RNA–Protein interactions for RNA: ENST00000446833.1

SDCCAG3-206, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 3

Gene SDCCAG3, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-206ENST00000446833 GAS2L2Q8NHY3 880 aa23.16■■□□□ 1.3
SDCCAG3-206ENST00000446833 ZBTB1Q9Y2K1 713 aa23.16■■□□□ 1.3
SDCCAG3-206ENST00000446833 ARFGEF1Q9Y6D6 1849 aa23.16■■□□□ 1.3
SDCCAG3-206ENST00000446833 COL3A1P02461 1466 aaPredicted RBP23.16■■□□□ 1.3
SDCCAG3-206ENST00000446833 STARD3NLO95772 234 aa23.15■■□□□ 1.3
SDCCAG3-206ENST00000446833 VIRMAQ69YN4 1812 aaKnown RBP23.15■■□□□ 1.3
SDCCAG3-206ENST00000446833 GNAT3A8MTJ3 354 aa23.14■■□□□ 1.29
SDCCAG3-206ENST00000446833 U2SURPO15042 1029 aaKnown RBP23.14■■□□□ 1.29
SDCCAG3-206ENST00000446833 NFIXQ14938 502 aa23.14■■□□□ 1.29
SDCCAG3-206ENST00000446833 C9orf131Q5VYM1 1079 aa23.14■■□□□ 1.29
SDCCAG3-206ENST00000446833 TOMM70O94826 608 aa23.13■■□□□ 1.29
SDCCAG3-206ENST00000446833 CHRNA5P30532 468 aa23.13■■□□□ 1.29
SDCCAG3-206ENST00000446833 TEFQ10587 303 aa23.13■■□□□ 1.29
SDCCAG3-206ENST00000446833 TEX13AQ9BXU3 409 aaPredicted RBP23.13■■□□□ 1.29
SDCCAG3-206ENST00000446833 A0A087WZG4 1122 aa23.11■■□□□ 1.29
SDCCAG3-206ENST00000446833 ZNF790Q6PG37 636 aa23.11■■□□□ 1.29
SDCCAG3-206ENST00000446833 IL17REQ8NFR9 667 aa23.11■■□□□ 1.29
SDCCAG3-206ENST00000446833 UBR2Q8IWV8 1755 aa23.11■■□□□ 1.29
SDCCAG3-206ENST00000446833 CANXP27824 592 aaKnown RBP23.1■■□□□ 1.29
SDCCAG3-206ENST00000446833 EIF5P55010 431 aaKnown RBP23.1■■□□□ 1.29
SDCCAG3-206ENST00000446833 BCL2L12Q9HB09 334 aa23.1■■□□□ 1.29
SDCCAG3-206ENST00000446833 SERPINB2P05120 415 aa23.09■■□□□ 1.29
SDCCAG3-206ENST00000446833 ZNF496Q96IT1 587 aaPredicted RBP23.09■■□□□ 1.29
SDCCAG3-206ENST00000446833 CFAP53Q96M91 514 aa23.09■■□□□ 1.29
SDCCAG3-206ENST00000446833 CNGB1Q14028 1251 aaPredicted RBP23.08■■□□□ 1.29
SDCCAG3-206ENST00000446833 NMRK2Q9NPI5 230 aa23.08■■□□□ 1.29
SDCCAG3-206ENST00000446833 HEG1Q9ULI3 1381 aa23.08■■□□□ 1.29
SDCCAG3-206ENST00000446833 APLP1P51693 650 aa23.07■■□□□ 1.28
SDCCAG3-206ENST00000446833 RNF181Q9P0P0 153 aa23.07■■□□□ 1.28
SDCCAG3-206ENST00000446833 NRXN2Q9P2S2 1712 aa23.07■■□□□ 1.28
SDCCAG3-206ENST00000446833 KDM2BQ8NHM5 1336 aa23.07■■□□□ 1.28
SDCCAG3-206ENST00000446833 CEMIPQ8WUJ3 1361 aa23.06■■□□□ 1.28
SDCCAG3-206ENST00000446833 AFDNP55196 1824 aaKnown RBP23.05■■□□□ 1.28
SDCCAG3-206ENST00000446833 FMNL2Q96PY5 1086 aa23.05■■□□□ 1.28
SDCCAG3-206ENST00000446833 NUDCQ9Y266 331 aa23.05■■□□□ 1.28
SDCCAG3-206ENST00000446833 IL6STP40189 918 aaPredicted RBP23.04■■□□□ 1.28
SDCCAG3-206ENST00000446833 TTLL6Q8N841 843 aa23.04■■□□□ 1.28
SDCCAG3-206ENST00000446833 RBM46Q8TBY0 533 aaKnown RBP23.04■■□□□ 1.28
SDCCAG3-206ENST00000446833 RSPH6AQ9H0K4 717 aa23.04■■□□□ 1.28
SDCCAG3-206ENST00000446833 ZC3H4Q9UPT8 1303 aaKnown RBP23.04■■□□□ 1.28
SDCCAG3-206ENST00000446833 H0YIN7 160 aa23.03■■□□□ 1.28
SDCCAG3-206ENST00000446833 PRKAR2BP31323 418 aa23.03■■□□□ 1.28
SDCCAG3-206ENST00000446833 C16orf71Q8IYS4 520 aaPredicted RBP23.03■■□□□ 1.28
SDCCAG3-206ENST00000446833 PHACTR3Q96KR7 559 aa23.03■■□□□ 1.28
SDCCAG3-206ENST00000446833 PDZRN3Q9UPQ7 1066 aa23.03■■□□□ 1.28
SDCCAG3-206ENST00000446833 NPM2Q86SE8 214 aaKnown RBP23.02■■□□□ 1.28
SDCCAG3-206ENST00000446833 C2CD5Q86YS7 1000 aa23.02■■□□□ 1.28
SDCCAG3-206ENST00000446833 SIPA1L3O60292 1781 aaPredicted RBP23.01■■□□□ 1.27
SDCCAG3-206ENST00000446833 BTBD11A6QL63 1104 aa23.01■■□□□ 1.27
SDCCAG3-206ENST00000446833 BICDL1Q6ZP65 573 aa23.01■■□□□ 1.27
SDCCAG3-206ENST00000446833 SBF1O95248 1867 aa23■■□□□ 1.27
SDCCAG3-206ENST00000446833 LMNB1P20700 586 aa23■■□□□ 1.27
SDCCAG3-206ENST00000446833 TBC1D9BQ66K14 1250 aa23■■□□□ 1.27
SDCCAG3-206ENST00000446833 TBC1D2BQ9UPU7 963 aa23■■□□□ 1.27
SDCCAG3-206ENST00000446833 FSTL1Q12841 308 aa22.99■■□□□ 1.27
SDCCAG3-206ENST00000446833 BRIP1Q9BX63 1249 aa22.99■■□□□ 1.27
SDCCAG3-206ENST00000446833 PDE6BP35913 854 aa22.98■■□□□ 1.27
SDCCAG3-206ENST00000446833 IFFO2Q5TF58 517 aa22.98■■□□□ 1.27
SDCCAG3-206ENST00000446833 ZNF330Q9Y3S2 320 aaPredicted RBP22.98■■□□□ 1.27
SDCCAG3-206ENST00000446833 DLEC1Q9Y238 1755 aa22.98■■□□□ 1.27
SDCCAG3-206ENST00000446833 CARMIL3Q8ND23 1372 aa22.98■■□□□ 1.27
SDCCAG3-206ENST00000446833 A1BGP04217 495 aa22.97■■□□□ 1.27
SDCCAG3-206ENST00000446833 U2AF1L5P0DN76 240 aaPredicted RBP22.97■■□□□ 1.27
SDCCAG3-206ENST00000446833 PPP2R1AP30153 589 aa22.97■■□□□ 1.27
SDCCAG3-206ENST00000446833 U2AF1Q01081 240 aaKnown RBP eCLIP22.97■■□□□ 1.27
SDCCAG3-206ENST00000446833 RASSF7Q02833 373 aa22.97■■□□□ 1.27
SDCCAG3-206ENST00000446833 RTF1Q92541 710 aaKnown RBP22.97■■□□□ 1.27
SDCCAG3-206ENST00000446833 DNAJC5GQ8N7S2 189 aa22.96■■□□□ 1.27
SDCCAG3-206ENST00000446833 SETDB2Q96T68 719 aa22.96■■□□□ 1.27
SDCCAG3-206ENST00000446833 RRAGCQ9HB90 399 aa22.96■■□□□ 1.27
SDCCAG3-206ENST00000446833 KCNQ3O43525 872 aa22.95■■□□□ 1.26
SDCCAG3-206ENST00000446833 HTATSF1O43719 755 aaKnown RBP22.95■■□□□ 1.26
SDCCAG3-206ENST00000446833 CAMTA2O94983 1202 aa22.95■■□□□ 1.26
SDCCAG3-206ENST00000446833 SCN7AQ01118 1682 aa22.95■■□□□ 1.26
SDCCAG3-206ENST00000446833 PRR5LQ6MZQ0 368 aa22.95■■□□□ 1.26
SDCCAG3-206ENST00000446833 GLTPD2A6NH11 291 aa22.93■■□□□ 1.26
SDCCAG3-206ENST00000446833 SNRPA1P09661 255 aaKnown RBP22.93■■□□□ 1.26
SDCCAG3-206ENST00000446833 ZNF622Q969S3 477 aaKnown RBP eCLIP22.93■■□□□ 1.26
SDCCAG3-206ENST00000446833 USP16Q9Y5T5 823 aa22.93■■□□□ 1.26
SDCCAG3-206ENST00000446833 TNRC6CQ9HCJ0 1690 aaKnown RBP22.93■■□□□ 1.26
SDCCAG3-206ENST00000446833 PRELPP51888 382 aa22.92■■□□□ 1.26
SDCCAG3-206ENST00000446833 CLEC4GQ6UXB4 293 aa22.92■■□□□ 1.26
SDCCAG3-206ENST00000446833 MCM10Q7L590 875 aa22.92■■□□□ 1.26
SDCCAG3-206ENST00000446833 DZIP3Q86Y13 1208 aaKnown RBP22.92■■□□□ 1.26
SDCCAG3-206ENST00000446833 CNBD1Q8NA66 436 aa22.92■■□□□ 1.26
SDCCAG3-206ENST00000446833 NFKBIEO00221 500 aa22.91■■□□□ 1.26
SDCCAG3-206ENST00000446833 NPHP1O15259 732 aa22.9■■□□□ 1.26
SDCCAG3-206ENST00000446833 VEGFAP15692 232 aaPredicted RBP22.9■■□□□ 1.26
SDCCAG3-206ENST00000446833 ST5P78524 1137 aa22.9■■□□□ 1.26
SDCCAG3-206ENST00000446833 SMC1BQ8NDV3 1235 aa22.9■■□□□ 1.26
SDCCAG3-206ENST00000446833 ANKRD31Q8N7Z5 1873 aa22.9■■□□□ 1.26
SDCCAG3-206ENST00000446833 RGL2O15211 777 aa22.89■■□□□ 1.25
SDCCAG3-206ENST00000446833 CNKSR1Q969H4 720 aa22.89■■□□□ 1.25
SDCCAG3-206ENST00000446833 ZNF652Q9Y2D9 606 aa22.89■■□□□ 1.25
SDCCAG3-206ENST00000446833 C21orf2O43822 256 aa22.88■■□□□ 1.25
SDCCAG3-206ENST00000446833 STYK1Q6J9G0 422 aa22.88■■□□□ 1.25
SDCCAG3-206ENST00000446833 TAF7Q15545 349 aaPredicted RBP22.87■■□□□ 1.25
SDCCAG3-206ENST00000446833 DPY19L2Q6NUT2 758 aa22.87■■□□□ 1.25
SDCCAG3-206ENST00000446833 CCDC24Q8N4L8 307 aa22.87■■□□□ 1.25
SDCCAG3-206ENST00000446833 LTBP3Q9NS15 1303 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms