32.85■■■□□ 2.85
PMS1-214ENST00000446877 ZNF496Q96IT1 587 aaPredicted RBP32.85■■■□□ 2.85
PMS1-214ENST00000446877 PDE6BP35913 854 aa32.84■■■□□ 2.85
PMS1-214ENST00000446877 TBC1D9BQ66K14 1250 aa32.84■■■□□ 2.85
PMS1-214ENST00000446877 ZNF790Q6PG37 636 aa32.84■■■□□ 2.85
PMS1-214ENST00000446877 BRIP1Q9BX63 1249 aa32.84■■■□□ 2.85
PMS1-214ENST00000446877 NFKBIEO00221 500 aa32.83■■■□□ 2.85
PMS1-214ENST00000446877 DPY19L2Q6NUT2 758 aa32.83■■■□□ 2.85
PMS1-214ENST00000446877 CARMIL3Q8ND23 1372 aa32.83■■■□□ 2.85
PMS1-214ENST00000446877 TNRC6CQ9HCJ0 1690 aaKnown RBP32.82■■■□□ 2.84
PMS1-214ENST00000446877 IL17REQ8NFR9 667 aa32.82■■■□□ 2.84
PMS1-214ENST00000446877 TBC1D2BQ9UPU7 963 aa32.82■■■□□ 2.84
PMS1-214ENST00000446877 SBF1O95248 1867 aa32.82■■■□□ 2.84
PMS1-214ENST00000446877 HEG1Q9ULI3 1381 aa32.81■■■□□ 2.84
PMS1-214ENST00000446877 NRXN2Q9P2S2 1712 aa32.8■■■□□ 2.84
PMS1-214ENST00000446877 AFDNP55196 1824 aaKnown RBP32.8■■■□□ 2.84
PMS1-214ENST00000446877 NPHP1O15259 732 aa32.8■■■□□ 2.84
PMS1-214ENST00000446877 IL6STP40189 918 aaPredicted RBP32.8■■■□□ 2.84
PMS1-214ENST00000446877 CNGB1Q14028 1251 aaPredicted RBP32.8■■■□□ 2.84
PMS1-214ENST00000446877 ZNF219Q9P2Y4 722 aaPredicted RBP32.8■■■□□ 2.84
PMS1-214ENST00000446877 COL13A1Q5TAT6 717 aaPredicted RBP32.79■■■□□ 2.84
PMS1-214ENST00000446877 FMNL2Q96PY5 1086 aa32.79■■■□□ 2.84
PMS1-214ENST00000446877 C21orf2O43822 256 aa32.78■■■□□ 2.84
PMS1-214ENST00000446877 SETDB2Q96T68 719 aa32.78■■■□□ 2.84
PMS1-214ENST00000446877 PRR5LQ6MZQ0 368 aa32.77■■■□□ 2.84
PMS1-214ENST00000446877 CCDC24Q8N4L8 307 aa32.77■■■□□ 2.84
PMS1-214ENST00000446877 ERFEQ4G0M1 354 aa32.76■■■□□ 2.83
PMS1-214ENST00000446877 PCNTO95613 3336 aa32.76■■■□□ 2.83
PMS1-214ENST00000446877 A1BGP04217 495 aa32.74■■■□□ 2.83
PMS1-214ENST00000446877 CNBD1Q8NA66 436 aa32.74■■■□□ 2.83
PMS1-214ENST00000446877 BTBD11A6QL63 1104 aa32.72■■■□□ 2.83
PMS1-214ENST00000446877 ST5P78524 1137 aa32.72■■■□□ 2.83
PMS1-214ENST00000446877 CNKSR1Q969H4 720 aa32.72■■■□□ 2.83
PMS1-214ENST00000446877 UBR2Q8IWV8 1755 aa32.71■■■□□ 2.83
PMS1-214ENST00000446877 TAOK3Q9H2K8 898 aa32.71■■■□□ 2.83
PMS1-214ENST00000446877 POTECB2RU33 542 aa32.7■■■□□ 2.83
PMS1-214ENST00000446877 DLEC1Q9Y238 1755 aa32.7■■■□□ 2.82
PMS1-214ENST00000446877 NPC1L1Q9UHC9 1359 aa32.7■■■□□ 2.82
PMS1-214ENST00000446877 CAMTA2O94983 1202 aa32.69■■■□□ 2.82
PMS1-214ENST00000446877 STYK1Q6J9G0 422 aa32.69■■■□□ 2.82
PMS1-214ENST00000446877 TNS4Q8IZW8 715 aa32.69■■■□□ 2.82
PMS1-214ENST00000446877 SOGA3Q5TF21 947 aa32.68■■■□□ 2.82
PMS1-214ENST00000446877 DZIP3Q86Y13 1208 aaKnown RBP32.68■■■□□ 2.82
PMS1-214ENST00000446877 CFAP53Q96M91 514 aa32.67■■■□□ 2.82
PMS1-214ENST00000446877 LTBP3Q9NS15 1303 aa32.67■■■□□ 2.82
PMS1-214ENST00000446877 COL3A1P02461 1466 aaPredicted RBP32.67■■■□□ 2.82
PMS1-214ENST00000446877 VIRMAQ69YN4 1812 aaKnown RBP32.66■■■□□ 2.82
PMS1-214ENST00000446877 KCNQ3O43525 872 aa32.66■■■□□ 2.82
PMS1-214ENST00000446877 MASTLQ96GX5 879 aa32.66■■■□□ 2.82
PMS1-214ENST00000446877 SRGNP10124 158 aa32.65■■■□□ 2.82
PMS1-214ENST00000446877 PRKAR2BP31323 418 aa32.65■■■□□ 2.82
PMS1-214ENST00000446877 PRPF40BQ6NWY9 871 aaKnown RBP32.65■■■□□ 2.82
PMS1-214ENST00000446877 PHACTR3Q96KR7 559 aa32.65■■■□□ 2.82
PMS1-214ENST00000446877 CEMIPQ8WUJ3 1361 aa32.65■■■□□ 2.82
PMS1-214ENST00000446877 CAPN15O75808 1086 aa32.63■■■□□ 2.81
PMS1-214ENST00000446877 HSPA1AP0DMV8 641 aaKnown RBP32.63■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms