RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 PRAMEF22A3QJZ6 481 aa19.55■□□□□ 0.72
HDAC4-204ENST00000446876 KLHL34Q8N239 644 aa19.54■□□□□ 0.72
HDAC4-204ENST00000446876 MRS2Q9HD23 443 aa19.54■□□□□ 0.72
HDAC4-204ENST00000446876 SOS1Q07889 1333 aaPredicted RBP19.53■□□□□ 0.72
HDAC4-204ENST00000446876 LAMB4A4D0S4 1761 aa19.53■□□□□ 0.72
HDAC4-204ENST00000446876 ADRA2BP18089 450 aa19.53■□□□□ 0.72
HDAC4-204ENST00000446876 SRP68Q9UHB9 627 aaKnown RBP19.53■□□□□ 0.72
HDAC4-204ENST00000446876 CANXP27824 592 aaKnown RBP19.52■□□□□ 0.72
HDAC4-204ENST00000446876 RFC4P35249 363 aa19.52■□□□□ 0.72
HDAC4-204ENST00000446876 TRIM35Q9UPQ4 493 aa19.52■□□□□ 0.72
HDAC4-204ENST00000446876 SENP3-EIF4A1A0A087X0R7 540 aa19.51■□□□□ 0.71
HDAC4-204ENST00000446876 STARD3NLO95772 234 aa19.51■□□□□ 0.71
HDAC4-204ENST00000446876 LMOD3Q0VAK6 560 aa19.51■□□□□ 0.71
HDAC4-204ENST00000446876 SYT17Q9BSW7 474 aa19.51■□□□□ 0.71
HDAC4-204ENST00000446876 COL15A1P39059 1388 aa19.51■□□□□ 0.71
HDAC4-204ENST00000446876 APAF1O14727 1248 aa19.5■□□□□ 0.71
HDAC4-204ENST00000446876 GYS1P13807 737 aa19.5■□□□□ 0.71
HDAC4-204ENST00000446876 USP16Q9Y5T5 823 aa19.5■□□□□ 0.71
HDAC4-204ENST00000446876 USP42Q9H9J4 1324 aaKnown RBP19.5■□□□□ 0.71
HDAC4-204ENST00000446876 A1BGP04217 495 aa19.49■□□□□ 0.71
HDAC4-204ENST00000446876 PIP4K2AP48426 406 aaPredicted RBP19.49■□□□□ 0.71
HDAC4-204ENST00000446876 PNISRQ8TF01 805 aaKnown RBP19.49■□□□□ 0.71
HDAC4-204ENST00000446876 TEX13AQ9BXU3 409 aaPredicted RBP19.49■□□□□ 0.71
HDAC4-204ENST00000446876 SNRPA1P09661 255 aaKnown RBP19.48■□□□□ 0.71
HDAC4-204ENST00000446876 TSPYL4Q9UJ04 414 aa19.48■□□□□ 0.71
HDAC4-204ENST00000446876 ZNF330Q9Y3S2 320 aaPredicted RBP19.48■□□□□ 0.71
HDAC4-204ENST00000446876 MMP10P09238 476 aa19.47■□□□□ 0.71
HDAC4-204ENST00000446876 EIF4A1P60842 406 aaKnown RBP19.47■□□□□ 0.71
HDAC4-204ENST00000446876 SCN7AQ01118 1682 aa19.46■□□□□ 0.71
HDAC4-204ENST00000446876 EIF5P55010 431 aaKnown RBP19.46■□□□□ 0.71
HDAC4-204ENST00000446876 FKBP8Q14318 412 aa19.46■□□□□ 0.71
HDAC4-204ENST00000446876 USPL1Q5W0Q7 1092 aa19.46■□□□□ 0.71
HDAC4-204ENST00000446876 NLGN2Q8NFZ4 835 aa19.46■□□□□ 0.71
HDAC4-204ENST00000446876 NLGN1Q8N2Q7 840 aa19.45■□□□□ 0.7
HDAC4-204ENST00000446876 LAS1LQ9Y4W2 734 aaKnown RBP19.45■□□□□ 0.7
HDAC4-204ENST00000446876 ZPR1O75312 459 aa19.44■□□□□ 0.7
HDAC4-204ENST00000446876 NARFQ9UHQ1 456 aa19.44■□□□□ 0.7
HDAC4-204ENST00000446876 BCORQ6W2J9 1755 aa19.44■□□□□ 0.7
HDAC4-204ENST00000446876 GIGYF1O75420 1035 aaPredicted RBP19.43■□□□□ 0.7
HDAC4-204ENST00000446876 BCL2L12Q9HB09 334 aa19.43■□□□□ 0.7
HDAC4-204ENST00000446876 NBPF26B4DH59 902 aa19.42■□□□□ 0.7
HDAC4-204ENST00000446876 IL6STP40189 918 aaPredicted RBP19.42■□□□□ 0.7
HDAC4-204ENST00000446876 NBPF10Q6P3W6 841 aaKnown RBP19.42■□□□□ 0.7
HDAC4-204ENST00000446876 NBPF15Q8N660 670 aa19.42■□□□□ 0.7
HDAC4-204ENST00000446876 TBC1D2BQ9UPU7 963 aa19.42■□□□□ 0.7
HDAC4-204ENST00000446876 KIF13BQ9NQT8 1826 aa19.41■□□□□ 0.7
HDAC4-204ENST00000446876 DDR1Q08345 913 aa19.41■□□□□ 0.7
HDAC4-204ENST00000446876 AFDNP55196 1824 aaKnown RBP19.41■□□□□ 0.7
HDAC4-204ENST00000446876 KIAA1551Q9HCM1 1747 aa19.4■□□□□ 0.7
HDAC4-204ENST00000446876 A0A087WZG4 1122 aa19.4■□□□□ 0.7
HDAC4-204ENST00000446876 CHL1O00533 1208 aa19.4■□□□□ 0.7
HDAC4-204ENST00000446876 KRT24Q2M2I5 525 aa19.4■□□□□ 0.7
HDAC4-204ENST00000446876 FAM9BQ8IZU0 186 aa19.4■□□□□ 0.7
HDAC4-204ENST00000446876 BABAM1Q9NWV8 329 aa19.4■□□□□ 0.7
HDAC4-204ENST00000446876 PARP3Q9Y6F1 533 aa19.39■□□□□ 0.69
HDAC4-204ENST00000446876 N4BP2Q86UW6 1770 aaPredicted RBP19.39■□□□□ 0.69
HDAC4-204ENST00000446876 NFIXQ14938 502 aa19.38■□□□□ 0.69
HDAC4-204ENST00000446876 C10orf71Q711Q0 1435 aa19.38■□□□□ 0.69
HDAC4-204ENST00000446876 CD2APQ9Y5K6 639 aa19.38■□□□□ 0.69
HDAC4-204ENST00000446876 POLRMTO00411 1230 aaKnown RBP19.37■□□□□ 0.69
HDAC4-204ENST00000446876 CAMTA2O94983 1202 aa19.37■□□□□ 0.69
HDAC4-204ENST00000446876 TM4SF1P30408 202 aa19.37■□□□□ 0.69
HDAC4-204ENST00000446876 BICDL1Q6ZP65 573 aa19.37■□□□□ 0.69
HDAC4-204ENST00000446876 NPM2Q86SE8 214 aaKnown RBP19.37■□□□□ 0.69
HDAC4-204ENST00000446876 DZIP3Q86Y13 1208 aaKnown RBP19.37■□□□□ 0.69
HDAC4-204ENST00000446876 PELP1Q8IZL8 1130 aaKnown RBP19.37■□□□□ 0.69
HDAC4-204ENST00000446876 EIF2S2P20042 333 aaKnown RBP19.36■□□□□ 0.69
HDAC4-204ENST00000446876 NGEFQ8N5V2 710 aa19.36■□□□□ 0.69
HDAC4-204ENST00000446876 CFAP44Q96MT7 982 aa19.36■□□□□ 0.69
HDAC4-204ENST00000446876 MBIPQ9NS73 344 aa19.36■□□□□ 0.69
HDAC4-204ENST00000446876 WWC3Q9ULE0 1092 aa19.36■□□□□ 0.69
HDAC4-204ENST00000446876 NRXN2Q9P2S2 1712 aa19.36■□□□□ 0.69
HDAC4-204ENST00000446876 MYL6BP14649 208 aa19.35■□□□□ 0.69
HDAC4-204ENST00000446876 TBC1D9BQ66K14 1250 aa19.35■□□□□ 0.69
HDAC4-204ENST00000446876 NECTIN2Q92692 538 aa19.35■□□□□ 0.69
HDAC4-204ENST00000446876 SALL2Q9Y467 1007 aaPredicted RBP19.35■□□□□ 0.69
HDAC4-204ENST00000446876 ZNF853P0CG23 659 aa19.34■□□□□ 0.69
HDAC4-204ENST00000446876 IFT57Q9NWB7 429 aa19.34■□□□□ 0.69
HDAC4-204ENST00000446876 PXDNLA1KZ92 1463 aa19.34■□□□□ 0.69
HDAC4-204ENST00000446876 DCAF8L1A6NGE4 600 aa19.33■□□□□ 0.68
HDAC4-204ENST00000446876 ANXA1P04083 346 aa19.33■□□□□ 0.68
HDAC4-204ENST00000446876 GNAI1P63096 354 aa19.32■□□□□ 0.68
HDAC4-204ENST00000446876 CALD1Q05682 793 aaKnown RBP19.32■□□□□ 0.68
HDAC4-204ENST00000446876 GPR162Q16538 588 aa19.32■□□□□ 0.68
HDAC4-204ENST00000446876 PROSER3Q2NL68 480 aa19.32■□□□□ 0.68
HDAC4-204ENST00000446876 WWC1Q8IX03 1113 aa19.32■□□□□ 0.68
HDAC4-204ENST00000446876 NUP98P52948 1817 aa19.32■□□□□ 0.68
HDAC4-204ENST00000446876 SERPINB2P05120 415 aa19.31■□□□□ 0.68
HDAC4-204ENST00000446876 YBX3P16989 372 aaKnown RBP eCLIP19.31■□□□□ 0.68
HDAC4-204ENST00000446876 PDIA6Q15084 440 aa19.31■□□□□ 0.68
HDAC4-204ENST00000446876 CCDC27Q2M243 656 aa19.31■□□□□ 0.68
HDAC4-204ENST00000446876 TTLL7Q6ZT98 887 aa19.31■□□□□ 0.68
HDAC4-204ENST00000446876 CARMIL3Q8ND23 1372 aa19.31■□□□□ 0.68
HDAC4-204ENST00000446876 BRCA1P38398 1863 aaKnown RBP19.31■□□□□ 0.68
HDAC4-204ENST00000446876 HLFQ16534 295 aa19.3■□□□□ 0.68
HDAC4-204ENST00000446876 ANKRD31Q8N7Z5 1873 aa19.3■□□□□ 0.68
HDAC4-204ENST00000446876 ERBB4Q15303 1308 aa19.29■□□□□ 0.68
HDAC4-204ENST00000446876 A0A0G2JLW4 131 aa19.29■□□□□ 0.68
HDAC4-204ENST00000446876 DUSP27Q5VZP5 1158 aa19.29■□□□□ 0.68
HDAC4-204ENST00000446876 LRP10Q7Z4F1 713 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms