RNA–Protein interactions for RNA: ENST00000444987.1

LRRC42-204, Transcript of leucine rich repeat containing 42, humanhuman

TSL 5

Gene LRRC42, Length 1,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-204ENST00000444987 KDM3BQ7LBC6 1761 aa24.93■■□□□ 1.58
LRRC42-204ENST00000444987 SOS1Q07889 1333 aaPredicted RBP24.92■■□□□ 1.58
LRRC42-204ENST00000444987 SNRPA1P09661 255 aaKnown RBP24.9■■□□□ 1.58
LRRC42-204ENST00000444987 GYS1P13807 737 aa24.9■■□□□ 1.58
LRRC42-204ENST00000444987 BABAM1Q9NWV8 329 aa24.9■■□□□ 1.58
LRRC42-204ENST00000444987 USP42Q9H9J4 1324 aaKnown RBP24.89■■□□□ 1.58
LRRC42-204ENST00000444987 KCNQ3O43525 872 aa24.89■■□□□ 1.58
LRRC42-204ENST00000444987 ZBTB1Q9Y2K1 713 aa24.89■■□□□ 1.58
LRRC42-204ENST00000444987 CD2APQ9Y5K6 639 aa24.89■■□□□ 1.58
LRRC42-204ENST00000444987 COL15A1P39059 1388 aa24.88■■□□□ 1.57
LRRC42-204ENST00000444987 A0A087WZG4 1122 aa24.87■■□□□ 1.57
LRRC42-204ENST00000444987 CCDC146Q8IYE0 955 aa24.87■■□□□ 1.57
LRRC42-204ENST00000444987 ZPR1O75312 459 aa24.86■■□□□ 1.57
LRRC42-204ENST00000444987 EIF5P55010 431 aaKnown RBP24.86■■□□□ 1.57
LRRC42-204ENST00000444987 MMP10P09238 476 aa24.85■■□□□ 1.57
LRRC42-204ENST00000444987 IL6STP40189 918 aaPredicted RBP24.85■■□□□ 1.57
LRRC42-204ENST00000444987 NARFQ9UHQ1 456 aa24.85■■□□□ 1.57
LRRC42-204ENST00000444987 LAMB4A4D0S4 1761 aa24.85■■□□□ 1.57
LRRC42-204ENST00000444987 CANXP27824 592 aaKnown RBP24.84■■□□□ 1.57
LRRC42-204ENST00000444987 THUMPD2Q9BTF0 503 aaKnown RBP24.84■■□□□ 1.57
LRRC42-204ENST00000444987 KLHL34Q8N239 644 aa24.83■■□□□ 1.57
LRRC42-204ENST00000444987 USP16Q9Y5T5 823 aa24.83■■□□□ 1.57
LRRC42-204ENST00000444987 MIS18AQ9NYP9 233 aa24.82■■□□□ 1.56
LRRC42-204ENST00000444987 SRP68Q9UHB9 627 aaKnown RBP24.82■■□□□ 1.56
LRRC42-204ENST00000444987 KIF13BQ9NQT8 1826 aa24.82■■□□□ 1.56
LRRC42-204ENST00000444987 EIF4A1P60842 406 aaKnown RBP24.81■■□□□ 1.56
LRRC42-204ENST00000444987 NPM2Q86SE8 214 aaKnown RBP24.81■■□□□ 1.56
LRRC42-204ENST00000444987 PARP3Q9Y6F1 533 aa24.81■■□□□ 1.56
LRRC42-204ENST00000444987 A1BGP04217 495 aa24.8■■□□□ 1.56
LRRC42-204ENST00000444987 NEUROD2Q15784 382 aa24.8■■□□□ 1.56
LRRC42-204ENST00000444987 USPL1Q5W0Q7 1092 aa24.8■■□□□ 1.56
LRRC42-204ENST00000444987 TSPYL4Q9UJ04 414 aa24.8■■□□□ 1.56
LRRC42-204ENST00000444987 TRIM35Q9UPQ4 493 aa24.8■■□□□ 1.56
LRRC42-204ENST00000444987 RRP7AQ9Y3A4 280 aaKnown RBP24.8■■□□□ 1.56
LRRC42-204ENST00000444987 GIGYF1O75420 1035 aaPredicted RBP24.79■■□□□ 1.56
LRRC42-204ENST00000444987 FKBP8Q14318 412 aa24.79■■□□□ 1.56
LRRC42-204ENST00000444987 TM4SF1P30408 202 aa24.78■■□□□ 1.56
LRRC42-204ENST00000444987 CCDC184Q52MB2 194 aa24.78■■□□□ 1.56
LRRC42-204ENST00000444987 MRS2Q9HD23 443 aa24.78■■□□□ 1.56
LRRC42-204ENST00000444987 SCN7AQ01118 1682 aa24.78■■□□□ 1.56
LRRC42-204ENST00000444987 NLGN2Q8NFZ4 835 aa24.77■■□□□ 1.56
LRRC42-204ENST00000444987 PRAMEF22A3QJZ6 481 aa24.76■■□□□ 1.55
LRRC42-204ENST00000444987 APAF1O14727 1248 aa24.76■■□□□ 1.55
LRRC42-204ENST00000444987 RGL2O15211 777 aa24.76■■□□□ 1.55
LRRC42-204ENST00000444987 C10orf71Q711Q0 1435 aa24.76■■□□□ 1.55
LRRC42-204ENST00000444987 CHL1O00533 1208 aa24.75■■□□□ 1.55
LRRC42-204ENST00000444987 CALD1Q05682 793 aaKnown RBP24.75■■□□□ 1.55
LRRC42-204ENST00000444987 TGFB2P61812 414 aa24.74■■□□□ 1.55
LRRC42-204ENST00000444987 NCBP3Q53F19 620 aaKnown RBP24.74■■□□□ 1.55
LRRC42-204ENST00000444987 BCL2L12Q9HB09 334 aa24.74■■□□□ 1.55
LRRC42-204ENST00000444987 ERBB4Q15303 1308 aa24.74■■□□□ 1.55
LRRC42-204ENST00000444987 BCORQ6W2J9 1755 aa24.74■■□□□ 1.55
LRRC42-204ENST00000444987 NRXN2Q9P2S2 1712 aa24.72■■□□□ 1.55
LRRC42-204ENST00000444987 POLRMTO00411 1230 aaKnown RBP24.72■■□□□ 1.55
LRRC42-204ENST00000444987 GPR162Q16538 588 aa24.72■■□□□ 1.55
LRRC42-204ENST00000444987 ZNF330Q9Y3S2 320 aaPredicted RBP24.72■■□□□ 1.55
LRRC42-204ENST00000444987 DDR1Q08345 913 aa24.71■■□□□ 1.55
LRRC42-204ENST00000444987 NFIXQ14938 502 aa24.71■■□□□ 1.55
LRRC42-204ENST00000444987 DZIP3Q86Y13 1208 aaKnown RBP24.71■■□□□ 1.55
LRRC42-204ENST00000444987 CFAP44Q96MT7 982 aa24.71■■□□□ 1.55
LRRC42-204ENST00000444987 TBC1D2BQ9UPU7 963 aa24.71■■□□□ 1.55
LRRC42-204ENST00000444987 NBPF26B4DH59 902 aa24.7■■□□□ 1.54
LRRC42-204ENST00000444987 NBPF10Q6P3W6 841 aaKnown RBP24.7■■□□□ 1.54
LRRC42-204ENST00000444987 CLEC4GQ6UXB4 293 aa24.7■■□□□ 1.54
LRRC42-204ENST00000444987 NBPF15Q8N660 670 aa24.7■■□□□ 1.54
LRRC42-204ENST00000444987 KIAA1551Q9HCM1 1747 aa24.69■■□□□ 1.54
LRRC42-204ENST00000444987 GRIN3BO60391 1043 aa24.69■■□□□ 1.54
LRRC42-204ENST00000444987 CAMTA2O94983 1202 aa24.69■■□□□ 1.54
LRRC42-204ENST00000444987 CCDC27Q2M243 656 aa24.69■■□□□ 1.54
LRRC42-204ENST00000444987 AFDNP55196 1824 aaKnown RBP24.68■■□□□ 1.54
LRRC42-204ENST00000444987 ZNF652Q9Y2D9 606 aa24.68■■□□□ 1.54
LRRC42-204ENST00000444987 PXDNLA1KZ92 1463 aa24.67■■□□□ 1.54
LRRC42-204ENST00000444987 HOXB7P09629 217 aa24.67■■□□□ 1.54
LRRC42-204ENST00000444987 IFT57Q9NWB7 429 aa24.67■■□□□ 1.54
LRRC42-204ENST00000444987 CHD4Q14839 1912 aa24.67■■□□□ 1.54
LRRC42-204ENST00000444987 ZNF853P0CG23 659 aa24.66■■□□□ 1.54
LRRC42-204ENST00000444987 GNAI1P63096 354 aa24.66■■□□□ 1.54
LRRC42-204ENST00000444987 LAS1LQ9Y4W2 734 aaKnown RBP24.66■■□□□ 1.54
LRRC42-204ENST00000444987 SERPINB2P05120 415 aa24.65■■□□□ 1.54
LRRC42-204ENST00000444987 PIP4K2AP48426 406 aaPredicted RBP24.65■■□□□ 1.54
LRRC42-204ENST00000444987 CARMIL3Q8ND23 1372 aa24.65■■□□□ 1.54
LRRC42-204ENST00000444987 TBC1D9BQ66K14 1250 aa24.64■■□□□ 1.54
LRRC42-204ENST00000444987 PELP1Q8IZL8 1130 aaKnown RBP24.64■■□□□ 1.54
LRRC42-204ENST00000444987 N4BP2Q86UW6 1770 aaPredicted RBP24.64■■□□□ 1.53
LRRC42-204ENST00000444987 ERVV-1B6SEH8 477 aa24.63■■□□□ 1.53
LRRC42-204ENST00000444987 SETDB2Q96T68 719 aa24.63■■□□□ 1.53
LRRC42-204ENST00000444987 BRCA1P38398 1863 aaKnown RBP24.62■■□□□ 1.53
LRRC42-204ENST00000444987 YBX3P16989 372 aaKnown RBP eCLIP24.62■■□□□ 1.535e-8■□□□□ 10.5
LRRC42-204ENST00000444987 NGEFQ8N5V2 710 aa24.62■■□□□ 1.53
LRRC42-204ENST00000444987 MBIPQ9NS73 344 aa24.61■■□□□ 1.53
LRRC42-204ENST00000444987 KIF6Q6ZMV9 814 aa24.6■■□□□ 1.53
LRRC42-204ENST00000444987 BICDL1Q6ZP65 573 aa24.6■■□□□ 1.53
LRRC42-204ENST00000444987 PDZRN3Q9UPQ7 1066 aa24.6■■□□□ 1.53
LRRC42-204ENST00000444987 A0A0G2JLW4 131 aa24.59■■□□□ 1.53
LRRC42-204ENST00000444987 DPEP1P16444 411 aa24.59■■□□□ 1.53
LRRC42-204ENST00000444987 EIF2S2P20042 333 aaKnown RBP24.59■■□□□ 1.53
LRRC42-204ENST00000444987 YY1P25490 414 aa24.59■■□□□ 1.53
LRRC42-204ENST00000444987 WWC1Q8IX03 1113 aa24.59■■□□□ 1.53
LRRC42-204ENST00000444987 CHMP4AQ9BY43 222 aa24.59■■□□□ 1.53
LRRC42-204ENST00000444987 IL16Q14005 1332 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms