RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 DCTN1Q14203 1278 aa24.93■■□□□ 1.58
ATPAF2-201ENST00000444058 TAF7Q15545 349 aaPredicted RBP24.93■■□□□ 1.58
ATPAF2-201ENST00000444058 PRKRIP1Q9H875 184 aaPredicted RBP24.93■■□□□ 1.58
ATPAF2-201ENST00000444058 SRP68Q9UHB9 627 aaKnown RBP24.93■■□□□ 1.58
ATPAF2-201ENST00000444058 NARFQ9UHQ1 456 aa24.93■■□□□ 1.58
ATPAF2-201ENST00000444058 COL15A1P39059 1388 aa24.93■■□□□ 1.58
ATPAF2-201ENST00000444058 PARP3Q9Y6F1 533 aa24.92■■□□□ 1.58
ATPAF2-201ENST00000444058 KCNQ3O43525 872 aa24.91■■□□□ 1.58
ATPAF2-201ENST00000444058 EIF5P55010 431 aaKnown RBP24.91■■□□□ 1.58
ATPAF2-201ENST00000444058 FKBP8Q14318 412 aa24.91■■□□□ 1.58
ATPAF2-201ENST00000444058 A0A087WZG4 1122 aa24.9■■□□□ 1.58
ATPAF2-201ENST00000444058 PNISRQ8TF01 805 aaKnown RBP24.9■■□□□ 1.58
ATPAF2-201ENST00000444058 CANXP27824 592 aaKnown RBP24.89■■□□□ 1.58
ATPAF2-201ENST00000444058 TGFB2P61812 414 aa24.89■■□□□ 1.58
ATPAF2-201ENST00000444058 USPL1Q5W0Q7 1092 aa24.89■■□□□ 1.58
ATPAF2-201ENST00000444058 PELP1Q8IZL8 1130 aaKnown RBP24.89■■□□□ 1.58
ATPAF2-201ENST00000444058 C10orf71Q711Q0 1435 aa24.88■■□□□ 1.57
ATPAF2-201ENST00000444058 SNRPA1P09661 255 aaKnown RBP24.88■■□□□ 1.57
ATPAF2-201ENST00000444058 YBX3P16989 372 aaKnown RBP eCLIP24.88■■□□□ 1.57
ATPAF2-201ENST00000444058 TM4SF1P30408 202 aa24.88■■□□□ 1.57
ATPAF2-201ENST00000444058 IL6STP40189 918 aaPredicted RBP24.88■■□□□ 1.57
ATPAF2-201ENST00000444058 KIF13BQ9NQT8 1826 aa24.87■■□□□ 1.57
ATPAF2-201ENST00000444058 DLG5Q8TDM6 1919 aa24.85■■□□□ 1.57
ATPAF2-201ENST00000444058 DDR1Q08345 913 aa24.85■■□□□ 1.57
ATPAF2-201ENST00000444058 GOLGB1Q14789 3259 aaKnown RBP24.85■■□□□ 1.57
ATPAF2-201ENST00000444058 CHD4Q14839 1912 aa24.84■■□□□ 1.57
ATPAF2-201ENST00000444058 BCL2L12Q9HB09 334 aa24.84■■□□□ 1.57
ATPAF2-201ENST00000444058 USP16Q9Y5T5 823 aa24.84■■□□□ 1.57
ATPAF2-201ENST00000444058 POLRMTO00411 1230 aaKnown RBP24.83■■□□□ 1.57
ATPAF2-201ENST00000444058 A1BGP04217 495 aa24.83■■□□□ 1.57
ATPAF2-201ENST00000444058 WDR43Q15061 677 aaKnown RBP eCLIP24.83■■□□□ 1.57
ATPAF2-201ENST00000444058 PXDNLA1KZ92 1463 aa24.83■■□□□ 1.56
ATPAF2-201ENST00000444058 RIPK4P57078 832 aa24.82■■□□□ 1.56
ATPAF2-201ENST00000444058 LMOD3Q0VAK6 560 aa24.82■■□□□ 1.56
ATPAF2-201ENST00000444058 NPM2Q86SE8 214 aaKnown RBP24.82■■□□□ 1.56
ATPAF2-201ENST00000444058 TMPOP42166 694 aaKnown RBP24.81■■□□□ 1.56
ATPAF2-201ENST00000444058 NFIXQ14938 502 aa24.81■■□□□ 1.56
ATPAF2-201ENST00000444058 MIS18AQ9NYP9 233 aa24.81■■□□□ 1.56
ATPAF2-201ENST00000444058 RUNDC1Q96C34 613 aa24.8■■□□□ 1.56
ATPAF2-201ENST00000444058 BABAM1Q9NWV8 329 aa24.8■■□□□ 1.56
ATPAF2-201ENST00000444058 PRAMEF22A3QJZ6 481 aa24.79■■□□□ 1.56
ATPAF2-201ENST00000444058 THUMPD2Q9BTF0 503 aaKnown RBP24.79■■□□□ 1.56
ATPAF2-201ENST00000444058 KIAA1551Q9HCM1 1747 aa24.78■■□□□ 1.56
ATPAF2-201ENST00000444058 ZNF316A6NFI3 1004 aaPredicted RBP24.78■■□□□ 1.56
ATPAF2-201ENST00000444058 ADAMTS8Q9UP79 889 aa24.78■■□□□ 1.56
ATPAF2-201ENST00000444058 KDM3BQ7LBC6 1761 aa24.77■■□□□ 1.56
ATPAF2-201ENST00000444058 A0A0G2JLW4 131 aa24.77■■□□□ 1.56
ATPAF2-201ENST00000444058 EIF4A1P60842 406 aaKnown RBP24.77■■□□□ 1.56
ATPAF2-201ENST00000444058 TBC1D2BQ9UPU7 963 aa24.77■■□□□ 1.56
ATPAF2-201ENST00000444058 ZNF330Q9Y3S2 320 aaPredicted RBP24.77■■□□□ 1.56
ATPAF2-201ENST00000444058 RGL2O15211 777 aa24.76■■□□□ 1.55
ATPAF2-201ENST00000444058 GIGYF1O75420 1035 aaPredicted RBP24.76■■□□□ 1.55
ATPAF2-201ENST00000444058 DPEP1P16444 411 aa24.76■■□□□ 1.55
ATPAF2-201ENST00000444058 SERPINB2P05120 415 aa24.75■■□□□ 1.55
ATPAF2-201ENST00000444058 CCDC146Q8IYE0 955 aa24.75■■□□□ 1.55
ATPAF2-201ENST00000444058 ZNF784Q8NCA9 323 aaPredicted RBP24.75■■□□□ 1.55
ATPAF2-201ENST00000444058 CAMTA2O94983 1202 aa24.74■■□□□ 1.55
ATPAF2-201ENST00000444058 KCNA3P22001 575 aa24.74■■□□□ 1.55
ATPAF2-201ENST00000444058 DZIP3Q86Y13 1208 aaKnown RBP24.74■■□□□ 1.55
ATPAF2-201ENST00000444058 SCN7AQ01118 1682 aa24.74■■□□□ 1.55
ATPAF2-201ENST00000444058 NRXN2Q9P2S2 1712 aa24.74■■□□□ 1.55
ATPAF2-201ENST00000444058 NBPF26B4DH59 902 aa24.73■■□□□ 1.55
ATPAF2-201ENST00000444058 NBPF10Q6P3W6 841 aaKnown RBP24.73■■□□□ 1.55
ATPAF2-201ENST00000444058 CLEC4GQ6UXB4 293 aa24.73■■□□□ 1.55
ATPAF2-201ENST00000444058 NBPF15Q8N660 670 aa24.73■■□□□ 1.55
ATPAF2-201ENST00000444058 TBC1D9BQ66K14 1250 aa24.72■■□□□ 1.55
ATPAF2-201ENST00000444058 PIM2Q9P1W9 311 aa24.72■■□□□ 1.55
ATPAF2-201ENST00000444058 TSPYL4Q9UJ04 414 aa24.72■■□□□ 1.55
ATPAF2-201ENST00000444058 N4BP2Q86UW6 1770 aaPredicted RBP24.72■■□□□ 1.55
ATPAF2-201ENST00000444058 WWC3Q9ULE0 1092 aa24.71■■□□□ 1.55
ATPAF2-201ENST00000444058 RRP7AQ9Y3A4 280 aaKnown RBP24.71■■□□□ 1.55
ATPAF2-201ENST00000444058 LAMB4A4D0S4 1761 aa24.7■■□□□ 1.55
ATPAF2-201ENST00000444058 CARMIL3Q8ND23 1372 aa24.7■■□□□ 1.55
ATPAF2-201ENST00000444058 PIP4K2AP48426 406 aaPredicted RBP24.7■■□□□ 1.54
ATPAF2-201ENST00000444058 BICDL1Q6ZP65 573 aa24.7■■□□□ 1.54
ATPAF2-201ENST00000444058 BCS1LQ9Y276 419 aa24.7■■□□□ 1.54
ATPAF2-201ENST00000444058 NEUROD2Q15784 382 aa24.69■■□□□ 1.54
ATPAF2-201ENST00000444058 SETDB2Q96T68 719 aa24.69■■□□□ 1.54
ATPAF2-201ENST00000444058 TRIM35Q9UPQ4 493 aa24.69■■□□□ 1.54
ATPAF2-201ENST00000444058 ZNF652Q9Y2D9 606 aa24.69■■□□□ 1.54
ATPAF2-201ENST00000444058 AFDNP55196 1824 aaKnown RBP24.68■■□□□ 1.54
ATPAF2-201ENST00000444058 ERBB4Q15303 1308 aa24.68■■□□□ 1.54
ATPAF2-201ENST00000444058 BRCA1P38398 1863 aaKnown RBP24.68■■□□□ 1.54
ATPAF2-201ENST00000444058 DALRD3Q5D0E6 543 aaKnown RBP24.67■■□□□ 1.54
ATPAF2-201ENST00000444058 PDZRN3Q9UPQ7 1066 aa24.67■■□□□ 1.54
ATPAF2-201ENST00000444058 BCORQ6W2J9 1755 aa24.67■■□□□ 1.54
ATPAF2-201ENST00000444058 CHL1O00533 1208 aa24.66■■□□□ 1.54
ATPAF2-201ENST00000444058 CHRNA5P30532 468 aa24.66■■□□□ 1.54
ATPAF2-201ENST00000444058 BRIP1Q9BX63 1249 aa24.65■■□□□ 1.54
ATPAF2-201ENST00000444058 PRR5LQ6MZQ0 368 aa24.64■■□□□ 1.54
ATPAF2-201ENST00000444058 ERVV-1B6SEH8 477 aa24.63■■□□□ 1.53
ATPAF2-201ENST00000444058 H0YIN7 160 aa24.62■■□□□ 1.53
ATPAF2-201ENST00000444058 PDE6BP35913 854 aa24.62■■□□□ 1.53
ATPAF2-201ENST00000444058 CNBD1Q8NA66 436 aa24.62■■□□□ 1.53
ATPAF2-201ENST00000444058 ADCY9O60503 1353 aa24.62■■□□□ 1.53
ATPAF2-201ENST00000444058 ARFGEF1Q9Y6D6 1849 aa24.61■■□□□ 1.53
ATPAF2-201ENST00000444058 ANP32CO43423 234 aa24.61■■□□□ 1.53
ATPAF2-201ENST00000444058 APAF1O14727 1248 aa24.6■■□□□ 1.53
ATPAF2-201ENST00000444058 ARHGAP27Q6ZUM4 889 aa24.6■■□□□ 1.53
ATPAF2-201ENST00000444058 C2CD5Q86YS7 1000 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms