RNA–Protein interactions for RNA: ENST00000444172.6

CIRBP-203, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-203ENST00000444172 FANCIQ9NVI1 1328 aa23.2■■□□□ 1.3
CIRBP-203ENST00000444172 PSDA5PKW4 1024 aaPredicted RBP23.2■■□□□ 1.3
CIRBP-203ENST00000444172 GNPATO15228 680 aa23.2■■□□□ 1.3
CIRBP-203ENST00000444172 EIF2S2P20042 333 aaKnown RBP23.2■■□□□ 1.3
CIRBP-203ENST00000444172 RC3H1Q5TC82 1133 aaKnown RBP23.2■■□□□ 1.3
CIRBP-203ENST00000444172 CDCA7LQ96GN5 454 aa23.2■■□□□ 1.3
CIRBP-203ENST00000444172 CNTNAP4Q9C0A0 1308 aa23.19■■□□□ 1.3
CIRBP-203ENST00000444172 E9PSI1 815 aa23.19■■□□□ 1.3
CIRBP-203ENST00000444172 DUSP27Q5VZP5 1158 aa23.19■■□□□ 1.3
CIRBP-203ENST00000444172 CCDC87Q9NVE4 849 aa23.19■■□□□ 1.3
CIRBP-203ENST00000444172 MYH14Q7Z406 1995 aaKnown RBP23.19■■□□□ 1.3
CIRBP-203ENST00000444172 PHF14O94880 888 aa23.18■■□□□ 1.3
CIRBP-203ENST00000444172 A1BGP04217 495 aa23.18■■□□□ 1.3
CIRBP-203ENST00000444172 CANXP27824 592 aaKnown RBP23.18■■□□□ 1.3
CIRBP-203ENST00000444172 SLFN5Q08AF3 891 aa23.18■■□□□ 1.3
CIRBP-203ENST00000444172 INTS5Q6P9B9 1019 aaKnown RBP23.18■■□□□ 1.3
CIRBP-203ENST00000444172 SMIM5Q71RC9 77 aa23.18■■□□□ 1.3
CIRBP-203ENST00000444172 C8orf58Q8NAV2 365 aa23.18■■□□□ 1.3
CIRBP-203ENST00000444172 NECTIN2Q92692 538 aa23.18■■□□□ 1.3
CIRBP-203ENST00000444172 YTHDC1Q96MU7 727 aaKnown RBP23.18■■□□□ 1.3
CIRBP-203ENST00000444172 RTCBQ9Y3I0 505 aaKnown RBP23.18■■□□□ 1.3
CIRBP-203ENST00000444172 MSH5O43196 834 aa23.17■■□□□ 1.3
CIRBP-203ENST00000444172 ZBTB1Q9Y2K1 713 aa23.17■■□□□ 1.3
CIRBP-203ENST00000444172 PIP4K2AP48426 406 aaPredicted RBP23.16■■□□□ 1.3
CIRBP-203ENST00000444172 EXOSC9Q06265 439 aaKnown RBP23.16■■□□□ 1.3
CIRBP-203ENST00000444172 ZNF330Q9Y3S2 320 aaPredicted RBP23.16■■□□□ 1.3
CIRBP-203ENST00000444172 LAMB4A4D0S4 1761 aa23.16■■□□□ 1.3
CIRBP-203ENST00000444172 TUBGCP6Q96RT7 1819 aa23.15■■□□□ 1.3
CIRBP-203ENST00000444172 ZBED9Q6R2W3 1325 aa23.15■■□□□ 1.3
CIRBP-203ENST00000444172 RPS6KA4O75676 772 aa23.15■■□□□ 1.3
CIRBP-203ENST00000444172 TSPYL6Q8N831 410 aa23.15■■□□□ 1.3
CIRBP-203ENST00000444172 UBR3Q6ZT12 1888 aa23.15■■□□□ 1.3
CIRBP-203ENST00000444172 TWISTNBQ3B726 338 aaPredicted RBP23.14■■□□□ 1.29
CIRBP-203ENST00000444172 AMIGO3Q86WK7 504 aa23.14■■□□□ 1.29
CIRBP-203ENST00000444172 PNPLA7Q6ZV29 1317 aa23.13■■□□□ 1.29
CIRBP-203ENST00000444172 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.13■■□□□ 1.29
CIRBP-203ENST00000444172 HOXB7P09629 217 aa23.13■■□□□ 1.29
CIRBP-203ENST00000444172 TRAPPC3LQ5T215 181 aa23.13■■□□□ 1.29
CIRBP-203ENST00000444172 HDGFL1Q5TGJ6 251 aa23.13■■□□□ 1.29
CIRBP-203ENST00000444172 NPM2Q86SE8 214 aaKnown RBP23.13■■□□□ 1.29
CIRBP-203ENST00000444172 SSFA2P28290 1259 aa23.12■■□□□ 1.29
CIRBP-203ENST00000444172 FLAD1Q8NFF5 587 aa23.12■■□□□ 1.29
CIRBP-203ENST00000444172 MYL6BP14649 208 aa23.11■■□□□ 1.29
CIRBP-203ENST00000444172 COL23A1Q86Y22 540 aaPredicted RBP23.11■■□□□ 1.29
CIRBP-203ENST00000444172 ARXQ96QS3 562 aa23.11■■□□□ 1.29
CIRBP-203ENST00000444172 QSER1Q2KHR3 1735 aa23.11■■□□□ 1.29
CIRBP-203ENST00000444172 NBPF26B4DH59 902 aa23.1■■□□□ 1.29
CIRBP-203ENST00000444172 NBPF10Q6P3W6 841 aaKnown RBP23.1■■□□□ 1.29
CIRBP-203ENST00000444172 NBPF15Q8N660 670 aa23.1■■□□□ 1.29
CIRBP-203ENST00000444172 ARHGEF1Q92888 912 aaKnown RBP23.1■■□□□ 1.29
CIRBP-203ENST00000444172 PDGFDQ9GZP0 370 aaPredicted RBP23.1■■□□□ 1.29
CIRBP-203ENST00000444172 SOS1Q07889 1333 aaPredicted RBP23.09■■□□□ 1.29
CIRBP-203ENST00000444172 RFC4P35249 363 aa23.09■■□□□ 1.29
CIRBP-203ENST00000444172 IL6STP40189 918 aaPredicted RBP23.09■■□□□ 1.29
CIRBP-203ENST00000444172 TRMT2AQ8IZ69 625 aaKnown RBP23.09■■□□□ 1.29
CIRBP-203ENST00000444172 VAMP4O75379 141 aa23.08■■□□□ 1.29
CIRBP-203ENST00000444172 ANXA1P04083 346 aa23.08■■□□□ 1.29
CIRBP-203ENST00000444172 EIF5P55010 431 aaKnown RBP23.08■■□□□ 1.29
CIRBP-203ENST00000444172 COL15A1P39059 1388 aa23.07■■□□□ 1.28
CIRBP-203ENST00000444172 TCERG1O14776 1098 aaKnown RBP23.07■■□□□ 1.28
CIRBP-203ENST00000444172 ADRA2BP18089 450 aa23.07■■□□□ 1.28
CIRBP-203ENST00000444172 CCDC30Q5VVM6 783 aa23.07■■□□□ 1.28
CIRBP-203ENST00000444172 CHMP4AQ9BY43 222 aa23.07■■□□□ 1.28
CIRBP-203ENST00000444172 CHPF2Q9P2E5 772 aa23.07■■□□□ 1.28
CIRBP-203ENST00000444172 ERBB4Q15303 1308 aa23.07■■□□□ 1.28
CIRBP-203ENST00000444172 A0A087WZG4 1122 aa23.06■■□□□ 1.28
CIRBP-203ENST00000444172 ZPR1O75312 459 aa23.05■■□□□ 1.28
CIRBP-203ENST00000444172 PDIA6Q15084 440 aa23.05■■□□□ 1.28
CIRBP-203ENST00000444172 PROSER3Q2NL68 480 aa23.05■■□□□ 1.28
CIRBP-203ENST00000444172 DBF4Q9UBU7 674 aaPredicted RBP23.05■■□□□ 1.28
CIRBP-203ENST00000444172 TBC1D2BQ9UPU7 963 aa23.05■■□□□ 1.28
CIRBP-203ENST00000444172 DDX21Q9NR30 783 aaKnown RBP eCLIP23.04■■□□□ 1.28
CIRBP-203ENST00000444172 ZBTB7AO95365 584 aa23.03■■□□□ 1.28
CIRBP-203ENST00000444172 DZIP3Q86Y13 1208 aaKnown RBP23.03■■□□□ 1.28
CIRBP-203ENST00000444172 STK31Q9BXU1 1019 aa23.03■■□□□ 1.28
CIRBP-203ENST00000444172 SRP68Q9UHB9 627 aaKnown RBP23.03■■□□□ 1.28
CIRBP-203ENST00000444172 CASZ1Q86V15 1759 aa23.02■■□□□ 1.28
CIRBP-203ENST00000444172 AIMP1Q12904 312 aaKnown RBP23.02■■□□□ 1.28
CIRBP-203ENST00000444172 USPL1Q5W0Q7 1092 aa23.02■■□□□ 1.28
CIRBP-203ENST00000444172 C4AP0C0L4 1744 aa23.02■■□□□ 1.28
CIRBP-203ENST00000444172 SLC16A10Q8TF71 515 aa23.01■■□□□ 1.27
CIRBP-203ENST00000444172 HYPKQ9NX55 129 aa23.01■■□□□ 1.27
CIRBP-203ENST00000444172 NARFQ9UHQ1 456 aa23.01■■□□□ 1.27
CIRBP-203ENST00000444172 ATF5Q9Y2D1 282 aaPredicted RBP23.01■■□□□ 1.27
CIRBP-203ENST00000444172 MSL1Q68DK7 614 aa23■■□□□ 1.27
CIRBP-203ENST00000444172 COPS6Q7L5N1 327 aa23■■□□□ 1.27
CIRBP-203ENST00000444172 USP42Q9H9J4 1324 aaKnown RBP23■■□□□ 1.27
CIRBP-203ENST00000444172 SLC4A2P04920 1241 aa22.99■■□□□ 1.27
CIRBP-203ENST00000444172 KIF6Q6ZMV9 814 aa22.99■■□□□ 1.27
CIRBP-203ENST00000444172 XAGE3Q8WTP9 111 aa22.99■■□□□ 1.27
CIRBP-203ENST00000444172 TTLL7Q6ZT98 887 aa22.98■■□□□ 1.27
CIRBP-203ENST00000444172 LRP10Q7Z4F1 713 aa22.98■■□□□ 1.27
CIRBP-203ENST00000444172 MTFR1LQ9H019 292 aa22.98■■□□□ 1.27
CIRBP-203ENST00000444172 PHAXQ9H814 394 aaKnown RBP22.98■■□□□ 1.27
CIRBP-203ENST00000444172 GYS1P13807 737 aa22.97■■□□□ 1.27
CIRBP-203ENST00000444172 CAMTA2O94983 1202 aa22.96■■□□□ 1.27
CIRBP-203ENST00000444172 ZBTB3Q9H5J0 574 aa22.96■■□□□ 1.27
CIRBP-203ENST00000444172 NLGN1Q8N2Q7 840 aa22.95■■□□□ 1.26
CIRBP-203ENST00000444172 CACNA1FO60840 1977 aa22.94■■□□□ 1.26
CIRBP-203ENST00000444172 MAP3K15Q6ZN16 1313 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms